RNA–Protein interactions for RNA: ENST00000507761.1

LINC01088-204, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-204ENST00000507761 CDV3Q9UKY7 258 aaKnown RBP9.12□□□□□ -0.95
LINC01088-204ENST00000507761 H3BM21 787 aa9.11□□□□□ -0.95
LINC01088-204ENST00000507761 BMP2P12643 396 aa9.11□□□□□ -0.95
LINC01088-204ENST00000507761 VEGFBP49765 207 aa9.11□□□□□ -0.95
LINC01088-204ENST00000507761 LINC00528Q8N1L1 170 aa9.11□□□□□ -0.95
LINC01088-204ENST00000507761 SLC10A4Q96EP9 437 aa9.11□□□□□ -0.95
LINC01088-204ENST00000507761 SOBPA7XYQ1 873 aa9.1□□□□□ -0.95
LINC01088-204ENST00000507761 MAN1A2O60476 641 aa9.1□□□□□ -0.95
LINC01088-204ENST00000507761 PTK2Q05397 1052 aa9.1□□□□□ -0.95
LINC01088-204ENST00000507761 PNMA1Q8ND90 353 aa9.1□□□□□ -0.95
LINC01088-204ENST00000507761 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
LINC01088-204ENST00000507761 STK17AQ9UEE5 414 aa9.1□□□□□ -0.95
LINC01088-204ENST00000507761 GPSM3Q9Y4H4 160 aa9.1□□□□□ -0.95
LINC01088-204ENST00000507761 USP17L8P0C7I0 530 aa9.09□□□□□ -0.95
LINC01088-204ENST00000507761 KCTD15Q96SI1 283 aaPredicted RBP9.09□□□□□ -0.95
LINC01088-204ENST00000507761 TSEN34Q9BSV6 310 aaKnown RBP9.09□□□□□ -0.95
LINC01088-204ENST00000507761 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
LINC01088-204ENST00000507761 GMPRP36959 345 aa9.08□□□□□ -0.96
LINC01088-204ENST00000507761 RFC5P40937 340 aa9.08□□□□□ -0.96
LINC01088-204ENST00000507761 PPP1R26Q5T8A7 1209 aaPredicted RBP9.08□□□□□ -0.96
LINC01088-204ENST00000507761 EPS8L1Q8TE68 723 aa9.07□□□□□ -0.96
LINC01088-204ENST00000507761 PCMTD1Q96MG8 357 aaPredicted RBP9.07□□□□□ -0.96
LINC01088-204ENST00000507761 OCSTAMPQ9BR26 566 aa9.07□□□□□ -0.96
LINC01088-204ENST00000507761 HMX1Q9NP08 348 aaPredicted RBP9.07□□□□□ -0.96
LINC01088-204ENST00000507761 DHX9Q08211 1270 aaKnown RBP9.06□□□□□ -0.96
LINC01088-204ENST00000507761 NEUROD2Q15784 382 aa9.06□□□□□ -0.96
LINC01088-204ENST00000507761 ADAM32Q8TC27 787 aa9.06□□□□□ -0.96
LINC01088-204ENST00000507761 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
LINC01088-204ENST00000507761 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
LINC01088-204ENST00000507761 Q6ZVU0 165 aa9.04□□□□□ -0.96
LINC01088-204ENST00000507761 CBLBQ13191 982 aa9.03□□□□□ -0.96
LINC01088-204ENST00000507761 NBPF20Q3BBV1 942 aa9.03□□□□□ -0.96
LINC01088-204ENST00000507761 TMEM259Q4ZIN3 620 aa9.03□□□□□ -0.96
LINC01088-204ENST00000507761 INTS6LQ5JSJ4 861 aaKnown RBP9.03□□□□□ -0.96
LINC01088-204ENST00000507761 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
LINC01088-204ENST00000507761 VSIG8P0DPA2 414 aa9.02□□□□□ -0.97
LINC01088-204ENST00000507761 IL27Q8NEV9 243 aa9.02□□□□□ -0.97
LINC01088-204ENST00000507761 TTLL8A6PVC2 850 aa9.01□□□□□ -0.97
LINC01088-204ENST00000507761 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.97
LINC01088-204ENST00000507761 SPINT1O43278 529 aa9□□□□□ -0.97
LINC01088-204ENST00000507761 PPFIA3O75145 1194 aa9□□□□□ -0.97
LINC01088-204ENST00000507761 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
LINC01088-204ENST00000507761 TRIM34Q9BYJ4 488 aa9□□□□□ -0.97
LINC01088-204ENST00000507761 FAM181BA6NEQ2 426 aa8.99□□□□□ -0.97
LINC01088-204ENST00000507761 ZSCAN1Q8NBB4 408 aa8.99□□□□□ -0.97
LINC01088-204ENST00000507761 FIGNL2A6NMB9 653 aa8.97□□□□□ -0.97
LINC01088-204ENST00000507761 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
LINC01088-204ENST00000507761 BRPF1P55201 1214 aaPredicted RBP8.97□□□□□ -0.97
LINC01088-204ENST00000507761 RAB15P59190 212 aa8.97□□□□□ -0.97
LINC01088-204ENST00000507761 AGBL1Q96MI9 1066 aa8.97□□□□□ -0.97
LINC01088-204ENST00000507761 TMPRSS4Q9NRS4 437 aa8.97□□□□□ -0.97
LINC01088-204ENST00000507761 ESPNB1AK53 854 aa8.96□□□□□ -0.98
LINC01088-204ENST00000507761 RELBQ01201 579 aa8.96□□□□□ -0.98
LINC01088-204ENST00000507761 ERVH48-1M5A8F1 160 aa8.95□□□□□ -0.98
LINC01088-204ENST00000507761 PTSQ03393 145 aa8.95□□□□□ -0.98
LINC01088-204ENST00000507761 ZNF784Q8NCA9 323 aaPredicted RBP8.95□□□□□ -0.98
LINC01088-204ENST00000507761 ZBBXA8MT70 800 aa8.94□□□□□ -0.98
LINC01088-204ENST00000507761 SEPT12Q8IYM1 358 aa8.94□□□□□ -0.98
LINC01088-204ENST00000507761 GJD4Q96KN9 370 aaPredicted RBP8.94□□□□□ -0.98
LINC01088-204ENST00000507761 CTSOP43234 321 aaPredicted RBP8.93□□□□□ -0.98
LINC01088-204ENST00000507761 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
LINC01088-204ENST00000507761 INSM2Q96T92 566 aaPredicted RBP8.93□□□□□ -0.98
LINC01088-204ENST00000507761 LILRA1O75019 489 aa8.92□□□□□ -0.98
LINC01088-204ENST00000507761 ADH1AP07327 375 aa8.92□□□□□ -0.98
LINC01088-204ENST00000507761 ZNF395Q9H8N7 513 aaPredicted RBP8.92□□□□□ -0.98
LINC01088-204ENST00000507761 POLMQ9NP87 494 aaPredicted RBP8.92□□□□□ -0.98
LINC01088-204ENST00000507761 FBXO45P0C2W1 286 aa8.91□□□□□ -0.98
LINC01088-204ENST00000507761 CCDC155Q8N6L0 562 aa8.91□□□□□ -0.98
LINC01088-204ENST00000507761 BANK1Q8NDB2 785 aa8.91□□□□□ -0.98
LINC01088-204ENST00000507761 PCDHB9Q9Y5E1 797 aa8.91□□□□□ -0.98
LINC01088-204ENST00000507761 ADD1P35611 737 aaKnown RBP8.9□□□□□ -0.98
LINC01088-204ENST00000507761 SLC35F4A4IF30 521 aa8.89□□□□□ -0.99
LINC01088-204ENST00000507761 PTGIRP43119 386 aa8.89□□□□□ -0.99
LINC01088-204ENST00000507761 RNF217Q8TC41 542 aa8.89□□□□□ -0.99
LINC01088-204ENST00000507761 SOCS7O14512 581 aa8.88□□□□□ -0.99
LINC01088-204ENST00000507761 GIGYF1O75420 1035 aaPredicted RBP8.88□□□□□ -0.99
LINC01088-204ENST00000507761 CCDC125Q86Z20 511 aa8.88□□□□□ -0.99
LINC01088-204ENST00000507761 KDF1Q8NAX2 398 aaPredicted RBP8.88□□□□□ -0.99
LINC01088-204ENST00000507761 NANOS1Q8WY41 292 aaKnown RBP8.88□□□□□ -0.99
LINC01088-204ENST00000507761 CYLDQ9NQC7 956 aa8.88□□□□□ -0.99
LINC01088-204ENST00000507761 MCCD1P59942 119 aaPredicted RBP8.87□□□□□ -0.99
LINC01088-204ENST00000507761 GPR161Q8N6U8 529 aaKnown RBP8.87□□□□□ -0.99
LINC01088-204ENST00000507761 ZNF592Q92610 1267 aa8.87□□□□□ -0.99
LINC01088-204ENST00000507761 NR1H3Q13133 447 aa8.86□□□□□ -0.99
LINC01088-204ENST00000507761 FOXD4L5Q5VV16 416 aaPredicted RBP8.86□□□□□ -0.99
LINC01088-204ENST00000507761 ZNF330Q9Y3S2 320 aaPredicted RBP8.86□□□□□ -0.99
LINC01088-204ENST00000507761 APBB1O00213 710 aa8.85□□□□□ -0.99
LINC01088-204ENST00000507761 ITGA6P23229 1130 aa8.85□□□□□ -0.99
LINC01088-204ENST00000507761 TPRNQ4KMQ1 711 aa8.85□□□□□ -0.99
LINC01088-204ENST00000507761 RNF20Q5VTR2 975 aa8.85□□□□□ -0.99
LINC01088-204ENST00000507761 MTMR14Q8NCE2 650 aa8.85□□□□□ -0.99
LINC01088-204ENST00000507761 NDUFB9Q9Y6M9 179 aa8.85□□□□□ -0.99
LINC01088-204ENST00000507761 KRT76Q01546 638 aa8.84□□□□□ -0.99
LINC01088-204ENST00000507761 SENP3-EIF4A1A0A087X0R7 540 aa8.83□□□□□ -1
LINC01088-204ENST00000507761 ATP5J2-PTCD1G3V325 749 aa8.83□□□□□ -1
LINC01088-204ENST00000507761 LYSMD3Q7Z3D4 306 aa8.83□□□□□ -1
LINC01088-204ENST00000507761 CNTNAP3BQ96NU0 1288 aa8.83□□□□□ -1
LINC01088-204ENST00000507761 COL25A1Q9BXS0 654 aaPredicted RBP8.83□□□□□ -1
LINC01088-204ENST00000507761 CNTNAP3Q9BZ76 1288 aa8.83□□□□□ -1
LINC01088-204ENST00000507761 CDC14CA4D256 554 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms