RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 PODXL2Q9NZ53 605 aa12.07□□□□□ -0.48
COL6A4P1-204ENST00000508169 DEPDC4Q8N2C3 294 aa12.06□□□□□ -0.48
COL6A4P1-204ENST00000508169 KCTD17Q8N5Z5 321 aa12.06□□□□□ -0.48
COL6A4P1-204ENST00000508169 MAP7D1Q3KQU3 841 aa12.05□□□□□ -0.48
COL6A4P1-204ENST00000508169 C1QTNF2Q9BXJ5 285 aa12.05□□□□□ -0.48
COL6A4P1-204ENST00000508169 LZTS3O60299 673 aaPredicted RBP12.04□□□□□ -0.48
COL6A4P1-204ENST00000508169 TRIM32Q13049 653 aa12.04□□□□□ -0.48
COL6A4P1-204ENST00000508169 NCOA4Q13772 614 aa12.04□□□□□ -0.48
COL6A4P1-204ENST00000508169 PLA2G2CQ5R387 149 aa12.04□□□□□ -0.48
COL6A4P1-204ENST00000508169 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
COL6A4P1-204ENST00000508169 PPP1R18Q6NYC8 613 aa12.03□□□□□ -0.48
COL6A4P1-204ENST00000508169 GIGYF1O75420 1035 aaPredicted RBP12.02□□□□□ -0.49
COL6A4P1-204ENST00000508169 NBPF20Q3BBV1 942 aa12.02□□□□□ -0.49
COL6A4P1-204ENST00000508169 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
COL6A4P1-204ENST00000508169 TRMT44Q8IYL2 757 aaKnown RBP12.02□□□□□ -0.49
COL6A4P1-204ENST00000508169 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.02□□□□□ -0.49
COL6A4P1-204ENST00000508169 MKRN1Q9UHC7 482 aaKnown RBP12.02□□□□□ -0.49
COL6A4P1-204ENST00000508169 ELOAQ14241 798 aaKnown RBP12.01□□□□□ -0.49
COL6A4P1-204ENST00000508169 EML3Q32P44 896 aa12.01□□□□□ -0.49
COL6A4P1-204ENST00000508169 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
COL6A4P1-204ENST00000508169 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
COL6A4P1-204ENST00000508169 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
COL6A4P1-204ENST00000508169 DOLKQ9UPQ8 538 aa12.01□□□□□ -0.49
COL6A4P1-204ENST00000508169 ATP5J2-PTCD1G3V325 749 aa12□□□□□ -0.49
COL6A4P1-204ENST00000508169 WNT7BP56706 349 aa12□□□□□ -0.49
COL6A4P1-204ENST00000508169 CCDC85AQ96PX6 553 aaPredicted RBP12□□□□□ -0.49
COL6A4P1-204ENST00000508169 FAM196BA6NMK8 535 aa11.99□□□□□ -0.49
COL6A4P1-204ENST00000508169 RPIAP49247 311 aa11.99□□□□□ -0.49
COL6A4P1-204ENST00000508169 TSGA10IPQ3SY00 556 aa11.99□□□□□ -0.49
COL6A4P1-204ENST00000508169 NOVA2Q9UNW9 492 aaKnown RBP11.99□□□□□ -0.49
COL6A4P1-204ENST00000508169 CARNS1A5YM72 827 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L10C9JJH3 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L12C9JPN9 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L21D6R901 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L20D6RJB6 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 VARSP26640 1264 aaKnown RBP11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 SKOR1P84550 965 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 USP17L24Q0WX57 530 aa11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 LARP1Q6PKG0 1096 aaKnown RBP11.98□□□□□ -0.49
COL6A4P1-204ENST00000508169 TMEM88BA6NKF7 163 aa11.97□□□□□ -0.49
COL6A4P1-204ENST00000508169 ZMIZ1Q9ULJ6 1067 aa11.97□□□□□ -0.49
COL6A4P1-204ENST00000508169 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
COL6A4P1-204ENST00000508169 ESPNB1AK53 854 aa11.96□□□□□ -0.49
COL6A4P1-204ENST00000508169 RASA1P20936 1047 aa11.96□□□□□ -0.49
COL6A4P1-204ENST00000508169 CRTC2Q53ET0 693 aaPredicted RBP11.96□□□□□ -0.49
COL6A4P1-204ENST00000508169 OXLD1Q5BKU9 147 aa11.96□□□□□ -0.49
COL6A4P1-204ENST00000508169 SEPT12Q8IYM1 358 aa11.96□□□□□ -0.49
COL6A4P1-204ENST00000508169 TRIM50Q86XT4 487 aa11.95□□□□□ -0.5
COL6A4P1-204ENST00000508169 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
COL6A4P1-204ENST00000508169 BRD1O95696 1058 aa11.94□□□□□ -0.5
COL6A4P1-204ENST00000508169 PTK7Q13308 1070 aa11.94□□□□□ -0.5
COL6A4P1-204ENST00000508169 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
COL6A4P1-204ENST00000508169 EHBP1Q8NDI1 1231 aa11.94□□□□□ -0.5
COL6A4P1-204ENST00000508169 STK32AQ8WU08 396 aa11.94□□□□□ -0.5
COL6A4P1-204ENST00000508169 KCTD15Q96SI1 283 aaPredicted RBP11.94□□□□□ -0.5
COL6A4P1-204ENST00000508169 MAP4K5Q9Y4K4 846 aa11.94□□□□□ -0.5
COL6A4P1-204ENST00000508169 ATP1A2P50993 1020 aa11.93□□□□□ -0.5
COL6A4P1-204ENST00000508169 TMEM164Q5U3C3 297 aa11.93□□□□□ -0.5
COL6A4P1-204ENST00000508169 OGFOD1Q8N543 542 aa11.93□□□□□ -0.5
COL6A4P1-204ENST00000508169 PCDHB11Q9Y5F2 797 aa11.93□□□□□ -0.5
COL6A4P1-204ENST00000508169 VASH1Q7L8A9 365 aaPredicted RBP11.92□□□□□ -0.5
COL6A4P1-204ENST00000508169 PATL2C9JE40 543 aaKnown RBP11.91□□□□□ -0.5
COL6A4P1-204ENST00000508169 RAB15P59190 212 aa11.91□□□□□ -0.5
COL6A4P1-204ENST00000508169 CDCA7Q9BWT1 371 aaPredicted RBP11.91□□□□□ -0.5
COL6A4P1-204ENST00000508169 DNAAF2Q9NVR5 837 aaKnown RBP11.91□□□□□ -0.5
COL6A4P1-204ENST00000508169 CLDN10P78369 228 aa11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 KCNA1Q09470 495 aa11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 ANKMY2Q8IV38 441 aa11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 FAM200AQ8TCP9 573 aa11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 SIRT1Q96EB6 747 aa11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 ZNF594Q96JF6 807 aaPredicted RBP11.9□□□□□ -0.5
COL6A4P1-204ENST00000508169 GTF2IP78347 998 aa11.89□□□□□ -0.51
COL6A4P1-204ENST00000508169 USP4Q13107 963 aa11.89□□□□□ -0.51
COL6A4P1-204ENST00000508169 ARID5BQ14865 1188 aa11.88□□□□□ -0.51
COL6A4P1-204ENST00000508169 INTS6LQ5JSJ4 861 aaKnown RBP11.88□□□□□ -0.51
COL6A4P1-204ENST00000508169 IFFO2Q5TF58 517 aa11.88□□□□□ -0.51
COL6A4P1-204ENST00000508169 LARGE2Q8N3Y3 721 aa11.88□□□□□ -0.51
COL6A4P1-204ENST00000508169 DPYDQ12882 1025 aa11.87□□□□□ -0.51
COL6A4P1-204ENST00000508169 B4GALNT3Q6L9W6 998 aa11.87□□□□□ -0.51
COL6A4P1-204ENST00000508169 EMID1Q96A84 441 aaPredicted RBP11.87□□□□□ -0.51
COL6A4P1-204ENST00000508169 SIX5Q8N196 739 aa11.86□□□□□ -0.51
COL6A4P1-204ENST00000508169 CDK15Q96Q40 435 aa11.86□□□□□ -0.51
COL6A4P1-204ENST00000508169 KIAA1024Q9UPX6 916 aa11.86□□□□□ -0.51
COL6A4P1-204ENST00000508169 MYCP01106 439 aaPredicted RBP11.85□□□□□ -0.51
COL6A4P1-204ENST00000508169 TLL2Q9Y6L7 1015 aa11.85□□□□□ -0.51
COL6A4P1-204ENST00000508169 ERVH48-1M5A8F1 160 aa11.84□□□□□ -0.51
COL6A4P1-204ENST00000508169 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
COL6A4P1-204ENST00000508169 FSHRP23945 695 aa11.84□□□□□ -0.51
COL6A4P1-204ENST00000508169 SLC19A1P41440 591 aa11.84□□□□□ -0.51
COL6A4P1-204ENST00000508169 PSME1Q06323 249 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms