RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 NUDT16Q96DE0 195 aaKnown RBP13.52□□□□□ -0.25
CAST-220ENST00000508117 SBF2Q86WG5 1849 aa13.52□□□□□ -0.25
CAST-220ENST00000508117 OVOS2A0A0G2JMS6 1433 aa13.51□□□□□ -0.25
CAST-220ENST00000508117 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
CAST-220ENST00000508117 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
CAST-220ENST00000508117 ARHGEF28Q8N1W1 1705 aaKnown RBP13.5□□□□□ -0.25
CAST-220ENST00000508117 TOPAZ1Q8N9V7 1692 aa13.5□□□□□ -0.25
CAST-220ENST00000508117 USP19O94966 1318 aa13.5□□□□□ -0.25
CAST-220ENST00000508117 PLEKHG3A1L390 1219 aa13.49□□□□□ -0.25
CAST-220ENST00000508117 PITPNM1O00562 1244 aa13.49□□□□□ -0.25
CAST-220ENST00000508117 ZNF784Q8NCA9 323 aaPredicted RBP13.49□□□□□ -0.25
CAST-220ENST00000508117 CHD4Q14839 1912 aa13.49□□□□□ -0.25
CAST-220ENST00000508117 COL5A2P05997 1499 aaPredicted RBP13.48□□□□□ -0.25
CAST-220ENST00000508117 BCL9O00512 1426 aa13.48□□□□□ -0.25
CAST-220ENST00000508117 ACEP12821 1306 aa13.48□□□□□ -0.25
CAST-220ENST00000508117 NUTM2GQ5VZR2 741 aa13.48□□□□□ -0.25
CAST-220ENST00000508117 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
CAST-220ENST00000508117 CRB1P82279 1406 aa13.47□□□□□ -0.25
CAST-220ENST00000508117 ABTB2Q8N961 1025 aa13.47□□□□□ -0.25
CAST-220ENST00000508117 BCL11BQ9C0K0 894 aaPredicted RBP13.47□□□□□ -0.25
CAST-220ENST00000508117 ANO8Q9HCE9 1232 aaPredicted RBP13.47□□□□□ -0.25
CAST-220ENST00000508117 PTGER2P43116 358 aa13.46□□□□□ -0.25
CAST-220ENST00000508117 NLRP13Q86W25 1043 aa13.46□□□□□ -0.25
CAST-220ENST00000508117 MYOM1P52179 1685 aa13.46□□□□□ -0.26
CAST-220ENST00000508117 LRRC37A3O60309 1634 aa13.46□□□□□ -0.26
CAST-220ENST00000508117 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
CAST-220ENST00000508117 GCP02774 474 aa13.45□□□□□ -0.26
CAST-220ENST00000508117 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
CAST-220ENST00000508117 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
CAST-220ENST00000508117 DDB1Q16531 1140 aa13.44□□□□□ -0.26
CAST-220ENST00000508117 PROM2Q8N271 834 aa13.44□□□□□ -0.26
CAST-220ENST00000508117 DCAF11Q8TEB1 546 aa13.44□□□□□ -0.26
CAST-220ENST00000508117 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
CAST-220ENST00000508117 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
CAST-220ENST00000508117 WNK3Q9BYP7 1800 aa13.43□□□□□ -0.26
CAST-220ENST00000508117 C1QTNF8P60827 252 aa13.42□□□□□ -0.26
CAST-220ENST00000508117 PIP4P2Q8N4L2 257 aa13.42□□□□□ -0.26
CAST-220ENST00000508117 SYT17Q9BSW7 474 aa13.42□□□□□ -0.26
CAST-220ENST00000508117 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
CAST-220ENST00000508117 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
CAST-220ENST00000508117 UTRNP46939 3433 aa13.42□□□□□ -0.26
CAST-220ENST00000508117 AKAP12Q02952 1782 aa13.41□□□□□ -0.26
CAST-220ENST00000508117 ZBTB7AO95365 584 aa13.41□□□□□ -0.26
CAST-220ENST00000508117 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
CAST-220ENST00000508117 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
CAST-220ENST00000508117 SLIT3O75094 1523 aa13.4□□□□□ -0.26
CAST-220ENST00000508117 SENP3-EIF4A1A0A087X0R7 540 aa13.4□□□□□ -0.26
CAST-220ENST00000508117 SLC15A2Q16348 729 aa13.4□□□□□ -0.26
CAST-220ENST00000508117 FHDC1Q9C0D6 1143 aaPredicted RBP13.4□□□□□ -0.26
CAST-220ENST00000508117 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
CAST-220ENST00000508117 STK32BQ9NY57 414 aa13.4□□□□□ -0.26
CAST-220ENST00000508117 COL18A1P39060 1754 aa13.4□□□□□ -0.26
CAST-220ENST00000508117 TXNRD1Q16881 649 aa13.39□□□□□ -0.27
CAST-220ENST00000508117 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
CAST-220ENST00000508117 MARCH10Q8NA82 808 aaPredicted RBP13.39□□□□□ -0.27
CAST-220ENST00000508117 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
CAST-220ENST00000508117 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
CAST-220ENST00000508117 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
CAST-220ENST00000508117 TOM1L2Q6ZVM7 507 aa13.38□□□□□ -0.27
CAST-220ENST00000508117 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
CAST-220ENST00000508117 SSUH2Q9Y2M2 353 aa13.36□□□□□ -0.27
CAST-220ENST00000508117 USP6P35125 1406 aa13.36□□□□□ -0.27
CAST-220ENST00000508117 NLRP6P59044 892 aa13.35□□□□□ -0.27
CAST-220ENST00000508117 RAB3GAP2Q9H2M9 1393 aa13.34□□□□□ -0.27
CAST-220ENST00000508117 ARXQ96QS3 562 aa13.34□□□□□ -0.27
CAST-220ENST00000508117 CARD10Q9BWT7 1032 aa13.34□□□□□ -0.27
CAST-220ENST00000508117 CLEC11AQ9Y240 323 aa13.34□□□□□ -0.27
CAST-220ENST00000508117 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
CAST-220ENST00000508117 PAPPAQ13219 1627 aa13.34□□□□□ -0.27
CAST-220ENST00000508117 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
CAST-220ENST00000508117 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.285e-6■□□□□ 9.5
CAST-220ENST00000508117 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
CAST-220ENST00000508117 SPDYE1Q8NFV5 336 aaPredicted RBP13.33□□□□□ -0.28
CAST-220ENST00000508117 NHSQ6T4R5 1651 aa13.33□□□□□ -0.28
CAST-220ENST00000508117 TRPM1Q7Z4N2 1603 aa13.32□□□□□ -0.28
CAST-220ENST00000508117 PIK3C2AO00443 1686 aa13.32□□□□□ -0.28
CAST-220ENST00000508117 EXOC5O00471 708 aa13.32□□□□□ -0.28
CAST-220ENST00000508117 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
CAST-220ENST00000508117 ABCC6O95255 1503 aa13.32□□□□□ -0.28
CAST-220ENST00000508117 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
CAST-220ENST00000508117 TNS2Q63HR2 1409 aa13.31□□□□□ -0.28
CAST-220ENST00000508117 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
CAST-220ENST00000508117 RGPD5Q99666 1765 aa13.31□□□□□ -0.28
CAST-220ENST00000508117 KCNH5Q8NCM2 988 aa13.31□□□□□ -0.28
CAST-220ENST00000508117 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
CAST-220ENST00000508117 ZBTB7CA1YPR0 619 aa13.3□□□□□ -0.28
CAST-220ENST00000508117 GIGYF1O75420 1035 aaPredicted RBP13.3□□□□□ -0.28
CAST-220ENST00000508117 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
CAST-220ENST00000508117 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
CAST-220ENST00000508117 CENPJQ9HC77 1338 aaPredicted RBP13.3□□□□□ -0.28
CAST-220ENST00000508117 QSER1Q2KHR3 1735 aa13.3□□□□□ -0.28
CAST-220ENST00000508117 SLC16A10Q8TF71 515 aa13.29□□□□□ -0.28
CAST-220ENST00000508117 GPR162Q16538 588 aa13.28□□□□□ -0.28
CAST-220ENST00000508117 CSB-PGBD3P0DP91 1061 aa13.27□□□□□ -0.29
CAST-220ENST00000508117 NBPF1Q3BBV0 1214 aa13.27□□□□□ -0.29
CAST-220ENST00000508117 CEP350Q5VT06 3117 aa13.27□□□□□ -0.29
CAST-220ENST00000508117 BTAF1O14981 1849 aa13.26□□□□□ -0.29
CAST-220ENST00000508117 NFAT5O94916 1531 aa13.26□□□□□ -0.29
CAST-220ENST00000508117 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
CAST-220ENST00000508117 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms