RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 USP17L3A6NCW0 530 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 USP17L4A6NCW7 530 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 USP17L5A8MUK1 530 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 SKIP12755 728 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 ERFEQ4G0M1 354 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 USP17L2Q6R6M4 530 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 USP17L1Q7RTZ2 530 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 ANKLE1Q8NAG6 615 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 CUX2O14529 1486 aa8.31□□□□□ -1.08
HERC6-207ENST00000506842 PPEF1O14829 653 aaPredicted RBP8.3□□□□□ -1.08
HERC6-207ENST00000506842 SH3BP2P78314 561 aa8.3□□□□□ -1.08
HERC6-207ENST00000506842 SLFNL1Q499Z3 407 aa8.3□□□□□ -1.08
HERC6-207ENST00000506842 RNF135Q8IUD6 432 aa8.3□□□□□ -1.08
HERC6-207ENST00000506842 CARD14Q9BXL6 1004 aa8.3□□□□□ -1.08
HERC6-207ENST00000506842 VRTNQ9H8Y1 702 aa8.3□□□□□ -1.08
HERC6-207ENST00000506842 NESP48681 1621 aa8.29□□□□□ -1.08
HERC6-207ENST00000506842 MAGEB6P1A0A0J9YX57 407 aa8.29□□□□□ -1.08
HERC6-207ENST00000506842 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
HERC6-207ENST00000506842 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
HERC6-207ENST00000506842 DZIP3Q86Y13 1208 aaKnown RBP8.29□□□□□ -1.08
HERC6-207ENST00000506842 TRMT44Q8IYL2 757 aaKnown RBP8.29□□□□□ -1.08
HERC6-207ENST00000506842 ERCC6Q03468 1493 aa8.28□□□□□ -1.08
HERC6-207ENST00000506842 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
HERC6-207ENST00000506842 CSB-PGBD3P0DP91 1061 aa8.28□□□□□ -1.08
HERC6-207ENST00000506842 GGCXP38435 758 aa8.28□□□□□ -1.08
HERC6-207ENST00000506842 ELOAQ14241 798 aaKnown RBP8.28□□□□□ -1.08
HERC6-207ENST00000506842 MAP7D1Q3KQU3 841 aa8.28□□□□□ -1.08
HERC6-207ENST00000506842 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
HERC6-207ENST00000506842 KCTD17Q8N5Z5 321 aa8.28□□□□□ -1.08
HERC6-207ENST00000506842 PLPP7Q8NBV4 271 aa8.28□□□□□ -1.08
HERC6-207ENST00000506842 RSF1Q96T23 1441 aaPredicted RBP8.28□□□□□ -1.08
HERC6-207ENST00000506842 LAMC3Q9Y6N6 1575 aa8.27□□□□□ -1.09
HERC6-207ENST00000506842 TRIM32Q13049 653 aa8.27□□□□□ -1.09
HERC6-207ENST00000506842 TRAF7Q6Q0C0 670 aa8.27□□□□□ -1.09
HERC6-207ENST00000506842 TMEM88BA6NKF7 163 aa8.26□□□□□ -1.09
HERC6-207ENST00000506842 ESPNB1AK53 854 aa8.26□□□□□ -1.09
HERC6-207ENST00000506842 RPIAP49247 311 aa8.26□□□□□ -1.09
HERC6-207ENST00000506842 WNT7BP56706 349 aa8.26□□□□□ -1.09
HERC6-207ENST00000506842 AGERQ15109 404 aa8.26□□□□□ -1.09
HERC6-207ENST00000506842 DEPDC4Q8N2C3 294 aa8.26□□□□□ -1.09
HERC6-207ENST00000506842 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
HERC6-207ENST00000506842 WIZO95785 1651 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 ZBTB7CA1YPR0 619 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 ZBTB24O43167 697 aaPredicted RBP8.25□□□□□ -1.09
HERC6-207ENST00000506842 GIGYF1O75420 1035 aaPredicted RBP8.25□□□□□ -1.09
HERC6-207ENST00000506842 SKOR1P84550 965 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 NCOA4Q13772 614 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 TSGA10IPQ3SY00 556 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 PPP1R18Q6NYC8 613 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 SLC10A4Q96EP9 437 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 CCDC85AQ96PX6 553 aaPredicted RBP8.25□□□□□ -1.09
HERC6-207ENST00000506842 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.25□□□□□ -1.09
HERC6-207ENST00000506842 MKRN1Q9UHC7 482 aaKnown RBP8.25□□□□□ -1.09
HERC6-207ENST00000506842 CDV3Q9UKY7 258 aaKnown RBP8.25□□□□□ -1.09
HERC6-207ENST00000506842 PDS5BQ9NTI5 1447 aa8.25□□□□□ -1.09
HERC6-207ENST00000506842 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
HERC6-207ENST00000506842 RNF20Q5VTR2 975 aa8.24□□□□□ -1.09
HERC6-207ENST00000506842 ZMIZ1Q9ULJ6 1067 aa8.24□□□□□ -1.09
HERC6-207ENST00000506842 NBPF20Q3BBV1 942 aa8.23□□□□□ -1.09
HERC6-207ENST00000506842 CRTC2Q53ET0 693 aaPredicted RBP8.23□□□□□ -1.09
HERC6-207ENST00000506842 CCDC125Q86Z20 511 aa8.23□□□□□ -1.09
HERC6-207ENST00000506842 SEPT12Q8IYM1 358 aa8.23□□□□□ -1.09
HERC6-207ENST00000506842 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L10C9JJH3 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L11C9JVI0 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L21D6R901 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L18D6R9N7 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L22D6RA61 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L17D6RBQ6 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L19D6RCP7 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L20D6RJB6 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 BRD1O95696 1058 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 VARSP26640 1264 aaKnown RBP8.22□□□□□ -1.09
HERC6-207ENST00000506842 USP17L24Q0WX57 530 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 PTK7Q13308 1070 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 EML3Q32P44 896 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 IFFO2Q5TF58 517 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 MAP4K5Q9Y4K4 846 aa8.22□□□□□ -1.09
HERC6-207ENST00000506842 CARNS1A5YM72 827 aa8.21□□□□□ -1.1
HERC6-207ENST00000506842 STK32AQ8WU08 396 aa8.21□□□□□ -1.1
HERC6-207ENST00000506842 NOVA2Q9UNW9 492 aaKnown RBP8.21□□□□□ -1.1
HERC6-207ENST00000506842 RASA1P20936 1047 aa8.2□□□□□ -1.1
HERC6-207ENST00000506842 TMEM164Q5U3C3 297 aa8.2□□□□□ -1.1
HERC6-207ENST00000506842 TRIM50Q86XT4 487 aa8.2□□□□□ -1.1
HERC6-207ENST00000506842 AEBP1Q8IUX7 1158 aa8.2□□□□□ -1.1
HERC6-207ENST00000506842 EMID1Q96A84 441 aaPredicted RBP8.2□□□□□ -1.1
HERC6-207ENST00000506842 NOD1Q9Y239 953 aa8.2□□□□□ -1.1
HERC6-207ENST00000506842 CLDN10P78369 228 aa8.19□□□□□ -1.1
HERC6-207ENST00000506842 MMRN1Q13201 1228 aa8.19□□□□□ -1.1
HERC6-207ENST00000506842 LARP1Q6PKG0 1096 aaKnown RBP8.19□□□□□ -1.1
HERC6-207ENST00000506842 LIAT1Q6ZQX7 453 aa8.19□□□□□ -1.1
HERC6-207ENST00000506842 CDK15Q96Q40 435 aa8.19□□□□□ -1.1
HERC6-207ENST00000506842 KCTD15Q96SI1 283 aaPredicted RBP8.19□□□□□ -1.1
HERC6-207ENST00000506842 CDCA7Q9BWT1 371 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms