RNA–Protein interactions for RNA: ENST00000506263.1

GFM2-204, Transcript of G elongation factor mitochondrial 2, humanhuman

TSL 4

Gene GFM2, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM2-204ENST00000506263 AEBP2Q6ZN18 517 aaPredicted RBP38.17■■■■□ 3.7
GFM2-204ENST00000506263 CHIC1Q5VXU3 224 aa36.99■■■■□ 3.51
GFM2-204ENST00000506263 SENP3Q9H4L4 574 aaPredicted RBP32.52■■■□□ 2.8
GFM2-204ENST00000506263 PHF23Q9BUL5 403 aaPredicted RBP32.46■■■□□ 2.79
GFM2-204ENST00000506263 FOXD1Q16676 465 aa30.18■■■□□ 2.42
GFM2-204ENST00000506263 PLPPR3Q6T4P5 718 aa29.92■■■□□ 2.38
GFM2-204ENST00000506263 PPP6R1Q9UPN7 881 aa28.76■■■□□ 2.19
GFM2-204ENST00000506263 ADRA2BP18089 450 aa28.74■■■□□ 2.19
GFM2-204ENST00000506263 PIAS4Q8N2W9 510 aaPredicted RBP28.43■■■□□ 2.14
GFM2-204ENST00000506263 MSH5O43196 834 aa28.01■■■□□ 2.07
GFM2-204ENST00000506263 SCAF1Q9H7N4 1312 aaKnown RBP26.37■■□□□ 1.81
GFM2-204ENST00000506263 PPP4R3CPQ6ZMV5 832 aa26.31■■□□□ 1.8
GFM2-204ENST00000506263 MAPK8IP2Q13387 824 aaPredicted RBP26.17■■□□□ 1.78
GFM2-204ENST00000506263 POTEDQ86YR6 584 aa26.06■■□□□ 1.76
GFM2-204ENST00000506263 DMRT2Q9Y5R5 561 aa25.87■■□□□ 1.73
GFM2-204ENST00000506263 CNKSR2Q8WXI2 1034 aa25.66■■□□□ 1.7
GFM2-204ENST00000506263 NCBP3Q53F19 620 aaKnown RBP25.57■■□□□ 1.68
GFM2-204ENST00000506263 KCNA4P22459 653 aa25.31■■□□□ 1.64
GFM2-204ENST00000506263 RNF216Q9NWF9 866 aaPredicted RBP25.23■■□□□ 1.63
GFM2-204ENST00000506263 HOXD11P31277 338 aaPredicted RBP25.2■■□□□ 1.62
GFM2-204ENST00000506263 NPM3O75607 178 aaKnown RBP25.13■■□□□ 1.61
GFM2-204ENST00000506263 DCAF8L1A6NGE4 600 aa24.86■■□□□ 1.57
GFM2-204ENST00000506263 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
GFM2-204ENST00000506263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.09■■□□□ 1.45
GFM2-204ENST00000506263 SLC4A1APQ9BWU0 796 aaKnown RBP24.08■■□□□ 1.45
GFM2-204ENST00000506263 RNF39Q9H2S5 420 aa23.94■■□□□ 1.42
GFM2-204ENST00000506263 SLC4A2P04920 1241 aa23.8■■□□□ 1.4
GFM2-204ENST00000506263 C1QBPQ07021 282 aaKnown RBP23.65■■□□□ 1.38
GFM2-204ENST00000506263 CACNB1Q02641 598 aaPredicted RBP23.62■■□□□ 1.37
GFM2-204ENST00000506263 U3KPZ7 1027 aaPredicted RBP23.6■■□□□ 1.37
GFM2-204ENST00000506263 FOXD4L1Q9NU39 408 aa23.41■■□□□ 1.34
GFM2-204ENST00000506263 ZBTB22O15209 634 aa23.26■■□□□ 1.31
GFM2-204ENST00000506263 MYCNP04198 464 aaPredicted RBP23.26■■□□□ 1.31
GFM2-204ENST00000506263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
GFM2-204ENST00000506263 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
GFM2-204ENST00000506263 SAMD1Q6SPF0 538 aaPredicted RBP23.14■■□□□ 1.29
GFM2-204ENST00000506263 APLP2Q06481 763 aa23.11■■□□□ 1.29
GFM2-204ENST00000506263 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
GFM2-204ENST00000506263 CAPN15O75808 1086 aa23.02■■□□□ 1.28
GFM2-204ENST00000506263 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
GFM2-204ENST00000506263 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
GFM2-204ENST00000506263 TRHP20396 242 aaPredicted RBP22.83■■□□□ 1.25
GFM2-204ENST00000506263 ZNF219Q9P2Y4 722 aaPredicted RBP22.81■■□□□ 1.24
GFM2-204ENST00000506263 DSG3P32926 999 aa22.65■■□□□ 1.22
GFM2-204ENST00000506263 ATXN8OSP0DMR3 200 aa22.62■■□□□ 1.21
GFM2-204ENST00000506263 ATF5Q9Y2D1 282 aaPredicted RBP22.62■■□□□ 1.21
GFM2-204ENST00000506263 ABCB7O75027 752 aa22.54■■□□□ 1.2
GFM2-204ENST00000506263 POLA2Q14181 598 aa22.36■■□□□ 1.17
GFM2-204ENST00000506263 ZBTB12Q9Y330 459 aaPredicted RBP22■■□□□ 1.11
GFM2-204ENST00000506263 FBLN2P98095 1184 aa21.78■■□□□ 1.08
GFM2-204ENST00000506263 RBM42Q9BTD8 480 aaKnown RBP21.66■■□□□ 1.06
GFM2-204ENST00000506263 MKRN4PQ13434 485 aaPredicted RBP21.62■■□□□ 1.05
GFM2-204ENST00000506263 OSCARQ8IYS5 282 aa21.61■■□□□ 1.05
GFM2-204ENST00000506263 SPDYE2BA6NHP3 402 aa21.35■■□□□ 1.01
GFM2-204ENST00000506263 SPDYE6P0CI01 402 aa21.35■■□□□ 1.01
GFM2-204ENST00000506263 SPDYE2Q495Y8 402 aa21.35■■□□□ 1.01
GFM2-204ENST00000506263 AKT1S1Q96B36 256 aa21.29■■□□□ 1
GFM2-204ENST00000506263 ZNF692Q9BU19 519 aaPredicted RBP21.23■□□□□ 0.99
GFM2-204ENST00000506263 SSUH2Q9Y2M2 353 aa21.11■□□□□ 0.97
GFM2-204ENST00000506263 REM2Q8IYK8 340 aaPredicted RBP21.08■□□□□ 0.97
GFM2-204ENST00000506263 SPDYE4A6NLX3 237 aa21.03■□□□□ 0.96
GFM2-204ENST00000506263 PABPN1Q86U42 306 aaKnown RBP eCLIP20.93■□□□□ 0.94
GFM2-204ENST00000506263 CHRDL2Q6WN34 429 aa20.87■□□□□ 0.93
GFM2-204ENST00000506263 PITPNM1O00562 1244 aa20.84■□□□□ 0.93
GFM2-204ENST00000506263 SPDYE1Q8NFV5 336 aaPredicted RBP20.81■□□□□ 0.92
GFM2-204ENST00000506263 CLEC11AQ9Y240 323 aa20.76■□□□□ 0.91
GFM2-204ENST00000506263 FKBP8Q14318 412 aa20.73■□□□□ 0.91
GFM2-204ENST00000506263 POTEHQ6S545 545 aa20.59■□□□□ 0.89
GFM2-204ENST00000506263 PROM2Q8N271 834 aa20.57■□□□□ 0.88
GFM2-204ENST00000506263 STAG3Q9UJ98 1225 aa20.53■□□□□ 0.88
GFM2-204ENST00000506263 PRR29P0C7W0 189 aa20.52■□□□□ 0.88
GFM2-204ENST00000506263 PIP4P2Q8N4L2 257 aa20.52■□□□□ 0.88
GFM2-204ENST00000506263 FXR2P51116 673 aaKnown RBP eCLIP20.49■□□□□ 0.87
GFM2-204ENST00000506263 PRKAR2AP13861 404 aaKnown RBP20.33■□□□□ 0.85
GFM2-204ENST00000506263 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
GFM2-204ENST00000506263 CREBZFQ9NS37 354 aa20.12■□□□□ 0.81
GFM2-204ENST00000506263 FBXO3Q9UK99 471 aa20.11■□□□□ 0.81
GFM2-204ENST00000506263 FARP1Q9Y4F1 1045 aaPredicted RBP20.03■□□□□ 0.8
GFM2-204ENST00000506263 MIER1Q8N108 512 aa20■□□□□ 0.79
GFM2-204ENST00000506263 HAX1O00165 279 aa19.99■□□□□ 0.79
GFM2-204ENST00000506263 PLEKHG5O94827 1062 aa19.97■□□□□ 0.79
GFM2-204ENST00000506263 PLCD3Q8N3E9 789 aa19.95■□□□□ 0.78
GFM2-204ENST00000506263 NPM1P06748 294 aaKnown RBP eCLIP19.84■□□□□ 0.77
GFM2-204ENST00000506263 MNX1P50219 401 aaPredicted RBP19.84■□□□□ 0.77
GFM2-204ENST00000506263 VASPP50552 380 aaPredicted RBP19.82■□□□□ 0.76
GFM2-204ENST00000506263 C19orf67A6NJJ6 358 aa19.81■□□□□ 0.76
GFM2-204ENST00000506263 ZBTB47Q9UFB7 747 aaPredicted RBP19.75■□□□□ 0.75
GFM2-204ENST00000506263 CD44P16070 742 aaKnown RBP19.74■□□□□ 0.75
GFM2-204ENST00000506263 EVX2Q03828 476 aa19.72■□□□□ 0.75
GFM2-204ENST00000506263 SP7Q8TDD2 431 aaPredicted RBP19.64■□□□□ 0.73
GFM2-204ENST00000506263 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
GFM2-204ENST00000506263 KLHL34Q8N239 644 aa19.61■□□□□ 0.73
GFM2-204ENST00000506263 ZRANB1Q9UGI0 708 aa19.58■□□□□ 0.72
GFM2-204ENST00000506263 IFNLR1Q8IU57 520 aaPredicted RBP19.49■□□□□ 0.71
GFM2-204ENST00000506263 TSPYL2Q9H2G4 693 aaPredicted RBP19.49■□□□□ 0.71
GFM2-204ENST00000506263 RASEFQ8IZ41 740 aa19.48■□□□□ 0.71
GFM2-204ENST00000506263 NUBP1P53384 320 aa19.46■□□□□ 0.71
GFM2-204ENST00000506263 ZNF579Q8NAF0 562 aaKnown RBP19.44■□□□□ 0.7
GFM2-204ENST00000506263 FAM212AQ96EL1 285 aa19.38■□□□□ 0.69
GFM2-204ENST00000506263 SPOCK2Q92563 424 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms