RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 USP6P35125 1406 aa11.83□□□□□ -0.52
SNF8-204ENST00000506104 PIK3C2AO00443 1686 aa11.82□□□□□ -0.52
SNF8-204ENST00000506104 ZBTB7AO95365 584 aa11.82□□□□□ -0.52
SNF8-204ENST00000506104 PTF1AQ7RTS3 328 aa11.82□□□□□ -0.52
SNF8-204ENST00000506104 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
SNF8-204ENST00000506104 C11orf95C9JLR9 678 aaPredicted RBP11.81□□□□□ -0.52
SNF8-204ENST00000506104 AXIN2Q9Y2T1 843 aa11.81□□□□□ -0.52
SNF8-204ENST00000506104 AATKQ6ZMQ8 1374 aa11.8□□□□□ -0.52
SNF8-204ENST00000506104 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.8□□□□□ -0.52
SNF8-204ENST00000506104 L3MBTL2Q969R5 705 aa11.8□□□□□ -0.52
SNF8-204ENST00000506104 SIN3AQ96ST3 1273 aa11.8□□□□□ -0.52
SNF8-204ENST00000506104 STK32BQ9NY57 414 aa11.8□□□□□ -0.52
SNF8-204ENST00000506104 WDR17Q8IZU2 1322 aa11.8□□□□□ -0.52
SNF8-204ENST00000506104 TRPM1Q7Z4N2 1603 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 EXOC5O00471 708 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 MSH5O43196 834 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 MARCH10Q8NA82 808 aaPredicted RBP11.79□□□□□ -0.52
SNF8-204ENST00000506104 KCNH5Q8NCM2 988 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 TMC1Q8TDI8 760 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 ACSBG1Q96GR2 724 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
SNF8-204ENST00000506104 PEAK1Q9H792 1746 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 SLIT3O75094 1523 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 TTC21BQ7Z4L5 1316 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 COL18A1P39060 1754 aa11.79□□□□□ -0.52
SNF8-204ENST00000506104 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
SNF8-204ENST00000506104 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
SNF8-204ENST00000506104 CPSF1Q10570 1443 aaKnown RBP11.78□□□□□ -0.52
SNF8-204ENST00000506104 KLHL34Q8N239 644 aa11.78□□□□□ -0.52
SNF8-204ENST00000506104 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
SNF8-204ENST00000506104 NLRP2Q9NX02 1062 aa11.78□□□□□ -0.52
SNF8-204ENST00000506104 KTN1Q86UP2 1357 aaKnown RBP11.78□□□□□ -0.52
SNF8-204ENST00000506104 PLSCR1O15162 318 aa11.77□□□□□ -0.53
SNF8-204ENST00000506104 TXNRD1Q16881 649 aa11.77□□□□□ -0.53
SNF8-204ENST00000506104 ZNF692Q9BU19 519 aaPredicted RBP11.77□□□□□ -0.53
SNF8-204ENST00000506104 CDCA7Q9BWT1 371 aaPredicted RBP11.77□□□□□ -0.53
SNF8-204ENST00000506104 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.53
SNF8-204ENST00000506104 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.53
SNF8-204ENST00000506104 MYOM1P52179 1685 aa11.76□□□□□ -0.53
SNF8-204ENST00000506104 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
SNF8-204ENST00000506104 LTN1O94822 1766 aa11.76□□□□□ -0.53
SNF8-204ENST00000506104 NINLQ9Y2I6 1382 aa11.76□□□□□ -0.53
SNF8-204ENST00000506104 CASZ1Q86V15 1759 aa11.75□□□□□ -0.53
SNF8-204ENST00000506104 CARD10Q9BWT7 1032 aa11.75□□□□□ -0.53
SNF8-204ENST00000506104 LTV1Q96GA3 475 aaPredicted RBP11.74□□□□□ -0.53
SNF8-204ENST00000506104 TTC21AQ8NDW8 1320 aa11.74□□□□□ -0.53
SNF8-204ENST00000506104 SLC15A2Q16348 729 aa11.73□□□□□ -0.53
SNF8-204ENST00000506104 NME9Q86XW9 330 aa11.73□□□□□ -0.53
SNF8-204ENST00000506104 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
SNF8-204ENST00000506104 PROM2Q8N271 834 aa11.73□□□□□ -0.53
SNF8-204ENST00000506104 CCDC7Q96M83 1385 aa11.73□□□□□ -0.53
SNF8-204ENST00000506104 MON2Q7Z3U7 1717 aa11.72□□□□□ -0.53
SNF8-204ENST00000506104 HDGFL2Q7Z4V5 671 aaPredicted RBP11.72□□□□□ -0.53
SNF8-204ENST00000506104 FHDC1Q9C0D6 1143 aaPredicted RBP11.72□□□□□ -0.53
SNF8-204ENST00000506104 CHD4Q14839 1912 aa11.71□□□□□ -0.53
SNF8-204ENST00000506104 IL2RBP14784 551 aa11.71□□□□□ -0.53
SNF8-204ENST00000506104 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.53
SNF8-204ENST00000506104 ANKRD24Q8TF21 1146 aa11.71□□□□□ -0.53
SNF8-204ENST00000506104 SYTL4Q96C24 671 aaPredicted RBP11.71□□□□□ -0.53
SNF8-204ENST00000506104 CARD11Q9BXL7 1154 aa11.71□□□□□ -0.53
SNF8-204ENST00000506104 BTAF1O14981 1849 aa11.71□□□□□ -0.54
SNF8-204ENST00000506104 NFAT5O94916 1531 aa11.7□□□□□ -0.54
SNF8-204ENST00000506104 TNS2Q63HR2 1409 aa11.7□□□□□ -0.54
SNF8-204ENST00000506104 NHSQ6T4R5 1651 aa11.7□□□□□ -0.54
SNF8-204ENST00000506104 MTFR1LQ9H019 292 aa11.69□□□□□ -0.54
SNF8-204ENST00000506104 PTGER2P43116 358 aa11.68□□□□□ -0.54
SNF8-204ENST00000506104 GPR162Q16538 588 aa11.68□□□□□ -0.54
SNF8-204ENST00000506104 ARXQ96QS3 562 aa11.68□□□□□ -0.54
SNF8-204ENST00000506104 SYT17Q9BSW7 474 aa11.68□□□□□ -0.54
SNF8-204ENST00000506104 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
SNF8-204ENST00000506104 ERBB3P21860 1342 aa11.67□□□□□ -0.54
SNF8-204ENST00000506104 TERF2IPQ9NYB0 399 aa11.67□□□□□ -0.54
SNF8-204ENST00000506104 KCNQ4P56696 695 aa11.66□□□□□ -0.54
SNF8-204ENST00000506104 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
SNF8-204ENST00000506104 RGPD2P0DJD1 1756 aa11.66□□□□□ -0.54
SNF8-204ENST00000506104 ABCC6O95255 1503 aa11.65□□□□□ -0.54
SNF8-204ENST00000506104 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
SNF8-204ENST00000506104 POLD1P28340 1107 aa11.65□□□□□ -0.54
SNF8-204ENST00000506104 AMPHP49418 695 aa11.65□□□□□ -0.54
SNF8-204ENST00000506104 ZNF827Q17R98 1081 aa11.65□□□□□ -0.54
SNF8-204ENST00000506104 BCL9O00512 1426 aa11.65□□□□□ -0.54
SNF8-204ENST00000506104 TFCP2L1Q9NZI6 479 aa11.64□□□□□ -0.55
SNF8-204ENST00000506104 USP31Q70CQ4 1352 aa11.64□□□□□ -0.55
SNF8-204ENST00000506104 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
SNF8-204ENST00000506104 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
SNF8-204ENST00000506104 COG3Q96JB2 828 aa11.63□□□□□ -0.55
SNF8-204ENST00000506104 SBNO2Q9Y2G9 1366 aa11.63□□□□□ -0.55
SNF8-204ENST00000506104 EDC4Q6P2E9 1401 aaKnown RBP11.62□□□□□ -0.55
SNF8-204ENST00000506104 FBLN1P23142 703 aa11.62□□□□□ -0.55
SNF8-204ENST00000506104 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
SNF8-204ENST00000506104 LRRC4BQ9NT99 713 aa11.62□□□□□ -0.55
SNF8-204ENST00000506104 A0A1W2PP64 1363 aa11.62□□□□□ -0.55
SNF8-204ENST00000506104 TUBGCP6Q96RT7 1819 aa11.62□□□□□ -0.55
SNF8-204ENST00000506104 IP6K1Q92551 441 aa11.61□□□□□ -0.55
SNF8-204ENST00000506104 CD163L1Q9NR16 1453 aa11.61□□□□□ -0.55
SNF8-204ENST00000506104 USP54Q70EL1 1684 aa11.61□□□□□ -0.55
SNF8-204ENST00000506104 FAM208AQ9UK61 1670 aaKnown RBP11.61□□□□□ -0.55
SNF8-204ENST00000506104 PAPPAQ13219 1627 aa11.6□□□□□ -0.55
SNF8-204ENST00000506104 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
SNF8-204ENST00000506104 CCNL1Q9UK58 526 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms