RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SRPK2P78362 688 aaKnown RBP6.62□□□□□ -1.35
LSM6-205ENST00000507449 SEMA3FQ13275 785 aa6.62□□□□□ -1.35
LSM6-205ENST00000507449 C4orf48Q5BLP8 95 aa6.62□□□□□ -1.35
LSM6-205ENST00000507449 SH3RF1Q7Z6J0 888 aa6.62□□□□□ -1.35
LSM6-205ENST00000507449 BAP1Q92560 729 aa6.62□□□□□ -1.35
LSM6-205ENST00000507449 SMCPP49901 116 aaPredicted RBP6.61□□□□□ -1.35
LSM6-205ENST00000507449 PTK2Q05397 1052 aa6.61□□□□□ -1.35
LSM6-205ENST00000507449 LINC01559Q495D7 138 aa6.61□□□□□ -1.35
LSM6-205ENST00000507449 TBC1D9Q6ZT07 1266 aa6.61□□□□□ -1.35
LSM6-205ENST00000507449 ADAM32Q8TC27 787 aa6.61□□□□□ -1.35
LSM6-205ENST00000507449 FOXJ1Q92949 421 aa6.61□□□□□ -1.35
LSM6-205ENST00000507449 CYP4X1Q8N118 509 aa6.6□□□□□ -1.35
LSM6-205ENST00000507449 ZNF511Q8NB15 262 aa6.6□□□□□ -1.35
LSM6-205ENST00000507449 FAM174AQ8TBP5 190 aa6.6□□□□□ -1.35
LSM6-205ENST00000507449 KIFC2Q96AC6 838 aa6.6□□□□□ -1.35
LSM6-205ENST00000507449 ARHGAP9Q9BRR9 750 aa6.6□□□□□ -1.35
LSM6-205ENST00000507449 TFIP11Q9UBB9 837 aaKnown RBP6.6□□□□□ -1.35
LSM6-205ENST00000507449 RFX1P22670 979 aa6.59□□□□□ -1.35
LSM6-205ENST00000507449 SH3BP2P78314 561 aa6.59□□□□□ -1.35
LSM6-205ENST00000507449 FOXC1Q12948 553 aa6.59□□□□□ -1.35
LSM6-205ENST00000507449 LIAT1Q6ZQX7 453 aa6.59□□□□□ -1.35
LSM6-205ENST00000507449 MAFBQ9Y5Q3 323 aaPredicted RBP6.59□□□□□ -1.35
LSM6-205ENST00000507449 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.58□□□□□ -1.36
LSM6-205ENST00000507449 PHTF2Q8N3S3 785 aa6.58□□□□□ -1.36
LSM6-205ENST00000507449 IRF7Q92985 503 aa6.58□□□□□ -1.36
LSM6-205ENST00000507449 EMID1Q96A84 441 aaPredicted RBP6.58□□□□□ -1.36
LSM6-205ENST00000507449 CARD14Q9BXL6 1004 aa6.58□□□□□ -1.36
LSM6-205ENST00000507449 CEP126Q9P2H0 1117 aa6.58□□□□□ -1.36
LSM6-205ENST00000507449 PCDHB9Q9Y5E1 797 aa6.58□□□□□ -1.36
LSM6-205ENST00000507449 MAGEB6P1A0A0J9YX57 407 aa6.57□□□□□ -1.36
LSM6-205ENST00000507449 ATP9BO43861 1147 aa6.57□□□□□ -1.36
LSM6-205ENST00000507449 LMOD1P29536 600 aaPredicted RBP6.57□□□□□ -1.36
LSM6-205ENST00000507449 SKOR1P84550 965 aa6.57□□□□□ -1.36
LSM6-205ENST00000507449 ERFEQ4G0M1 354 aa6.57□□□□□ -1.36
LSM6-205ENST00000507449 PBXIP1Q96AQ6 731 aa6.57□□□□□ -1.36
LSM6-205ENST00000507449 C1QTNF2Q9BXJ5 285 aa6.57□□□□□ -1.36
LSM6-205ENST00000507449 DACH1Q9UI36 760 aa6.57□□□□□ -1.36
LSM6-205ENST00000507449 PPP1R15AO75807 674 aaPredicted RBP6.56□□□□□ -1.36
LSM6-205ENST00000507449 TRIM32Q13049 653 aa6.56□□□□□ -1.36
LSM6-205ENST00000507449 ZBTB33Q86T24 672 aa6.56□□□□□ -1.36
LSM6-205ENST00000507449 BPHLQ86WA6 291 aaPredicted RBP6.56□□□□□ -1.36
LSM6-205ENST00000507449 RETREG2Q8NC44 543 aa6.56□□□□□ -1.36
LSM6-205ENST00000507449 NFATC2IPQ8NCF5 419 aa6.56□□□□□ -1.36
LSM6-205ENST00000507449 TRIM47Q96LD4 638 aa6.55□□□□□ -1.36
LSM6-205ENST00000507449 CHIC2Q9UKJ5 165 aa6.55□□□□□ -1.36
LSM6-205ENST00000507449 USP17L5A8MUK1 530 aa6.54□□□□□ -1.36
LSM6-205ENST00000507449 MCCD1P59942 119 aaPredicted RBP6.54□□□□□ -1.36
LSM6-205ENST00000507449 TSGA10IPQ3SY00 556 aa6.54□□□□□ -1.36
LSM6-205ENST00000507449 KANK4Q5T7N3 995 aaPredicted RBP6.54□□□□□ -1.36
LSM6-205ENST00000507449 NPAS3Q8IXF0 933 aa6.54□□□□□ -1.36
LSM6-205ENST00000507449 USP17L3A6NCW0 530 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 USP17L4A6NCW7 530 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 GIGYF1O75420 1035 aaPredicted RBP6.53□□□□□ -1.36
LSM6-205ENST00000507449 CD2BP2O95400 341 aaKnown RBP6.53□□□□□ -1.36
LSM6-205ENST00000507449 SKIP12755 728 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 RPIAP49247 311 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 AGERQ15109 404 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 CDCA8Q53HL2 280 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 USP17L2Q6R6M4 530 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 USP17L1Q7RTZ2 530 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
LSM6-205ENST00000507449 DEPDC4Q8N2C3 294 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 CCDC85AQ96PX6 553 aaPredicted RBP6.53□□□□□ -1.36
LSM6-205ENST00000507449 ATP13A2Q9NQ11 1180 aa6.53□□□□□ -1.36
LSM6-205ENST00000507449 TTC24A2A3L6 582 aaPredicted RBP6.52□□□□□ -1.37
LSM6-205ENST00000507449 ZBTB24O43167 697 aaPredicted RBP6.52□□□□□ -1.37
LSM6-205ENST00000507449 WNT7BP56706 349 aa6.52□□□□□ -1.37
LSM6-205ENST00000507449 SLFNL1Q499Z3 407 aa6.52□□□□□ -1.37
LSM6-205ENST00000507449 RNF135Q8IUD6 432 aa6.52□□□□□ -1.37
LSM6-205ENST00000507449 PLEKHM2Q8IWE5 1019 aa6.52□□□□□ -1.37
LSM6-205ENST00000507449 TRMT44Q8IYL2 757 aaKnown RBP6.52□□□□□ -1.37
LSM6-205ENST00000507449 KCTD17Q8N5Z5 321 aa6.52□□□□□ -1.37
LSM6-205ENST00000507449 PLPP7Q8NBV4 271 aa6.52□□□□□ -1.37
LSM6-205ENST00000507449 ESPNB1AK53 854 aa6.51□□□□□ -1.37
LSM6-205ENST00000507449 TOR4AQ9NXH8 423 aa6.51□□□□□ -1.37
LSM6-205ENST00000507449 PKD2L1Q9P0L9 805 aa6.51□□□□□ -1.37
LSM6-205ENST00000507449 NXF1Q9UBU9 619 aaKnown RBP6.51□□□□□ -1.37
LSM6-205ENST00000507449 SNRPBP14678 240 aaKnown RBP6.5□□□□□ -1.37
LSM6-205ENST00000507449 GMPRP36959 345 aa6.5□□□□□ -1.37
LSM6-205ENST00000507449 KCNMA1Q12791 1236 aa6.5□□□□□ -1.37
LSM6-205ENST00000507449 NCOA4Q13772 614 aa6.5□□□□□ -1.37
LSM6-205ENST00000507449 TMEM151AQ8N4L1 468 aa6.5□□□□□ -1.37
LSM6-205ENST00000507449 ZNF592Q92610 1267 aa6.5□□□□□ -1.37
LSM6-205ENST00000507449 SLC10A4Q96EP9 437 aa6.5□□□□□ -1.37
LSM6-205ENST00000507449 TRAIPQ9BWF2 469 aa6.5□□□□□ -1.37
LSM6-205ENST00000507449 CARNS1A5YM72 827 aa6.49□□□□□ -1.37
LSM6-205ENST00000507449 RNF225M0QZC1 329 aaPredicted RBP6.49□□□□□ -1.37
LSM6-205ENST00000507449 ATG7O95352 703 aa6.49□□□□□ -1.37
LSM6-205ENST00000507449 PDIA4P13667 645 aaKnown RBP6.49□□□□□ -1.37
LSM6-205ENST00000507449 RC3H1Q5TC82 1133 aaKnown RBP6.49□□□□□ -1.37
LSM6-205ENST00000507449 CDCA7Q9BWT1 371 aaPredicted RBP6.49□□□□□ -1.37
LSM6-205ENST00000507449 VARSP26640 1264 aaKnown RBP6.48□□□□□ -1.37
LSM6-205ENST00000507449 CRTC2Q53ET0 693 aaPredicted RBP6.48□□□□□ -1.37
LSM6-205ENST00000507449 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
LSM6-205ENST00000507449 VRTNQ9H8Y1 702 aa6.48□□□□□ -1.37
LSM6-205ENST00000507449 MKRN1Q9UHC7 482 aaKnown RBP6.48□□□□□ -1.37
LSM6-205ENST00000507449 ZMIZ1Q9ULJ6 1067 aa6.48□□□□□ -1.37
LSM6-205ENST00000507449 TMEM88BA6NKF7 163 aa6.47□□□□□ -1.37
LSM6-205ENST00000507449 SIAH2O43255 324 aa6.47□□□□□ -1.37
LSM6-205ENST00000507449 TRIM26Q12899 539 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 204.1 ms