RNA–Protein interactions for RNA: ENST00000507313.5

LINC00939-202, long intergenic non-protein coding RNA 939, humanhuman

TSL 2 BASIC

Gene LINC00939, Length 2,819 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-202ENST00000507313 RRS1Q15050 365 aaKnown RBP11.86□□□□□ -0.51
LINC00939-202ENST00000507313 POTEAQ6S8J7 498 aa11.86□□□□□ -0.51
LINC00939-202ENST00000507313 KCNH5Q8NCM2 988 aa11.86□□□□□ -0.51
LINC00939-202ENST00000507313 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
LINC00939-202ENST00000507313 EVA1CP58658 441 aa11.86□□□□□ -0.51
LINC00939-202ENST00000507313 ERICH6BQ5W0A0 696 aa11.86□□□□□ -0.51
LINC00939-202ENST00000507313 USP35Q9P2H5 1018 aa11.86□□□□□ -0.51
LINC00939-202ENST00000507313 BRD4O60885 1362 aaPredicted RBP11.86□□□□□ -0.51
LINC00939-202ENST00000507313 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
LINC00939-202ENST00000507313 FNBP4Q8N3X1 1017 aaPredicted RBP11.85□□□□□ -0.51
LINC00939-202ENST00000507313 PRKRIP1Q9H875 184 aaPredicted RBP11.85□□□□□ -0.51
LINC00939-202ENST00000507313 AXIN2Q9Y2T1 843 aa11.85□□□□□ -0.51
LINC00939-202ENST00000507313 USP19O94966 1318 aa11.84□□□□□ -0.51
LINC00939-202ENST00000507313 ZNF772Q68DY9 489 aaPredicted RBP11.84□□□□□ -0.51
LINC00939-202ENST00000507313 MORC1Q86VD1 984 aa11.84□□□□□ -0.51
LINC00939-202ENST00000507313 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
LINC00939-202ENST00000507313 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
LINC00939-202ENST00000507313 UNC5CLQ8IV45 518 aa11.83□□□□□ -0.52
LINC00939-202ENST00000507313 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
LINC00939-202ENST00000507313 AMPHP49418 695 aa11.82□□□□□ -0.52
LINC00939-202ENST00000507313 CSB-PGBD3P0DP91 1061 aa11.82□□□□□ -0.52
LINC00939-202ENST00000507313 TOPAZ1Q8N9V7 1692 aa11.81□□□□□ -0.52
LINC00939-202ENST00000507313 ZBED9Q6R2W3 1325 aa11.81□□□□□ -0.52
LINC00939-202ENST00000507313 NBR1Q14596 966 aa11.81□□□□□ -0.52
LINC00939-202ENST00000507313 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
LINC00939-202ENST00000507313 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
LINC00939-202ENST00000507313 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
LINC00939-202ENST00000507313 ITSN1Q15811 1721 aa11.81□□□□□ -0.52
LINC00939-202ENST00000507313 MAP3K19Q56UN5 1328 aa11.8□□□□□ -0.52
LINC00939-202ENST00000507313 RXRBP28702 533 aa11.8□□□□□ -0.52
LINC00939-202ENST00000507313 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
LINC00939-202ENST00000507313 A0A0G2JS52 829 aa11.8□□□□□ -0.52
LINC00939-202ENST00000507313 PDE4CQ08493 712 aa11.8□□□□□ -0.52
LINC00939-202ENST00000507313 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
LINC00939-202ENST00000507313 SENP3-EIF4A1A0A087X0R7 540 aa11.79□□□□□ -0.52
LINC00939-202ENST00000507313 HSP90AB2PQ58FF8 381 aa11.79□□□□□ -0.52
LINC00939-202ENST00000507313 ILDR2Q71H61 639 aa11.79□□□□□ -0.52
LINC00939-202ENST00000507313 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
LINC00939-202ENST00000507313 TOM1L2Q6ZVM7 507 aa11.78□□□□□ -0.52
LINC00939-202ENST00000507313 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
LINC00939-202ENST00000507313 POLKQ9UBT6 870 aa11.78□□□□□ -0.52
LINC00939-202ENST00000507313 TRPM3Q9HCF6 1732 aaPredicted RBP11.78□□□□□ -0.52
LINC00939-202ENST00000507313 BCL9LQ86UU0 1499 aa11.78□□□□□ -0.52
LINC00939-202ENST00000507313 NLRP2Q9NX02 1062 aa11.78□□□□□ -0.52
LINC00939-202ENST00000507313 FAM98CQ17RN3 349 aaKnown RBP11.77□□□□□ -0.53
LINC00939-202ENST00000507313 IP6K1Q92551 441 aa11.77□□□□□ -0.53
LINC00939-202ENST00000507313 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.53
LINC00939-202ENST00000507313 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.53
LINC00939-202ENST00000507313 HOXC9P31274 260 aa11.77□□□□□ -0.53
LINC00939-202ENST00000507313 RBM6P78332 1123 aaKnown RBP11.77□□□□□ -0.53
LINC00939-202ENST00000507313 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
LINC00939-202ENST00000507313 CPDO75976 1380 aa11.76□□□□□ -0.53
LINC00939-202ENST00000507313 SHPRHQ149N8 1683 aa11.76□□□□□ -0.53
LINC00939-202ENST00000507313 ANKRD24Q8TF21 1146 aa11.76□□□□□ -0.53
LINC00939-202ENST00000507313 VPS72Q15906 364 aa11.76□□□□□ -0.53
LINC00939-202ENST00000507313 AATKQ6ZMQ8 1374 aa11.76□□□□□ -0.53
LINC00939-202ENST00000507313 ALS2Q96Q42 1657 aa11.75□□□□□ -0.53
LINC00939-202ENST00000507313 MTHFSP49914 203 aa11.75□□□□□ -0.53
LINC00939-202ENST00000507313 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
LINC00939-202ENST00000507313 SLIT2O94813 1529 aa11.74□□□□□ -0.53
LINC00939-202ENST00000507313 DHX37Q8IY37 1157 aaKnown RBP11.74□□□□□ -0.53
LINC00939-202ENST00000507313 USHBP1Q8N6Y0 703 aa11.73□□□□□ -0.53
LINC00939-202ENST00000507313 CAMTA1Q9Y6Y1 1673 aa11.73□□□□□ -0.53
LINC00939-202ENST00000507313 COL22A1Q8NFW1 1626 aaPredicted RBP11.72□□□□□ -0.53
LINC00939-202ENST00000507313 ERBB3P21860 1342 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 SPATA31A5Q5VU36 1347 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 SPATA31A7Q8IWB4 1347 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 FAM182BQ5T319 152 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 SEPT12Q8IYM1 358 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 CCDC136Q96JN2 1154 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 SPATA31A1Q5TZJ5 1347 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 WDR17Q8IZU2 1322 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 NBPF6Q5VWK0 638 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 NBPF4Q96M43 638 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 AKAP12Q02952 1782 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 MYOM1P52179 1685 aa11.72□□□□□ -0.53
LINC00939-202ENST00000507313 MON2Q7Z3U7 1717 aa11.71□□□□□ -0.54
LINC00939-202ENST00000507313 NSD2O96028 1365 aa11.71□□□□□ -0.54
LINC00939-202ENST00000507313 SLIT3O75094 1523 aa11.71□□□□□ -0.54
LINC00939-202ENST00000507313 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
LINC00939-202ENST00000507313 PPP2R1AP30153 589 aa11.69□□□□□ -0.54
LINC00939-202ENST00000507313 CARD10Q9BWT7 1032 aa11.69□□□□□ -0.54
LINC00939-202ENST00000507313 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
LINC00939-202ENST00000507313 NRKQ7Z2Y5 1582 aa11.69□□□□□ -0.54
LINC00939-202ENST00000507313 ANP32AP39687 249 aaKnown RBP11.69□□□□□ -0.54
LINC00939-202ENST00000507313 EIF4A2Q14240 407 aaKnown RBP11.69□□□□□ -0.54
LINC00939-202ENST00000507313 ATRNO75882 1429 aa11.69□□□□□ -0.54
LINC00939-202ENST00000507313 EYA1Q99502 592 aa11.68□□□□□ -0.54
LINC00939-202ENST00000507313 FLT4P35916 1363 aa11.68□□□□□ -0.54
LINC00939-202ENST00000507313 NFAT5O94916 1531 aa11.68□□□□□ -0.54
LINC00939-202ENST00000507313 COL5A2P05997 1499 aaPredicted RBP11.68□□□□□ -0.54
LINC00939-202ENST00000507313 PKNOX2Q96KN3 472 aa11.68□□□□□ -0.54
LINC00939-202ENST00000507313 ONECUT3O60422 494 aaPredicted RBP11.67□□□□□ -0.54
LINC00939-202ENST00000507313 PDE3BQ13370 1112 aa11.67□□□□□ -0.54
LINC00939-202ENST00000507313 IPO9Q96P70 1041 aaKnown RBP11.67□□□□□ -0.54
LINC00939-202ENST00000507313 INSRP06213 1382 aa11.67□□□□□ -0.54
LINC00939-202ENST00000507313 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
LINC00939-202ENST00000507313 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
LINC00939-202ENST00000507313 EP400Q96L91 3159 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms