RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 C4orf48Q5BLP8 95 aa13.82□□□□□ -0.2
RETREG1-203ENST00000506441 VASH1Q7L8A9 365 aaPredicted RBP13.82□□□□□ -0.2
RETREG1-203ENST00000506441 ZNF598Q86UK7 904 aaKnown RBP13.82□□□□□ -0.2
RETREG1-203ENST00000506441 MAP4K5Q9Y4K4 846 aa13.82□□□□□ -0.2
RETREG1-203ENST00000506441 WNT7AO00755 349 aa13.81□□□□□ -0.2
RETREG1-203ENST00000506441 LMOD1P29536 600 aaPredicted RBP13.81□□□□□ -0.2
RETREG1-203ENST00000506441 PRKD2Q9BZL6 878 aa13.81□□□□□ -0.2
RETREG1-203ENST00000506441 ARID5BQ14865 1188 aa13.8□□□□□ -0.2
RETREG1-203ENST00000506441 MPNDQ8N594 471 aa13.8□□□□□ -0.2
RETREG1-203ENST00000506441 RFX1P22670 979 aa13.79□□□□□ -0.2
RETREG1-203ENST00000506441 ZNF697Q5TEC3 545 aa13.79□□□□□ -0.2
RETREG1-203ENST00000506441 SIRT1Q96EB6 747 aa13.79□□□□□ -0.2
RETREG1-203ENST00000506441 KCTD15Q96SI1 283 aaPredicted RBP13.79□□□□□ -0.2
RETREG1-203ENST00000506441 ESF1Q9H501 851 aaKnown RBP13.79□□□□□ -0.2
RETREG1-203ENST00000506441 PDE4CQ08493 712 aa13.77□□□□□ -0.21
RETREG1-203ENST00000506441 TBC1D9Q6ZT07 1266 aa13.77□□□□□ -0.21
RETREG1-203ENST00000506441 PBXIP1Q96AQ6 731 aa13.77□□□□□ -0.21
RETREG1-203ENST00000506441 CDK15Q96Q40 435 aa13.77□□□□□ -0.21
RETREG1-203ENST00000506441 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
RETREG1-203ENST00000506441 DHX9Q08211 1270 aaKnown RBP13.76□□□□□ -0.21
RETREG1-203ENST00000506441 PLPP7Q8NBV4 271 aa13.76□□□□□ -0.21
RETREG1-203ENST00000506441 UCN2Q96RP3 112 aa13.76□□□□□ -0.21
RETREG1-203ENST00000506441 RGS20O76081 388 aa13.75□□□□□ -0.21
RETREG1-203ENST00000506441 EML3Q32P44 896 aa13.75□□□□□ -0.21
RETREG1-203ENST00000506441 PHTF2Q8N3S3 785 aa13.75□□□□□ -0.21
RETREG1-203ENST00000506441 VRTNQ9H8Y1 702 aa13.75□□□□□ -0.21
RETREG1-203ENST00000506441 DOLKQ9UPQ8 538 aa13.75□□□□□ -0.21
RETREG1-203ENST00000506441 MAFBQ9Y5Q3 323 aaPredicted RBP13.75□□□□□ -0.21
RETREG1-203ENST00000506441 CFAP70Q5T0N1 1121 aa13.74□□□□□ -0.21
RETREG1-203ENST00000506441 PLEKHM2Q8IWE5 1019 aa13.74□□□□□ -0.21
RETREG1-203ENST00000506441 USP17L5A8MUK1 530 aa13.73□□□□□ -0.21
RETREG1-203ENST00000506441 ESPNB1AK53 854 aa13.73□□□□□ -0.21
RETREG1-203ENST00000506441 FOXC1Q12948 553 aa13.73□□□□□ -0.21
RETREG1-203ENST00000506441 MRGPRX2Q96LB1 330 aa13.73□□□□□ -0.21
RETREG1-203ENST00000506441 USP4Q13107 963 aa13.72□□□□□ -0.21
RETREG1-203ENST00000506441 NR5A1Q13285 461 aa13.72□□□□□ -0.21
RETREG1-203ENST00000506441 EMID1Q96A84 441 aaPredicted RBP13.72□□□□□ -0.21
RETREG1-203ENST00000506441 PIK3CDO00329 1044 aa13.71□□□□□ -0.21
RETREG1-203ENST00000506441 TRIM50Q86XT4 487 aa13.71□□□□□ -0.21
RETREG1-203ENST00000506441 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 SIAH2O43255 324 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 USP17L2Q6R6M4 530 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 SNIP1Q8TAD8 396 aaKnown RBP13.7□□□□□ -0.22
RETREG1-203ENST00000506441 CHIC2Q9UKJ5 165 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 NOD1Q9Y239 953 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 WASF2Q9Y6W5 498 aa13.7□□□□□ -0.22
RETREG1-203ENST00000506441 ADH1CP00326 375 aa13.69□□□□□ -0.22
RETREG1-203ENST00000506441 MYCP01106 439 aaPredicted RBP13.69□□□□□ -0.22
RETREG1-203ENST00000506441 RAB15P59190 212 aa13.69□□□□□ -0.22
RETREG1-203ENST00000506441 CYP4X1Q8N118 509 aa13.69□□□□□ -0.22
RETREG1-203ENST00000506441 PCDHB11Q9Y5F2 797 aa13.69□□□□□ -0.22
RETREG1-203ENST00000506441 TTC24A2A3L6 582 aaPredicted RBP13.68□□□□□ -0.22
RETREG1-203ENST00000506441 ATP1A2P50993 1020 aa13.68□□□□□ -0.22
RETREG1-203ENST00000506441 LARP1Q6PKG0 1096 aaKnown RBP13.67□□□□□ -0.22
RETREG1-203ENST00000506441 MKRN1Q9UHC7 482 aaKnown RBP13.67□□□□□ -0.22
RETREG1-203ENST00000506441 RBM19Q9Y4C8 960 aaKnown RBP13.67□□□□□ -0.22
RETREG1-203ENST00000506441 ALDH1A1P00352 501 aa13.66□□□□□ -0.22
RETREG1-203ENST00000506441 FSHRP23945 695 aa13.66□□□□□ -0.22
RETREG1-203ENST00000506441 NCOA4Q13772 614 aa13.66□□□□□ -0.22
RETREG1-203ENST00000506441 OXLD1Q5BKU9 147 aa13.66□□□□□ -0.22
RETREG1-203ENST00000506441 INTS6LQ5JSJ4 861 aaKnown RBP13.66□□□□□ -0.22
RETREG1-203ENST00000506441 PGPEP1Q9NXJ5 209 aa13.66□□□□□ -0.22
RETREG1-203ENST00000506441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.65□□□□□ -0.22
RETREG1-203ENST00000506441 CSB-PGBD3P0DP91 1061 aa13.65□□□□□ -0.22
RETREG1-203ENST00000506441 CCDC116Q8IYX3 515 aa13.65□□□□□ -0.22
RETREG1-203ENST00000506441 DEPDC4Q8N2C3 294 aa13.65□□□□□ -0.22
RETREG1-203ENST00000506441 TLL2Q9Y6L7 1015 aa13.65□□□□□ -0.22
RETREG1-203ENST00000506441 GRM5P41594 1212 aa13.64□□□□□ -0.23
RETREG1-203ENST00000506441 TRAF7Q6Q0C0 670 aa13.64□□□□□ -0.23
RETREG1-203ENST00000506441 CCDC85AQ96PX6 553 aaPredicted RBP13.64□□□□□ -0.23
RETREG1-203ENST00000506441 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
RETREG1-203ENST00000506441 ABCC9O60706 1549 aa13.63□□□□□ -0.23
RETREG1-203ENST00000506441 ERVH48-1M5A8F1 160 aa13.62□□□□□ -0.23
RETREG1-203ENST00000506441 PKD2L1Q9P0L9 805 aa13.62□□□□□ -0.23
RETREG1-203ENST00000506441 ATG7O95352 703 aa13.61□□□□□ -0.23
RETREG1-203ENST00000506441 RASA1P20936 1047 aa13.61□□□□□ -0.23
RETREG1-203ENST00000506441 MYT1Q01538 1121 aa13.61□□□□□ -0.23
RETREG1-203ENST00000506441 PRR20EP86478 221 aa13.6□□□□□ -0.23
RETREG1-203ENST00000506441 PRR20CP86479 221 aa13.6□□□□□ -0.23
RETREG1-203ENST00000506441 PRR20DP86480 221 aa13.6□□□□□ -0.23
RETREG1-203ENST00000506441 PRR20BP86481 221 aa13.6□□□□□ -0.23
RETREG1-203ENST00000506441 PRR20AP86496 221 aa13.6□□□□□ -0.23
RETREG1-203ENST00000506441 CDCA8Q53HL2 280 aa13.6□□□□□ -0.23
RETREG1-203ENST00000506441 KANK4Q5T7N3 995 aaPredicted RBP13.6□□□□□ -0.23
RETREG1-203ENST00000506441 FAM196BA6NMK8 535 aa13.59□□□□□ -0.23
RETREG1-203ENST00000506441 GDF9O60383 454 aa13.59□□□□□ -0.23
RETREG1-203ENST00000506441 PDIA4P13667 645 aaKnown RBP13.59□□□□□ -0.23
RETREG1-203ENST00000506441 CC2D2BQ6DHV5 1058 aa13.59□□□□□ -0.23
RETREG1-203ENST00000506441 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
RETREG1-203ENST00000506441 TSGA10IPQ3SY00 556 aa13.58□□□□□ -0.24
RETREG1-203ENST00000506441 PSME1Q06323 249 aa13.57□□□□□ -0.24
RETREG1-203ENST00000506441 PPP1R26Q5T8A7 1209 aaPredicted RBP13.57□□□□□ -0.24
RETREG1-203ENST00000506441 LARGE2Q8N3Y3 721 aa13.57□□□□□ -0.24
RETREG1-203ENST00000506441 DNAAF2Q9NVR5 837 aaKnown RBP13.57□□□□□ -0.24
RETREG1-203ENST00000506441 TNFRSF10AO00220 468 aa13.56□□□□□ -0.24
RETREG1-203ENST00000506441 GTF2IP78347 998 aa13.56□□□□□ -0.24
RETREG1-203ENST00000506441 NNTQ13423 1086 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms