RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 GGNBP2Q9H3C7 697 aa22.63■■□□□ 1.21
DDR1-261ENST00000507901 AXIN2Q9Y2T1 843 aa22.62■■□□□ 1.21
DDR1-261ENST00000507901 CGNL1Q0VF96 1302 aa22.6■■□□□ 1.21
DDR1-261ENST00000507901 SPATA31A5Q5VU36 1347 aa22.6■■□□□ 1.21
DDR1-261ENST00000507901 SPATA31A7Q8IWB4 1347 aa22.6■■□□□ 1.21
DDR1-261ENST00000507901 THSD7AQ9UPZ6 1657 aa22.59■■□□□ 1.21
DDR1-261ENST00000507901 SOX12O15370 315 aa22.59■■□□□ 1.21
DDR1-261ENST00000507901 PER1O15534 1290 aaPredicted RBP22.59■■□□□ 1.21
DDR1-261ENST00000507901 ONECUT3O60422 494 aaPredicted RBP22.59■■□□□ 1.21
DDR1-261ENST00000507901 PEAK1Q9H792 1746 aa22.57■■□□□ 1.2
DDR1-261ENST00000507901 NSD2O96028 1365 aa22.57■■□□□ 1.2
DDR1-261ENST00000507901 SPATA31A1Q5TZJ5 1347 aa22.57■■□□□ 1.2
DDR1-261ENST00000507901 FBLN1P23142 703 aa22.56■■□□□ 1.2
DDR1-261ENST00000507901 BRWD3Q6RI45 1802 aa22.56■■□□□ 1.2
DDR1-261ENST00000507901 MAP3K19Q56UN5 1328 aa22.56■■□□□ 1.2
DDR1-261ENST00000507901 AMER1Q5JTC6 1135 aaPredicted RBP22.55■■□□□ 1.2
DDR1-261ENST00000507901 LARP1Q6PKG0 1096 aaKnown RBP22.55■■□□□ 1.2
DDR1-261ENST00000507901 BLMP54132 1417 aaPredicted RBP22.55■■□□□ 1.2
DDR1-261ENST00000507901 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
DDR1-261ENST00000507901 RTL1A6NKG5 1358 aa22.54■■□□□ 1.2
DDR1-261ENST00000507901 CRB1P82279 1406 aa22.54■■□□□ 1.2
DDR1-261ENST00000507901 MAP2P11137 1827 aaKnown RBP22.54■■□□□ 1.2
DDR1-261ENST00000507901 STRN4Q9NRL3 753 aa22.53■■□□□ 1.2
DDR1-261ENST00000507901 CCDC9Q9Y3X0 531 aaKnown RBP22.53■■□□□ 1.2
DDR1-261ENST00000507901 WDR17Q8IZU2 1322 aa22.53■■□□□ 1.2
DDR1-261ENST00000507901 IP6K1Q92551 441 aa22.52■■□□□ 1.2
DDR1-261ENST00000507901 ERBB3P21860 1342 aa22.52■■□□□ 1.2
DDR1-261ENST00000507901 FAM208AQ9UK61 1670 aaKnown RBP22.52■■□□□ 1.2
DDR1-261ENST00000507901 KIF24Q5T7B8 1368 aa22.51■■□□□ 1.19
DDR1-261ENST00000507901 ZBTB7CA1YPR0 619 aa22.51■■□□□ 1.19
DDR1-261ENST00000507901 NPC1L1Q9UHC9 1359 aa22.5■■□□□ 1.19
DDR1-261ENST00000507901 RRS1Q15050 365 aaKnown RBP22.5■■□□□ 1.19
DDR1-261ENST00000507901 HOXC9P31274 260 aa22.49■■□□□ 1.19
DDR1-261ENST00000507901 EVA1CP58658 441 aa22.49■■□□□ 1.19
DDR1-261ENST00000507901 BARGINQ6ZT62 677 aa22.49■■□□□ 1.19
DDR1-261ENST00000507901 KNSTRNQ9Y448 316 aa22.49■■□□□ 1.19
DDR1-261ENST00000507901 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
DDR1-261ENST00000507901 PARP4Q9UKK3 1724 aaKnown RBP22.48■■□□□ 1.19
DDR1-261ENST00000507901 SEPT12Q8IYM1 358 aa22.47■■□□□ 1.19
DDR1-261ENST00000507901 THRAP3Q9Y2W1 955 aaKnown RBP22.47■■□□□ 1.19
DDR1-261ENST00000507901 RGPD2P0DJD1 1756 aa22.46■■□□□ 1.19
DDR1-261ENST00000507901 FAM98CQ17RN3 349 aaKnown RBP22.46■■□□□ 1.19
DDR1-261ENST00000507901 TCP11L2Q8N4U5 519 aa22.46■■□□□ 1.19
DDR1-261ENST00000507901 DISP2A7MBM2 1401 aa22.46■■□□□ 1.19
DDR1-261ENST00000507901 CCDC125Q86Z20 511 aa22.45■■□□□ 1.18
DDR1-261ENST00000507901 EMILIN1Q9Y6C2 1016 aa22.45■■□□□ 1.18
DDR1-261ENST00000507901 FLT4P35916 1363 aa22.45■■□□□ 1.18
DDR1-261ENST00000507901 INSRP06213 1382 aa22.44■■□□□ 1.18
DDR1-261ENST00000507901 ANKRD24Q8TF21 1146 aa22.44■■□□□ 1.18
DDR1-261ENST00000507901 CARD10Q9BWT7 1032 aa22.44■■□□□ 1.18
DDR1-261ENST00000507901 POLKQ9UBT6 870 aa22.44■■□□□ 1.18
DDR1-261ENST00000507901 LRRC37A3O60309 1634 aa22.43■■□□□ 1.18
DDR1-261ENST00000507901 EP400Q96L91 3159 aa22.43■■□□□ 1.18
DDR1-261ENST00000507901 AMPHP49418 695 aa22.43■■□□□ 1.18
DDR1-261ENST00000507901 TOM1L2Q6ZVM7 507 aa22.42■■□□□ 1.18
DDR1-261ENST00000507901 HSP90AB2PQ58FF8 381 aa22.41■■□□□ 1.18
DDR1-261ENST00000507901 USP35Q9P2H5 1018 aa22.41■■□□□ 1.18
DDR1-261ENST00000507901 NCAPD2Q15021 1401 aa22.4■■□□□ 1.18
DDR1-261ENST00000507901 KRT27Q7Z3Y8 459 aa22.39■■□□□ 1.17
DDR1-261ENST00000507901 MORC1Q86VD1 984 aa22.39■■□□□ 1.17
DDR1-261ENST00000507901 A0A0G2JS52 829 aa22.38■■□□□ 1.17
DDR1-261ENST00000507901 CSB-PGBD3P0DP91 1061 aa22.38■■□□□ 1.17
DDR1-261ENST00000507901 MYT1Q01538 1121 aa22.38■■□□□ 1.17
DDR1-261ENST00000507901 TNNT2P45379 298 aaPredicted RBP22.36■■□□□ 1.17
DDR1-261ENST00000507901 CC2D1BQ5T0F9 858 aaKnown RBP22.34■■□□□ 1.17
DDR1-261ENST00000507901 LTV1Q96GA3 475 aaPredicted RBP22.34■■□□□ 1.17
DDR1-261ENST00000507901 NLRP2Q9NX02 1062 aa22.34■■□□□ 1.17
DDR1-261ENST00000507901 NBPF6Q5VWK0 638 aa22.33■■□□□ 1.17
DDR1-261ENST00000507901 NBPF4Q96M43 638 aa22.33■■□□□ 1.17
DDR1-261ENST00000507901 CDCA7Q9BWT1 371 aaPredicted RBP22.33■■□□□ 1.17
DDR1-261ENST00000507901 RGPD1P0DJD0 1748 aa22.32■■□□□ 1.16
DDR1-261ENST00000507901 SHANK3Q9BYB0 1731 aa22.32■■□□□ 1.16
DDR1-261ENST00000507901 TNS2Q63HR2 1409 aa22.31■■□□□ 1.16
DDR1-261ENST00000507901 SF3B2Q13435 895 aaKnown RBP22.3■■□□□ 1.16
DDR1-261ENST00000507901 MEGF6O75095 1541 aa22.3■■□□□ 1.16
DDR1-261ENST00000507901 PPM1GO15355 546 aaPredicted RBP22.29■■□□□ 1.16
DDR1-261ENST00000507901 EIF4A2Q14240 407 aaKnown RBP22.29■■□□□ 1.16
DDR1-261ENST00000507901 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
DDR1-261ENST00000507901 IL2RBP14784 551 aa22.28■■□□□ 1.16
DDR1-261ENST00000507901 BCL9O00512 1426 aa22.28■■□□□ 1.16
DDR1-261ENST00000507901 SBF2Q86WG5 1849 aa22.27■■□□□ 1.16
DDR1-261ENST00000507901 OVOS2A0A0G2JMS6 1433 aa22.27■■□□□ 1.16
DDR1-261ENST00000507901 PARD3Q8TEW0 1356 aa22.26■■□□□ 1.15
DDR1-261ENST00000507901 MTHFSP49914 203 aa22.26■■□□□ 1.15
DDR1-261ENST00000507901 DDX10Q13206 875 aaKnown RBP22.26■■□□□ 1.15
DDR1-261ENST00000507901 DDB1Q16531 1140 aa22.26■■□□□ 1.15
DDR1-261ENST00000507901 EYA1Q99502 592 aa22.26■■□□□ 1.15
DDR1-261ENST00000507901 PKD1L3Q7Z443 1732 aa22.26■■□□□ 1.15
DDR1-261ENST00000507901 TNS1Q9HBL0 1735 aaKnown RBP22.26■■□□□ 1.15
DDR1-261ENST00000507901 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
DDR1-261ENST00000507901 USHBP1Q8N6Y0 703 aa22.24■■□□□ 1.15
DDR1-261ENST00000507901 MARCH10Q8NA82 808 aaPredicted RBP22.24■■□□□ 1.15
DDR1-261ENST00000507901 IGSF1Q8N6C5 1336 aa22.24■■□□□ 1.15
DDR1-261ENST00000507901 IL13P35225 146 aa22.23■■□□□ 1.15
DDR1-261ENST00000507901 PDE3BQ13370 1112 aa22.22■■□□□ 1.15
DDR1-261ENST00000507901 PLEKHG2Q9H7P9 1386 aa22.22■■□□□ 1.15
DDR1-261ENST00000507901 EXOC5O00471 708 aa22.21■■□□□ 1.15
DDR1-261ENST00000507901 ZNF316A6NFI3 1004 aaPredicted RBP22.2■■□□□ 1.14
DDR1-261ENST00000507901 FAM196AQ6ZSG2 479 aa22.2■■□□□ 1.14
DDR1-261ENST00000507901 DEFB132Q7Z7B7 95 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms