RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SPATA31A1Q5TZJ5 1347 aa24.74■■□□□ 1.55
SMN1-204ENST00000506163 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
SMN1-204ENST00000506163 NSD3Q9BZ95 1437 aa24.74■■□□□ 1.55
SMN1-204ENST00000506163 KIF7Q2M1P5 1343 aa24.73■■□□□ 1.55
SMN1-204ENST00000506163 COG3Q96JB2 828 aa24.72■■□□□ 1.55
SMN1-204ENST00000506163 PANK3Q9H999 370 aa24.71■■□□□ 1.55
SMN1-204ENST00000506163 RGPD5Q99666 1765 aa24.71■■□□□ 1.55
SMN1-204ENST00000506163 USP35Q9P2H5 1018 aa24.7■■□□□ 1.55
SMN1-204ENST00000506163 UPF1Q92900 1129 aaKnown RBP eCLIP24.69■■□□□ 1.54
SMN1-204ENST00000506163 BRWD3Q6RI45 1802 aa24.69■■□□□ 1.54
SMN1-204ENST00000506163 LTN1O94822 1766 aa24.66■■□□□ 1.54
SMN1-204ENST00000506163 MAP3K19Q56UN5 1328 aa24.65■■□□□ 1.54
SMN1-204ENST00000506163 KIF20BQ96Q89 1820 aa24.65■■□□□ 1.54
SMN1-204ENST00000506163 CRB1P82279 1406 aa24.64■■□□□ 1.54
SMN1-204ENST00000506163 BARGINQ6ZT62 677 aa24.64■■□□□ 1.54
SMN1-204ENST00000506163 WDR17Q8IZU2 1322 aa24.64■■□□□ 1.54
SMN1-204ENST00000506163 TCP11L2Q8N4U5 519 aa24.64■■□□□ 1.54
SMN1-204ENST00000506163 EP400Q96L91 3159 aa24.64■■□□□ 1.54
SMN1-204ENST00000506163 THSD7AQ9UPZ6 1657 aa24.63■■□□□ 1.53
SMN1-204ENST00000506163 RRS1Q15050 365 aaKnown RBP24.63■■□□□ 1.53
SMN1-204ENST00000506163 ABCC6O95255 1503 aa24.63■■□□□ 1.53
SMN1-204ENST00000506163 WASHC2AQ641Q2 1341 aa24.62■■□□□ 1.53
SMN1-204ENST00000506163 A0A0G2JS52 829 aa24.62■■□□□ 1.53
SMN1-204ENST00000506163 MYT1Q01538 1121 aa24.62■■□□□ 1.53
SMN1-204ENST00000506163 TOM1L2Q6ZVM7 507 aa24.62■■□□□ 1.53
SMN1-204ENST00000506163 IP6K1Q92551 441 aa24.62■■□□□ 1.53
SMN1-204ENST00000506163 CGNL1Q0VF96 1302 aa24.62■■□□□ 1.53
SMN1-204ENST00000506163 KRT27Q7Z3Y8 459 aa24.61■■□□□ 1.53
SMN1-204ENST00000506163 CCDC7Q96M83 1385 aa24.6■■□□□ 1.53
SMN1-204ENST00000506163 ERBB3P21860 1342 aa24.59■■□□□ 1.53
SMN1-204ENST00000506163 HOXC9P31274 260 aa24.59■■□□□ 1.53
SMN1-204ENST00000506163 FAM182BQ5T319 152 aa24.59■■□□□ 1.53
SMN1-204ENST00000506163 THRAP3Q9Y2W1 955 aaKnown RBP24.59■■□□□ 1.53
SMN1-204ENST00000506163 CSB-PGBD3P0DP91 1061 aa24.58■■□□□ 1.53
SMN1-204ENST00000506163 ANKRD24Q8TF21 1146 aa24.58■■□□□ 1.53
SMN1-204ENST00000506163 CARD10Q9BWT7 1032 aa24.58■■□□□ 1.53
SMN1-204ENST00000506163 AMPHP49418 695 aa24.56■■□□□ 1.52
SMN1-204ENST00000506163 PER1O15534 1290 aaPredicted RBP24.55■■□□□ 1.52
SMN1-204ENST00000506163 BLMP54132 1417 aaPredicted RBP24.55■■□□□ 1.52
SMN1-204ENST00000506163 LTV1Q96GA3 475 aaPredicted RBP24.54■■□□□ 1.52
SMN1-204ENST00000506163 EMILIN1Q9Y6C2 1016 aa24.53■■□□□ 1.52
SMN1-204ENST00000506163 PEAK1Q9H792 1746 aa24.53■■□□□ 1.52
SMN1-204ENST00000506163 AMER1Q5JTC6 1135 aaPredicted RBP24.52■■□□□ 1.52
SMN1-204ENST00000506163 NLRP2Q9NX02 1062 aa24.52■■□□□ 1.52
SMN1-204ENST00000506163 HSP90AB2PQ58FF8 381 aa24.52■■□□□ 1.52
SMN1-204ENST00000506163 TNNT2P45379 298 aaPredicted RBP24.51■■□□□ 1.51
SMN1-204ENST00000506163 KNSTRNQ9Y448 316 aa24.51■■□□□ 1.51
SMN1-204ENST00000506163 DISP2A7MBM2 1401 aa24.51■■□□□ 1.51
SMN1-204ENST00000506163 RTL1A6NKG5 1358 aa24.5■■□□□ 1.51
SMN1-204ENST00000506163 POLKQ9UBT6 870 aa24.5■■□□□ 1.51
SMN1-204ENST00000506163 PARP4Q9UKK3 1724 aaKnown RBP24.48■■□□□ 1.51
SMN1-204ENST00000506163 ANKRD26Q9UPS8 1709 aa24.48■■□□□ 1.51
SMN1-204ENST00000506163 MAP2P11137 1827 aaKnown RBP24.47■■□□□ 1.51
SMN1-204ENST00000506163 PDE3BQ13370 1112 aa24.46■■□□□ 1.51
SMN1-204ENST00000506163 WNK3Q9BYP7 1800 aa24.46■■□□□ 1.51
SMN1-204ENST00000506163 NSD2O96028 1365 aa24.46■■□□□ 1.51
SMN1-204ENST00000506163 INSRP06213 1382 aa24.46■■□□□ 1.51
SMN1-204ENST00000506163 FLT4P35916 1363 aa24.46■■□□□ 1.51
SMN1-204ENST00000506163 RGPD2P0DJD1 1756 aa24.45■■□□□ 1.51
SMN1-204ENST00000506163 LRRC37A3O60309 1634 aa24.44■■□□□ 1.5
SMN1-204ENST00000506163 PPM1GO15355 546 aaPredicted RBP24.44■■□□□ 1.5
SMN1-204ENST00000506163 DDB1Q16531 1140 aa24.44■■□□□ 1.5
SMN1-204ENST00000506163 NBPF6Q5VWK0 638 aa24.44■■□□□ 1.5
SMN1-204ENST00000506163 NBPF4Q96M43 638 aa24.44■■□□□ 1.5
SMN1-204ENST00000506163 CDCA7Q9BWT1 371 aaPredicted RBP24.44■■□□□ 1.5
SMN1-204ENST00000506163 KIF24Q5T7B8 1368 aa24.44■■□□□ 1.5
SMN1-204ENST00000506163 MORC1Q86VD1 984 aa24.44■■□□□ 1.5
SMN1-204ENST00000506163 CCDC125Q86Z20 511 aa24.43■■□□□ 1.5
SMN1-204ENST00000506163 MARCH10Q8NA82 808 aaPredicted RBP24.42■■□□□ 1.5
SMN1-204ENST00000506163 IL2RBP14784 551 aa24.41■■□□□ 1.5
SMN1-204ENST00000506163 FAM196AQ6ZSG2 479 aa24.41■■□□□ 1.5
SMN1-204ENST00000506163 FAM208AQ9UK61 1670 aaKnown RBP24.4■■□□□ 1.5
SMN1-204ENST00000506163 USHBP1Q8N6Y0 703 aa24.4■■□□□ 1.5
SMN1-204ENST00000506163 EXOC5O00471 708 aa24.39■■□□□ 1.5
SMN1-204ENST00000506163 CC2D1BQ5T0F9 858 aaKnown RBP24.39■■□□□ 1.5
SMN1-204ENST00000506163 DEFB132Q7Z7B7 95 aa24.39■■□□□ 1.5
SMN1-204ENST00000506163 TRIM37O94972 964 aa24.37■■□□□ 1.49
SMN1-204ENST00000506163 TNS2Q63HR2 1409 aa24.34■■□□□ 1.49
SMN1-204ENST00000506163 SMG6Q86US8 1419 aaKnown RBP24.34■■□□□ 1.49
SMN1-204ENST00000506163 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
SMN1-204ENST00000506163 MEGF6O75095 1541 aa24.34■■□□□ 1.49
SMN1-204ENST00000506163 CNGB1Q14028 1251 aaPredicted RBP24.34■■□□□ 1.49
SMN1-204ENST00000506163 EIF4A2Q14240 407 aaKnown RBP24.34■■□□□ 1.49
SMN1-204ENST00000506163 PTF1AQ7RTS3 328 aa24.34■■□□□ 1.49
SMN1-204ENST00000506163 EYA1Q99502 592 aa24.33■■□□□ 1.49
SMN1-204ENST00000506163 OVOS2A0A0G2JMS6 1433 aa24.32■■□□□ 1.48
SMN1-204ENST00000506163 ZEB1P37275 1124 aaPredicted RBP24.32■■□□□ 1.48
SMN1-204ENST00000506163 SF3B2Q13435 895 aaKnown RBP24.31■■□□□ 1.48
SMN1-204ENST00000506163 TNS1Q9HBL0 1735 aaKnown RBP24.3■■□□□ 1.48
SMN1-204ENST00000506163 BCL9O00512 1426 aa24.3■■□□□ 1.48
SMN1-204ENST00000506163 NCAPD2Q15021 1401 aa24.3■■□□□ 1.48
SMN1-204ENST00000506163 SBF2Q86WG5 1849 aa24.28■■□□□ 1.48
SMN1-204ENST00000506163 RGPD1P0DJD0 1748 aa24.28■■□□□ 1.48
SMN1-204ENST00000506163 MTHFSP49914 203 aa24.28■■□□□ 1.48
SMN1-204ENST00000506163 EN1Q05925 392 aaPredicted RBP24.28■■□□□ 1.48
SMN1-204ENST00000506163 DDX54Q8TDD1 881 aaKnown RBP24.27■■□□□ 1.48
SMN1-204ENST00000506163 APBA3O96018 575 aa24.26■■□□□ 1.47
SMN1-204ENST00000506163 BAG6P46379 1132 aa24.26■■□□□ 1.47
SMN1-204ENST00000506163 ZCRB1Q8TBF4 217 aaKnown RBP24.26■■□□□ 1.47
SMN1-204ENST00000506163 KCNQ2O43526 872 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms