RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 MYT1Q01538 1121 aa26.67■■□□□ 1.86
LMNA-221ENST00000506981 C11orf95C9JLR9 678 aaPredicted RBP26.66■■□□□ 1.86
LMNA-221ENST00000506981 GGNBP2Q9H3C7 697 aa26.66■■□□□ 1.86
LMNA-221ENST00000506981 FYB1O15117 783 aa26.65■■□□□ 1.86
LMNA-221ENST00000506981 CARD14Q9BXL6 1004 aa26.65■■□□□ 1.86
LMNA-221ENST00000506981 CGNL1Q0VF96 1302 aa26.65■■□□□ 1.86
LMNA-221ENST00000506981 KIF7Q2M1P5 1343 aa26.65■■□□□ 1.86
LMNA-221ENST00000506981 SPATA31A1Q5TZJ5 1347 aa26.64■■□□□ 1.85
LMNA-221ENST00000506981 WNK3Q9BYP7 1800 aa26.63■■□□□ 1.85
LMNA-221ENST00000506981 LARP1Q6PKG0 1096 aaKnown RBP26.63■■□□□ 1.85
LMNA-221ENST00000506981 THSD7AQ9UPZ6 1657 aa26.63■■□□□ 1.85
LMNA-221ENST00000506981 FAM98CQ17RN3 349 aaKnown RBP26.62■■□□□ 1.85
LMNA-221ENST00000506981 CRB1P82279 1406 aa26.62■■□□□ 1.85
LMNA-221ENST00000506981 SEPT12Q8IYM1 358 aa26.61■■□□□ 1.85
LMNA-221ENST00000506981 PANK3Q9H999 370 aa26.61■■□□□ 1.85
LMNA-221ENST00000506981 USP35Q9P2H5 1018 aa26.61■■□□□ 1.85
LMNA-221ENST00000506981 FAM208AQ9UK61 1670 aaKnown RBP26.6■■□□□ 1.85
LMNA-221ENST00000506981 CSB-PGBD3P0DP91 1061 aa26.59■■□□□ 1.85
LMNA-221ENST00000506981 AXIN2Q9Y2T1 843 aa26.59■■□□□ 1.85
LMNA-221ENST00000506981 MAP2P11137 1827 aaKnown RBP26.59■■□□□ 1.85
LMNA-221ENST00000506981 ONECUT3O60422 494 aaPredicted RBP26.58■■□□□ 1.85
LMNA-221ENST00000506981 TOM1L2Q6ZVM7 507 aa26.58■■□□□ 1.85
LMNA-221ENST00000506981 WDR17Q8IZU2 1322 aa26.58■■□□□ 1.85
LMNA-221ENST00000506981 TCP11L2Q8N4U5 519 aa26.57■■□□□ 1.84
LMNA-221ENST00000506981 CCDC7Q96M83 1385 aa26.57■■□□□ 1.84
LMNA-221ENST00000506981 BLMP54132 1417 aaPredicted RBP26.56■■□□□ 1.84
LMNA-221ENST00000506981 THRAP3Q9Y2W1 955 aaKnown RBP26.56■■□□□ 1.84
LMNA-221ENST00000506981 AMPHP49418 695 aa26.55■■□□□ 1.84
LMNA-221ENST00000506981 PARP4Q9UKK3 1724 aaKnown RBP26.55■■□□□ 1.84
LMNA-221ENST00000506981 BARGINQ6ZT62 677 aa26.54■■□□□ 1.84
LMNA-221ENST00000506981 MAP3K19Q56UN5 1328 aa26.53■■□□□ 1.84
LMNA-221ENST00000506981 RTL1A6NKG5 1358 aa26.53■■□□□ 1.84
LMNA-221ENST00000506981 NSD2O96028 1365 aa26.52■■□□□ 1.84
LMNA-221ENST00000506981 KRT27Q7Z3Y8 459 aa26.52■■□□□ 1.84
LMNA-221ENST00000506981 IP6K1Q92551 441 aa26.52■■□□□ 1.84
LMNA-221ENST00000506981 KNSTRNQ9Y448 316 aa26.52■■□□□ 1.84
LMNA-221ENST00000506981 ERBB3P21860 1342 aa26.51■■□□□ 1.83
LMNA-221ENST00000506981 RRS1Q15050 365 aaKnown RBP26.5■■□□□ 1.83
LMNA-221ENST00000506981 ANKRD24Q8TF21 1146 aa26.5■■□□□ 1.83
LMNA-221ENST00000506981 RGPD2P0DJD1 1756 aa26.5■■□□□ 1.83
LMNA-221ENST00000506981 WASHC2AQ641Q2 1341 aa26.49■■□□□ 1.83
LMNA-221ENST00000506981 FBLN1P23142 703 aa26.49■■□□□ 1.83
LMNA-221ENST00000506981 PEAK1Q9H792 1746 aa26.48■■□□□ 1.83
LMNA-221ENST00000506981 LRRC37A3O60309 1634 aa26.48■■□□□ 1.83
LMNA-221ENST00000506981 HOXC9P31274 260 aa26.48■■□□□ 1.83
LMNA-221ENST00000506981 ZEB1P37275 1124 aaPredicted RBP26.48■■□□□ 1.83
LMNA-221ENST00000506981 UPF1Q92900 1129 aaKnown RBP eCLIP26.48■■□□□ 1.83
LMNA-221ENST00000506981 CARD10Q9BWT7 1032 aa26.48■■□□□ 1.83
LMNA-221ENST00000506981 NLRP2Q9NX02 1062 aa26.47■■□□□ 1.83
LMNA-221ENST00000506981 SMG6Q86US8 1419 aaKnown RBP26.47■■□□□ 1.83
LMNA-221ENST00000506981 KIF24Q5T7B8 1368 aa26.46■■□□□ 1.83
LMNA-221ENST00000506981 FLT4P35916 1363 aa26.46■■□□□ 1.83
LMNA-221ENST00000506981 LTV1Q96GA3 475 aaPredicted RBP26.45■■□□□ 1.82
LMNA-221ENST00000506981 CDCA7Q9BWT1 371 aaPredicted RBP26.44■■□□□ 1.82
LMNA-221ENST00000506981 PDE3BQ13370 1112 aa26.43■■□□□ 1.82
LMNA-221ENST00000506981 RGPD1P0DJD0 1748 aa26.42■■□□□ 1.82
LMNA-221ENST00000506981 TNNT2P45379 298 aaPredicted RBP26.41■■□□□ 1.82
LMNA-221ENST00000506981 MORC1Q86VD1 984 aa26.41■■□□□ 1.82
LMNA-221ENST00000506981 PPM1GO15355 546 aaPredicted RBP26.4■■□□□ 1.82
LMNA-221ENST00000506981 EMILIN1Q9Y6C2 1016 aa26.4■■□□□ 1.82
LMNA-221ENST00000506981 INSRP06213 1382 aa26.4■■□□□ 1.82
LMNA-221ENST00000506981 DDB1Q16531 1140 aa26.38■■□□□ 1.81
LMNA-221ENST00000506981 CCDC125Q86Z20 511 aa26.38■■□□□ 1.81
LMNA-221ENST00000506981 DISP2A7MBM2 1401 aa26.38■■□□□ 1.81
LMNA-221ENST00000506981 AMER1Q5JTC6 1135 aaPredicted RBP26.36■■□□□ 1.81
LMNA-221ENST00000506981 SF3B2Q13435 895 aaKnown RBP26.35■■□□□ 1.81
LMNA-221ENST00000506981 HSP90AB2PQ58FF8 381 aa26.35■■□□□ 1.81
LMNA-221ENST00000506981 FAM182BQ5T319 152 aa26.35■■□□□ 1.81
LMNA-221ENST00000506981 EP400Q96L91 3159 aa26.34■■□□□ 1.81
LMNA-221ENST00000506981 IL2RBP14784 551 aa26.34■■□□□ 1.81
LMNA-221ENST00000506981 POLKQ9UBT6 870 aa26.34■■□□□ 1.81
LMNA-221ENST00000506981 TNS2Q63HR2 1409 aa26.33■■□□□ 1.81
LMNA-221ENST00000506981 SBF2Q86WG5 1849 aa26.33■■□□□ 1.81
LMNA-221ENST00000506981 PER1O15534 1290 aaPredicted RBP26.33■■□□□ 1.81
LMNA-221ENST00000506981 FAM196AQ6ZSG2 479 aa26.33■■□□□ 1.81
LMNA-221ENST00000506981 TNS1Q9HBL0 1735 aaKnown RBP26.32■■□□□ 1.8
LMNA-221ENST00000506981 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
LMNA-221ENST00000506981 OVOS2A0A0G2JMS6 1433 aa26.31■■□□□ 1.8
LMNA-221ENST00000506981 EXOC5O00471 708 aa26.31■■□□□ 1.8
LMNA-221ENST00000506981 CC2D1BQ5T0F9 858 aaKnown RBP26.31■■□□□ 1.8
LMNA-221ENST00000506981 NPC1L1Q9UHC9 1359 aa26.3■■□□□ 1.8
LMNA-221ENST00000506981 NBPF6Q5VWK0 638 aa26.27■■□□□ 1.8
LMNA-221ENST00000506981 NBPF4Q96M43 638 aa26.27■■□□□ 1.8
LMNA-221ENST00000506981 CNGB1Q14028 1251 aaPredicted RBP26.26■■□□□ 1.79
LMNA-221ENST00000506981 SHANK3Q9BYB0 1731 aa26.25■■□□□ 1.79
LMNA-221ENST00000506981 USHBP1Q8N6Y0 703 aa26.24■■□□□ 1.79
LMNA-221ENST00000506981 RAPGEF4Q8WZA2 1011 aa26.24■■□□□ 1.79
LMNA-221ENST00000506981 MEGF6O75095 1541 aa26.23■■□□□ 1.79
LMNA-221ENST00000506981 TRIM37O94972 964 aa26.22■■□□□ 1.79
LMNA-221ENST00000506981 BAG6P46379 1132 aa26.22■■□□□ 1.79
LMNA-221ENST00000506981 MARCH10Q8NA82 808 aaPredicted RBP26.22■■□□□ 1.79
LMNA-221ENST00000506981 TATP17735 454 aaPredicted RBP26.2■■□□□ 1.78
LMNA-221ENST00000506981 EIF4A2Q14240 407 aaKnown RBP26.2■■□□□ 1.78
LMNA-221ENST00000506981 PKD1L3Q7Z443 1732 aa26.19■■□□□ 1.78
LMNA-221ENST00000506981 NHSQ6T4R5 1651 aa26.19■■□□□ 1.78
LMNA-221ENST00000506981 BCL9O00512 1426 aa26.18■■□□□ 1.78
LMNA-221ENST00000506981 NCAPD2Q15021 1401 aa26.18■■□□□ 1.78
LMNA-221ENST00000506981 EYA1Q99502 592 aa26.17■■□□□ 1.78
LMNA-221ENST00000506981 MTHFSP49914 203 aa26.16■■□□□ 1.78
LMNA-221ENST00000506981 DEFB132Q7Z7B7 95 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms