RNA–Protein interactions for RNA: ENST00000506263.1

GFM2-204, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 4

Gene GFM2, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-204ENST00000506263 SENP2Q9HC62 589 aa14□□□□□ -0.17
GFM2-204ENST00000506263 DZIP3Q86Y13 1208 aaKnown RBP13.99□□□□□ -0.17
GFM2-204ENST00000506263 CCDC116Q8IYX3 515 aa13.99□□□□□ -0.17
GFM2-204ENST00000506263 ITPKCQ96DU7 683 aa13.99□□□□□ -0.17
GFM2-204ENST00000506263 NBPF20Q3BBV1 942 aa13.98□□□□□ -0.17
GFM2-204ENST00000506263 ZFAND3Q9H8U3 227 aa13.98□□□□□ -0.17
GFM2-204ENST00000506263 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
GFM2-204ENST00000506263 FBXO45P0C2W1 286 aa13.96□□□□□ -0.17
GFM2-204ENST00000506263 TRIM46Q7Z4K8 759 aa13.96□□□□□ -0.17
GFM2-204ENST00000506263 PRM3Q9NNZ6 103 aa13.96□□□□□ -0.17
GFM2-204ENST00000506263 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
GFM2-204ENST00000506263 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
GFM2-204ENST00000506263 DHX9Q08211 1270 aaKnown RBP13.93□□□□□ -0.18
GFM2-204ENST00000506263 PPP1R26Q5T8A7 1209 aaPredicted RBP13.93□□□□□ -0.18
GFM2-204ENST00000506263 PCDHB9Q9Y5E1 797 aa13.93□□□□□ -0.18
GFM2-204ENST00000506263 NR1H3Q13133 447 aa13.92□□□□□ -0.18
GFM2-204ENST00000506263 SCARF1Q14162 830 aa13.92□□□□□ -0.18
GFM2-204ENST00000506263 INTS6LQ5JSJ4 861 aaKnown RBP13.92□□□□□ -0.18
GFM2-204ENST00000506263 MRPL14Q6P1L8 145 aaKnown RBP13.92□□□□□ -0.18
GFM2-204ENST00000506263 PGPEP1Q9NXJ5 209 aa13.92□□□□□ -0.18
GFM2-204ENST00000506263 SNRPBP14678 240 aaKnown RBP13.91□□□□□ -0.18
GFM2-204ENST00000506263 GPR37L1O60883 481 aa13.9□□□□□ -0.18
GFM2-204ENST00000506263 RAB15P59190 212 aa13.9□□□□□ -0.18
GFM2-204ENST00000506263 TBC1D2BQ9UPU7 963 aa13.9□□□□□ -0.18
GFM2-204ENST00000506263 ZNF330Q9Y3S2 320 aaPredicted RBP13.89□□□□□ -0.19
GFM2-204ENST00000506263 UPP2O95045 317 aa13.88□□□□□ -0.19
GFM2-204ENST00000506263 ZFP42Q96MM3 310 aa13.88□□□□□ -0.19
GFM2-204ENST00000506263 PURBQ96QR8 312 aaKnown RBP13.88□□□□□ -0.19
GFM2-204ENST00000506263 ZNF775Q96BV0 537 aaPredicted RBP13.87□□□□□ -0.19
GFM2-204ENST00000506263 MCM6Q14566 821 aa13.86□□□□□ -0.19
GFM2-204ENST00000506263 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
GFM2-204ENST00000506263 MEIOBQ8N635 442 aa13.86□□□□□ -0.19
GFM2-204ENST00000506263 ZNF592Q92610 1267 aa13.86□□□□□ -0.19
GFM2-204ENST00000506263 ESPNB1AK53 854 aa13.85□□□□□ -0.19
GFM2-204ENST00000506263 C6orf118Q5T5N4 469 aa13.85□□□□□ -0.19
GFM2-204ENST00000506263 BMP2P12643 396 aa13.83□□□□□ -0.2
GFM2-204ENST00000506263 MCCD1P59942 119 aaPredicted RBP13.83□□□□□ -0.2
GFM2-204ENST00000506263 SEPT12Q8IYM1 358 aa13.83□□□□□ -0.2
GFM2-204ENST00000506263 LINC00528Q8N1L1 170 aa13.83□□□□□ -0.2
GFM2-204ENST00000506263 CBLBQ13191 982 aa13.82□□□□□ -0.2
GFM2-204ENST00000506263 TSEN34Q9BSV6 310 aaKnown RBP13.82□□□□□ -0.2
GFM2-204ENST00000506263 GDPD2Q9HCC8 539 aa13.82□□□□□ -0.2
GFM2-204ENST00000506263 ERVH48-1M5A8F1 160 aa13.81□□□□□ -0.2
GFM2-204ENST00000506263 GIGYF1O75420 1035 aaPredicted RBP13.81□□□□□ -0.2
GFM2-204ENST00000506263 TMPRSS4Q9NRS4 437 aa13.81□□□□□ -0.2
GFM2-204ENST00000506263 ABL2P42684 1182 aa13.8□□□□□ -0.2
GFM2-204ENST00000506263 Q6ZVU0 165 aa13.79□□□□□ -0.2
GFM2-204ENST00000506263 ZNF784Q8NCA9 323 aaPredicted RBP13.79□□□□□ -0.2
GFM2-204ENST00000506263 IRF5Q13568 498 aa13.78□□□□□ -0.2
GFM2-204ENST00000506263 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
GFM2-204ENST00000506263 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
GFM2-204ENST00000506263 CCDC125Q86Z20 511 aa13.76□□□□□ -0.21
GFM2-204ENST00000506263 EIF4G2P78344 907 aaKnown RBP eCLIP13.75□□□□□ -0.21
GFM2-204ENST00000506263 FLIIQ13045 1269 aa13.74□□□□□ -0.21
GFM2-204ENST00000506263 CYLDQ9NQC7 956 aa13.74□□□□□ -0.21
GFM2-204ENST00000506263 MAN1A2O60476 641 aa13.73□□□□□ -0.21
GFM2-204ENST00000506263 VAC14Q08AM6 782 aa13.73□□□□□ -0.21
GFM2-204ENST00000506263 AGBL1Q96MI9 1066 aa13.73□□□□□ -0.21
GFM2-204ENST00000506263 LILRA1O75019 489 aa13.72□□□□□ -0.21
GFM2-204ENST00000506263 RELBQ01201 579 aa13.72□□□□□ -0.21
GFM2-204ENST00000506263 COG6Q9Y2V7 657 aa13.72□□□□□ -0.21
GFM2-204ENST00000506263 WASHC4Q2M389 1173 aa13.71□□□□□ -0.21
GFM2-204ENST00000506263 SOBPA7XYQ1 873 aa13.7□□□□□ -0.22
GFM2-204ENST00000506263 ADH1AP07327 375 aa13.7□□□□□ -0.22
GFM2-204ENST00000506263 CEP126Q9P2H0 1117 aa13.7□□□□□ -0.22
GFM2-204ENST00000506263 SPINT1O43278 529 aa13.69□□□□□ -0.22
GFM2-204ENST00000506263 RAD21O60216 631 aa13.69□□□□□ -0.22
GFM2-204ENST00000506263 ADD1P35611 737 aaKnown RBP13.69□□□□□ -0.22
GFM2-204ENST00000506263 PCDHB11Q9Y5F2 797 aa13.69□□□□□ -0.22
GFM2-204ENST00000506263 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
GFM2-204ENST00000506263 TTLL8A6PVC2 850 aa13.68□□□□□ -0.22
GFM2-204ENST00000506263 TERTO14746 1132 aaKnown RBP13.68□□□□□ -0.22
GFM2-204ENST00000506263 UBTFP17480 764 aaKnown RBP13.68□□□□□ -0.22
GFM2-204ENST00000506263 TREML4Q6UXN2 200 aa13.68□□□□□ -0.22
GFM2-204ENST00000506263 WWC1Q8IX03 1113 aa13.67□□□□□ -0.22
GFM2-204ENST00000506263 ZNF395Q9H8N7 513 aaPredicted RBP13.67□□□□□ -0.22
GFM2-204ENST00000506263 NXF1Q9UBU9 619 aaKnown RBP13.67□□□□□ -0.22
GFM2-204ENST00000506263 WFS1O76024 890 aa13.66□□□□□ -0.22
GFM2-204ENST00000506263 ESF1Q9H501 851 aaKnown RBP13.66□□□□□ -0.22
GFM2-204ENST00000506263 ERVK-9P63128 1117 aa13.65□□□□□ -0.22
GFM2-204ENST00000506263 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
GFM2-204ENST00000506263 POM121Q96HA1 1249 aa13.65□□□□□ -0.22
GFM2-204ENST00000506263 INSM2Q96T92 566 aaPredicted RBP13.65□□□□□ -0.22
GFM2-204ENST00000506263 DNMT3LQ9UJW3 386 aa13.65□□□□□ -0.22
GFM2-204ENST00000506263 PTGIRP43119 386 aa13.64□□□□□ -0.23
GFM2-204ENST00000506263 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
GFM2-204ENST00000506263 POLMQ9NP87 494 aaPredicted RBP13.64□□□□□ -0.23
GFM2-204ENST00000506263 SLFNL1Q499Z3 407 aa13.63□□□□□ -0.23
GFM2-204ENST00000506263 FIGNL2A6NMB9 653 aa13.62□□□□□ -0.23
GFM2-204ENST00000506263 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
GFM2-204ENST00000506263 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
GFM2-204ENST00000506263 SEMA3FQ13275 785 aa13.62□□□□□ -0.23
GFM2-204ENST00000506263 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.62□□□□□ -0.23
GFM2-204ENST00000506263 SLC16A10Q8TF71 515 aa13.62□□□□□ -0.23
GFM2-204ENST00000506263 SOX11P35716 441 aa13.61□□□□□ -0.23
GFM2-204ENST00000506263 SCTRP47872 440 aa13.61□□□□□ -0.23
GFM2-204ENST00000506263 KDF1Q8NAX2 398 aaPredicted RBP13.61□□□□□ -0.23
GFM2-204ENST00000506263 RNF135Q8IUD6 432 aa13.6□□□□□ -0.23
GFM2-204ENST00000506263 NPAS3Q8IXF0 933 aa13.6□□□□□ -0.23
GFM2-204ENST00000506263 CCDC85AQ96PX6 553 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms