RNA–Protein interactions for RNA: ENST00000507860.1

MATR3-212, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-212ENST00000507860 USP17L10C9JJH3 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L12C9JPN9 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L21D6R901 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 MAP7D1Q3KQU3 841 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 CRTC2Q53ET0 693 aaPredicted RBP10.35□□□□□ -0.75
MATR3-212ENST00000507860 SH3RF1Q7Z6J0 888 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 RGS22Q8NE09 1264 aa10.35□□□□□ -0.75
MATR3-212ENST00000507860 ATP5J2-PTCD1G3V325 749 aa10.34□□□□□ -0.75
MATR3-212ENST00000507860 PTPN5P54829 565 aa10.34□□□□□ -0.75
MATR3-212ENST00000507860 PTK7Q13308 1070 aa10.34□□□□□ -0.75
MATR3-212ENST00000507860 LARP1Q6PKG0 1096 aaKnown RBP10.34□□□□□ -0.75
MATR3-212ENST00000507860 TRAF7Q6Q0C0 670 aa10.34□□□□□ -0.75
MATR3-212ENST00000507860 DZIP3Q86Y13 1208 aaKnown RBP10.34□□□□□ -0.75
MATR3-212ENST00000507860 IVNS1ABPQ9Y6Y0 642 aa10.34□□□□□ -0.75
MATR3-212ENST00000507860 RASA1P20936 1047 aa10.33□□□□□ -0.76
MATR3-212ENST00000507860 TSGA10IPQ3SY00 556 aa10.33□□□□□ -0.76
MATR3-212ENST00000507860 BAP1Q92560 729 aa10.33□□□□□ -0.76
MATR3-212ENST00000507860 B4GALNT3Q6L9W6 998 aa10.32□□□□□ -0.76
MATR3-212ENST00000507860 CARD14Q9BXL6 1004 aa10.32□□□□□ -0.76
MATR3-212ENST00000507860 MAGEB6P1A0A0J9YX57 407 aa10.31□□□□□ -0.76
MATR3-212ENST00000507860 S1PR4O95977 384 aa10.31□□□□□ -0.76
MATR3-212ENST00000507860 EML3Q32P44 896 aa10.31□□□□□ -0.76
MATR3-212ENST00000507860 NKX2-3Q8TAU0 364 aa10.31□□□□□ -0.76
MATR3-212ENST00000507860 ERFEQ4G0M1 354 aa10.3□□□□□ -0.76
MATR3-212ENST00000507860 BPHLQ86WA6 291 aaPredicted RBP10.3□□□□□ -0.76
MATR3-212ENST00000507860 FAM200AQ8TCP9 573 aa10.3□□□□□ -0.76
MATR3-212ENST00000507860 FOXJ1Q92949 421 aa10.3□□□□□ -0.76
MATR3-212ENST00000507860 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
MATR3-212ENST00000507860 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
MATR3-212ENST00000507860 MTMR7Q9Y216 660 aa10.3□□□□□ -0.76
MATR3-212ENST00000507860 GNEQ9Y223 722 aaKnown RBP10.3□□□□□ -0.76
MATR3-212ENST00000507860 GIGYF1O75420 1035 aaPredicted RBP10.29□□□□□ -0.76
MATR3-212ENST00000507860 FAM69CQ0P6D2 419 aa10.29□□□□□ -0.76
MATR3-212ENST00000507860 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
MATR3-212ENST00000507860 C4orf48Q5BLP8 95 aa10.29□□□□□ -0.76
MATR3-212ENST00000507860 ANKMY2Q8IV38 441 aa10.29□□□□□ -0.76
MATR3-212ENST00000507860 OGFOD1Q8N543 542 aa10.29□□□□□ -0.76
MATR3-212ENST00000507860 ZNF511Q8NB15 262 aa10.29□□□□□ -0.76
MATR3-212ENST00000507860 FCF1Q9Y324 198 aaKnown RBP10.29□□□□□ -0.76
MATR3-212ENST00000507860 CLDN10P78369 228 aa10.28□□□□□ -0.76
MATR3-212ENST00000507860 AGERQ15109 404 aa10.28□□□□□ -0.76
MATR3-212ENST00000507860 PHLDB3Q6NSJ2 640 aa10.28□□□□□ -0.76
MATR3-212ENST00000507860 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
MATR3-212ENST00000507860 TRIM50Q86XT4 487 aa10.27□□□□□ -0.77
MATR3-212ENST00000507860 DOLKQ9UPQ8 538 aa10.27□□□□□ -0.77
MATR3-212ENST00000507860 NOD1Q9Y239 953 aa10.27□□□□□ -0.77
MATR3-212ENST00000507860 SSFA2P28290 1259 aa10.26□□□□□ -0.77
MATR3-212ENST00000507860 DPYDQ12882 1025 aa10.26□□□□□ -0.77
MATR3-212ENST00000507860 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
MATR3-212ENST00000507860 C1QTNF2Q9BXJ5 285 aa10.26□□□□□ -0.77
MATR3-212ENST00000507860 DNAAF2Q9NVR5 837 aaKnown RBP10.26□□□□□ -0.77
MATR3-212ENST00000507860 ZBTB7BO15156 539 aaPredicted RBP10.25□□□□□ -0.77
MATR3-212ENST00000507860 ATP1A2P50993 1020 aa10.25□□□□□ -0.77
MATR3-212ENST00000507860 RNF20Q5VTR2 975 aa10.25□□□□□ -0.77
MATR3-212ENST00000507860 SND1Q7KZF4 910 aaKnown RBP eCLIP10.25□□□□□ -0.77
MATR3-212ENST00000507860 TXNDC2Q86VQ3 553 aa10.25□□□□□ -0.77
MATR3-212ENST00000507860 DKK1O94907 266 aa10.24□□□□□ -0.77
MATR3-212ENST00000507860 OXLD1Q5BKU9 147 aa10.24□□□□□ -0.77
MATR3-212ENST00000507860 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
MATR3-212ENST00000507860 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
MATR3-212ENST00000507860 ZNF594Q96JF6 807 aaPredicted RBP10.24□□□□□ -0.77
MATR3-212ENST00000507860 ESPNB1AK53 854 aa10.23□□□□□ -0.77
MATR3-212ENST00000507860 SH3BP2P78314 561 aa10.23□□□□□ -0.77
MATR3-212ENST00000507860 CCER1Q8TC90 406 aaPredicted RBP10.23□□□□□ -0.77
MATR3-212ENST00000507860 SWI5Q1ZZU3 235 aa10.22□□□□□ -0.77
MATR3-212ENST00000507860 CCDC27Q2M243 656 aa10.22□□□□□ -0.77
MATR3-212ENST00000507860 TRMT44Q8IYL2 757 aaKnown RBP10.22□□□□□ -0.77
MATR3-212ENST00000507860 SIX5Q8N196 739 aa10.22□□□□□ -0.77
MATR3-212ENST00000507860 KIAA1024Q9UPX6 916 aa10.22□□□□□ -0.77
MATR3-212ENST00000507860 PPEF1O14829 653 aaPredicted RBP10.21□□□□□ -0.77
MATR3-212ENST00000507860 ARID4AP29374 1257 aaPredicted RBP10.21□□□□□ -0.77
MATR3-212ENST00000507860 GTF2IP78347 998 aa10.21□□□□□ -0.77
MATR3-212ENST00000507860 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.77
MATR3-212ENST00000507860 FOXD4L5Q5VV16 416 aaPredicted RBP10.21□□□□□ -0.77
MATR3-212ENST00000507860 FOXD4L4Q8WXT5 416 aaPredicted RBP10.21□□□□□ -0.77
MATR3-212ENST00000507860 CDV3Q9UKY7 258 aaKnown RBP10.2□□□□□ -0.78
MATR3-212ENST00000507860 PCDHGA11Q9Y5H2 935 aa10.2□□□□□ -0.78
MATR3-212ENST00000507860 ATP2B4P23634 1241 aa10.19□□□□□ -0.78
MATR3-212ENST00000507860 USP4Q13107 963 aa10.19□□□□□ -0.78
MATR3-212ENST00000507860 CCDC125Q86Z20 511 aa10.19□□□□□ -0.78
MATR3-212ENST00000507860 SEPT12Q8IYM1 358 aa10.19□□□□□ -0.78
MATR3-212ENST00000507860 PCDHB11Q9Y5F2 797 aa10.19□□□□□ -0.78
MATR3-212ENST00000507860 SEC13P55735 322 aa10.18□□□□□ -0.78
MATR3-212ENST00000507860 CCDC102BQ68D86 513 aa10.18□□□□□ -0.78
MATR3-212ENST00000507860 SIRT1Q96EB6 747 aa10.18□□□□□ -0.78
MATR3-212ENST00000507860 ZBTB24O43167 697 aaPredicted RBP10.17□□□□□ -0.78
MATR3-212ENST00000507860 RNF166Q96A37 237 aaPredicted RBP10.17□□□□□ -0.78
MATR3-212ENST00000507860 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
MATR3-212ENST00000507860 TRIM32Q13049 653 aa10.16□□□□□ -0.78
MATR3-212ENST00000507860 TPCN2Q8NHX9 752 aa10.16□□□□□ -0.78
MATR3-212ENST00000507860 RBM19Q9Y4C8 960 aaKnown RBP10.16□□□□□ -0.78
MATR3-212ENST00000507860 SFI1A8K8P3 1242 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms