RNA–Protein interactions for RNA: ENST00000507968.1

SSBP2-209, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-209ENST00000507968 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
SSBP2-209ENST00000507968 ROBO1Q9Y6N7 1651 aa14.26□□□□□ -0.13
SSBP2-209ENST00000507968 NHSL1Q5SYE7 1610 aa14.26□□□□□ -0.13
SSBP2-209ENST00000507968 COL3A1P02461 1466 aaPredicted RBP14.25□□□□□ -0.13
SSBP2-209ENST00000507968 EYA1Q99502 592 aa14.25□□□□□ -0.13
SSBP2-209ENST00000507968 PRDM11Q9NQV5 511 aa14.25□□□□□ -0.13
SSBP2-209ENST00000507968 AXIN2Q9Y2T1 843 aa14.25□□□□□ -0.13
SSBP2-209ENST00000507968 ALS2Q96Q42 1657 aa14.25□□□□□ -0.13
SSBP2-209ENST00000507968 NFAT5O94916 1531 aa14.25□□□□□ -0.13
SSBP2-209ENST00000507968 BLMP54132 1417 aaPredicted RBP14.24□□□□□ -0.13
SSBP2-209ENST00000507968 ANKRD24Q8TF21 1146 aa14.24□□□□□ -0.13
SSBP2-209ENST00000507968 LTV1Q96GA3 475 aaPredicted RBP14.24□□□□□ -0.13
SSBP2-209ENST00000507968 PLEKHF1Q96S99 279 aa14.24□□□□□ -0.13
SSBP2-209ENST00000507968 KIAA0232Q92628 1395 aa14.23□□□□□ -0.13
SSBP2-209ENST00000507968 MED1Q15648 1581 aaPredicted RBP14.23□□□□□ -0.13
SSBP2-209ENST00000507968 FAM83GA6ND36 823 aa14.23□□□□□ -0.13
SSBP2-209ENST00000507968 APAF1O14727 1248 aa14.23□□□□□ -0.13
SSBP2-209ENST00000507968 SULT6B1Q6IMI4 303 aa14.23□□□□□ -0.13
SSBP2-209ENST00000507968 CCDC146Q8IYE0 955 aa14.23□□□□□ -0.13
SSBP2-209ENST00000507968 RSPH6AQ9H0K4 717 aa14.23□□□□□ -0.13
SSBP2-209ENST00000507968 JCADQ9P266 1359 aa14.22□□□□□ -0.13
SSBP2-209ENST00000507968 IGSF1Q8N6C5 1336 aa14.22□□□□□ -0.13
SSBP2-209ENST00000507968 MAPK8IP3Q9UPT6 1336 aa14.22□□□□□ -0.13
SSBP2-209ENST00000507968 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
SSBP2-209ENST00000507968 HMOX1P09601 288 aa14.22□□□□□ -0.13
SSBP2-209ENST00000507968 CHRNA2Q15822 529 aa14.22□□□□□ -0.13
SSBP2-209ENST00000507968 ZBED9Q6R2W3 1325 aa14.21□□□□□ -0.13
SSBP2-209ENST00000507968 PRKAR2BP31323 418 aa14.21□□□□□ -0.13
SSBP2-209ENST00000507968 EVA1CP58658 441 aa14.21□□□□□ -0.13
SSBP2-209ENST00000507968 NBPF6Q5VWK0 638 aa14.21□□□□□ -0.13
SSBP2-209ENST00000507968 TCP11L2Q8N4U5 519 aa14.21□□□□□ -0.13
SSBP2-209ENST00000507968 NBPF4Q96M43 638 aa14.21□□□□□ -0.13
SSBP2-209ENST00000507968 SPATA31A6Q5VVP1 1343 aa14.2□□□□□ -0.14
SSBP2-209ENST00000507968 CSB-PGBD3P0DP91 1061 aa14.2□□□□□ -0.14
SSBP2-209ENST00000507968 HSPA1LP34931 641 aa14.2□□□□□ -0.14
SSBP2-209ENST00000507968 PDE3BQ13370 1112 aa14.2□□□□□ -0.14
SSBP2-209ENST00000507968 ERBB3P21860 1342 aa14.19□□□□□ -0.14
SSBP2-209ENST00000507968 CCDC27Q2M243 656 aa14.19□□□□□ -0.14
SSBP2-209ENST00000507968 MAP2P11137 1827 aaKnown RBP14.19□□□□□ -0.14
SSBP2-209ENST00000507968 NUTM2BA6NNL0 878 aaPredicted RBP14.18□□□□□ -0.14
SSBP2-209ENST00000507968 NUTM2EB1AL46 878 aaPredicted RBP14.18□□□□□ -0.14
SSBP2-209ENST00000507968 TMPOP42166 694 aaKnown RBP14.18□□□□□ -0.14
SSBP2-209ENST00000507968 NUTM2AQ8IVF1 878 aaPredicted RBP14.18□□□□□ -0.14
SSBP2-209ENST00000507968 NLRP2Q9NX02 1062 aa14.18□□□□□ -0.14
SSBP2-209ENST00000507968 KDRP35968 1356 aa14.18□□□□□ -0.14
SSBP2-209ENST00000507968 ABCC6O95255 1503 aa14.17□□□□□ -0.14
SSBP2-209ENST00000507968 AEBP1Q8IUX7 1158 aa14.17□□□□□ -0.14
SSBP2-209ENST00000507968 MARF1Q9Y4F3 1742 aaKnown RBP14.17□□□□□ -0.14
SSBP2-209ENST00000507968 ADAMTS2O95450 1211 aa14.16□□□□□ -0.14
SSBP2-209ENST00000507968 RIPK4P57078 832 aa14.16□□□□□ -0.14
SSBP2-209ENST00000507968 NFE2L2Q16236 605 aa14.16□□□□□ -0.14
SSBP2-209ENST00000507968 PHACTR3Q96KR7 559 aa14.16□□□□□ -0.14
SSBP2-209ENST00000507968 BTG4Q9NY30 223 aa14.16□□□□□ -0.14
SSBP2-209ENST00000507968 SALL2Q9Y467 1007 aaPredicted RBP14.16□□□□□ -0.14
SSBP2-209ENST00000507968 WDR17Q8IZU2 1322 aa14.15□□□□□ -0.14
SSBP2-209ENST00000507968 COL16A1Q07092 1604 aaPredicted RBP14.15□□□□□ -0.14
SSBP2-209ENST00000507968 PHLPP1O60346 1717 aa14.15□□□□□ -0.14
SSBP2-209ENST00000507968 LMOD3Q0VAK6 560 aa14.15□□□□□ -0.14
SSBP2-209ENST00000507968 AMOTQ4VCS5 1084 aa14.15□□□□□ -0.14
SSBP2-209ENST00000507968 PLEKHO1Q53GL0 409 aaPredicted RBP14.15□□□□□ -0.14
SSBP2-209ENST00000507968 WDR63Q8IWG1 891 aa14.15□□□□□ -0.14
SSBP2-209ENST00000507968 GAS2L2Q8NHY3 880 aa14.15□□□□□ -0.14
SSBP2-209ENST00000507968 CARD10Q9BWT7 1032 aa14.15□□□□□ -0.14
SSBP2-209ENST00000507968 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
SSBP2-209ENST00000507968 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
SSBP2-209ENST00000507968 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
SSBP2-209ENST00000507968 TOM1L2Q6ZVM7 507 aa14.14□□□□□ -0.15
SSBP2-209ENST00000507968 RAPGEF4Q8WZA2 1011 aa14.14□□□□□ -0.15
SSBP2-209ENST00000507968 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
SSBP2-209ENST00000507968 COL22A1Q8NFW1 1626 aaPredicted RBP14.13□□□□□ -0.15
SSBP2-209ENST00000507968 HTATSF1O43719 755 aaKnown RBP14.13□□□□□ -0.15
SSBP2-209ENST00000507968 GOLGA2Q08379 1002 aa14.13□□□□□ -0.15
SSBP2-209ENST00000507968 WWC1Q8IX03 1113 aa14.13□□□□□ -0.15
SSBP2-209ENST00000507968 USHBP1Q8N6Y0 703 aa14.13□□□□□ -0.15
SSBP2-209ENST00000507968 STRN4Q9NRL3 753 aa14.13□□□□□ -0.15
SSBP2-209ENST00000507968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.13□□□□□ -0.15
SSBP2-209ENST00000507968 SHPRHQ149N8 1683 aa14.12□□□□□ -0.15
SSBP2-209ENST00000507968 TATP17735 454 aaPredicted RBP14.12□□□□□ -0.15
SSBP2-209ENST00000507968 CALD1Q05682 793 aaKnown RBP14.12□□□□□ -0.15
SSBP2-209ENST00000507968 NGLY1Q96IV0 654 aa14.12□□□□□ -0.15
SSBP2-209ENST00000507968 RRP7AQ9Y3A4 280 aaKnown RBP14.12□□□□□ -0.15
SSBP2-209ENST00000507968 ZNF521Q96K83 1311 aa14.12□□□□□ -0.15
SSBP2-209ENST00000507968 PLEKHG2Q9H7P9 1386 aa14.11□□□□□ -0.15
SSBP2-209ENST00000507968 MTHFSDQ2M296 383 aaKnown RBP14.11□□□□□ -0.15
SSBP2-209ENST00000507968 LARP1Q6PKG0 1096 aaKnown RBP14.11□□□□□ -0.15
SSBP2-209ENST00000507968 FNBP4Q8N3X1 1017 aaPredicted RBP14.11□□□□□ -0.15
SSBP2-209ENST00000507968 CAMTA1Q9Y6Y1 1673 aa14.1□□□□□ -0.15
SSBP2-209ENST00000507968 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
SSBP2-209ENST00000507968 SENP3-EIF4A1A0A087X0R7 540 aa14.1□□□□□ -0.15
SSBP2-209ENST00000507968 TRIM35Q9UPQ4 493 aa14.1□□□□□ -0.15
SSBP2-209ENST00000507968 SPG7Q9UQ90 795 aa14.1□□□□□ -0.15
SSBP2-209ENST00000507968 E9PSI1 815 aa14.09□□□□□ -0.15
SSBP2-209ENST00000507968 UNC5CLQ8IV45 518 aa14.09□□□□□ -0.15
SSBP2-209ENST00000507968 RTF1Q92541 710 aaKnown RBP14.09□□□□□ -0.15
SSBP2-209ENST00000507968 THRAP3Q9Y2W1 955 aaKnown RBP14.09□□□□□ -0.15
SSBP2-209ENST00000507968 IL16Q14005 1332 aa14.09□□□□□ -0.15
SSBP2-209ENST00000507968 COL5A2P05997 1499 aaPredicted RBP14.08□□□□□ -0.16
SSBP2-209ENST00000507968 CRYBG1Q9Y4K1 1723 aa14.08□□□□□ -0.16
SSBP2-209ENST00000507968 GNAT3A8MTJ3 354 aa14.08□□□□□ -0.16
SSBP2-209ENST00000507968 SLFN5Q08AF3 891 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms