RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
PDCD6-203ENST00000505526 CABP1Q9NZU7 370 aa22.2■■□□□ 1.14
PDCD6-203ENST00000505526 RGPD3A6NKT7 1758 aaPredicted RBP22.2■■□□□ 1.14
PDCD6-203ENST00000505526 RGPD4Q7Z3J3 1758 aa22.2■■□□□ 1.14
PDCD6-203ENST00000505526 USP6P35125 1406 aa22.2■■□□□ 1.14
PDCD6-203ENST00000505526 SLIT3O75094 1523 aa22.19■■□□□ 1.14
PDCD6-203ENST00000505526 BCL11BQ9C0K0 894 aaPredicted RBP22.18■■□□□ 1.14
PDCD6-203ENST00000505526 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
PDCD6-203ENST00000505526 SBF2Q86WG5 1849 aa22.18■■□□□ 1.14
PDCD6-203ENST00000505526 PTF1AQ7RTS3 328 aa22.17■■□□□ 1.14
PDCD6-203ENST00000505526 ANO8Q9HCE9 1232 aaPredicted RBP22.17■■□□□ 1.14
PDCD6-203ENST00000505526 WDR17Q8IZU2 1322 aa22.15■■□□□ 1.14
PDCD6-203ENST00000505526 QRICH2Q9H0J4 1663 aa22.15■■□□□ 1.14
PDCD6-203ENST00000505526 MARCH10Q8NA82 808 aaPredicted RBP22.15■■□□□ 1.14
PDCD6-203ENST00000505526 AXIN2Q9Y2T1 843 aa22.15■■□□□ 1.14
PDCD6-203ENST00000505526 COL18A1P39060 1754 aa22.14■■□□□ 1.14
PDCD6-203ENST00000505526 CASZ1Q86V15 1759 aa22.13■■□□□ 1.13
PDCD6-203ENST00000505526 PROM2Q8N271 834 aa22.13■■□□□ 1.13
PDCD6-203ENST00000505526 CDCA7Q9BWT1 371 aaPredicted RBP22.13■■□□□ 1.13
PDCD6-203ENST00000505526 PDGFDQ9GZP0 370 aaPredicted RBP22.13■■□□□ 1.13
PDCD6-203ENST00000505526 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
PDCD6-203ENST00000505526 PIK3C2AO00443 1686 aa22.12■■□□□ 1.13
PDCD6-203ENST00000505526 WNK3Q9BYP7 1800 aa22.11■■□□□ 1.13
PDCD6-203ENST00000505526 BCL9O00512 1426 aa22.11■■□□□ 1.13
PDCD6-203ENST00000505526 CPSF1Q10570 1443 aaKnown RBP22.11■■□□□ 1.13
PDCD6-203ENST00000505526 ZBTB7AO95365 584 aa22.1■■□□□ 1.13
PDCD6-203ENST00000505526 ARHGEF25Q86VW2 580 aa22.09■■□□□ 1.13
PDCD6-203ENST00000505526 AKAP12Q02952 1782 aa22.09■■□□□ 1.13
PDCD6-203ENST00000505526 KCNH5Q8NCM2 988 aa22.09■■□□□ 1.13
PDCD6-203ENST00000505526 EVC2Q86UK5 1308 aa22.08■■□□□ 1.13
PDCD6-203ENST00000505526 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.12
PDCD6-203ENST00000505526 CARD10Q9BWT7 1032 aa22.08■■□□□ 1.12
PDCD6-203ENST00000505526 PTGER2P43116 358 aa22.07■■□□□ 1.12
PDCD6-203ENST00000505526 TXNRD1Q16881 649 aa22.07■■□□□ 1.12
PDCD6-203ENST00000505526 CARD11Q9BXL7 1154 aa22.07■■□□□ 1.12
PDCD6-203ENST00000505526 STK32BQ9NY57 414 aa22.07■■□□□ 1.12
PDCD6-203ENST00000505526 TTC21BQ7Z4L5 1316 aa22.07■■□□□ 1.12
PDCD6-203ENST00000505526 SOX12O15370 315 aa22.06■■□□□ 1.12
PDCD6-203ENST00000505526 ZNF692Q9BU19 519 aaPredicted RBP22.06■■□□□ 1.12
PDCD6-203ENST00000505526 ATF5Q9Y2D1 282 aaPredicted RBP22.06■■□□□ 1.12
PDCD6-203ENST00000505526 EXOC5O00471 708 aa22.05■■□□□ 1.12
PDCD6-203ENST00000505526 MYOM1P52179 1685 aa22.05■■□□□ 1.12
PDCD6-203ENST00000505526 RGPD5Q99666 1765 aa22.04■■□□□ 1.12
PDCD6-203ENST00000505526 SLC15A2Q16348 729 aa22.03■■□□□ 1.12
PDCD6-203ENST00000505526 TTC21AQ8NDW8 1320 aa22.03■■□□□ 1.12
PDCD6-203ENST00000505526 CCDC7Q96M83 1385 aa22.01■■□□□ 1.11
PDCD6-203ENST00000505526 NFAT5O94916 1531 aa22■■□□□ 1.11
PDCD6-203ENST00000505526 SYT17Q9BSW7 474 aa21.99■■□□□ 1.11
PDCD6-203ENST00000505526 FHDC1Q9C0D6 1143 aaPredicted RBP21.99■■□□□ 1.11
PDCD6-203ENST00000505526 MTFR1LQ9H019 292 aa21.99■■□□□ 1.11
PDCD6-203ENST00000505526 TNS2Q63HR2 1409 aa21.98■■□□□ 1.11
PDCD6-203ENST00000505526 USP47Q96K76 1375 aa21.98■■□□□ 1.11
PDCD6-203ENST00000505526 ZNF784Q8NCA9 323 aaPredicted RBP21.97■■□□□ 1.11
PDCD6-203ENST00000505526 KTN1Q86UP2 1357 aaKnown RBP21.97■■□□□ 1.11
PDCD6-203ENST00000505526 ABCC6O95255 1503 aa21.96■■□□□ 1.11
PDCD6-203ENST00000505526 EIF4G2P78344 907 aaKnown RBP eCLIP21.96■■□□□ 1.112e-7■■■■■ 43.7
PDCD6-203ENST00000505526 ACSBG1Q96GR2 724 aa21.96■■□□□ 1.11
PDCD6-203ENST00000505526 SGIP1Q9BQI5 828 aa21.96■■□□□ 1.11
PDCD6-203ENST00000505526 NHSQ6T4R5 1651 aa21.95■■□□□ 1.1
PDCD6-203ENST00000505526 HSPA5P11021 654 aaKnown RBP21.93■■□□□ 1.1
PDCD6-203ENST00000505526 NLRP2Q9NX02 1062 aa21.93■■□□□ 1.1
PDCD6-203ENST00000505526 ERBB3P21860 1342 aa21.92■■□□□ 1.1
PDCD6-203ENST00000505526 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.91■■□□□ 1.1
PDCD6-203ENST00000505526 ARXQ96QS3 562 aa21.91■■□□□ 1.1
PDCD6-203ENST00000505526 IL2RBP14784 551 aa21.9■■□□□ 1.1
PDCD6-203ENST00000505526 USP31Q70CQ4 1352 aa21.9■■□□□ 1.1
PDCD6-203ENST00000505526 ST20-MTHFSA0A0A6YYL1 179 aa21.9■■□□□ 1.1
PDCD6-203ENST00000505526 MON2Q7Z3U7 1717 aa21.9■■□□□ 1.1
PDCD6-203ENST00000505526 PAPPAQ13219 1627 aa21.89■■□□□ 1.1
PDCD6-203ENST00000505526 NME9Q86XW9 330 aa21.88■■□□□ 1.09
PDCD6-203ENST00000505526 UTRNP46939 3433 aa21.87■■□□□ 1.09
PDCD6-203ENST00000505526 BTAF1O14981 1849 aa21.86■■□□□ 1.09
PDCD6-203ENST00000505526 ZNF827Q17R98 1081 aa21.86■■□□□ 1.09
PDCD6-203ENST00000505526 ANKRD24Q8TF21 1146 aa21.86■■□□□ 1.09
PDCD6-203ENST00000505526 USP54Q70EL1 1684 aa21.86■■□□□ 1.09
PDCD6-203ENST00000505526 MAP3K5Q99683 1374 aa21.86■■□□□ 1.09
PDCD6-203ENST00000505526 LRRC4BQ9NT99 713 aa21.85■■□□□ 1.09
PDCD6-203ENST00000505526 CHD4Q14839 1912 aa21.85■■□□□ 1.09
PDCD6-203ENST00000505526 LTN1O94822 1766 aa21.84■■□□□ 1.09
PDCD6-203ENST00000505526 SBNO2Q9Y2G9 1366 aa21.84■■□□□ 1.09
PDCD6-203ENST00000505526 CD163L1Q9NR16 1453 aa21.83■■□□□ 1.09
PDCD6-203ENST00000505526 TMC1Q8TDI8 760 aa21.82■■□□□ 1.08
PDCD6-203ENST00000505526 C1QTNF8P60827 252 aa21.81■■□□□ 1.08
PDCD6-203ENST00000505526 GPR162Q16538 588 aa21.81■■□□□ 1.08
PDCD6-203ENST00000505526 HDGFL2Q7Z4V5 671 aaPredicted RBP21.81■■□□□ 1.08
PDCD6-203ENST00000505526 AKT1S1Q96B36 256 aa21.81■■□□□ 1.08
PDCD6-203ENST00000505526 TESK2Q96S53 571 aa21.81■■□□□ 1.08
PDCD6-203ENST00000505526 SENP3-EIF4A1A0A087X0R7 540 aa21.8■■□□□ 1.08
PDCD6-203ENST00000505526 SLC27A3Q5K4L6 730 aa21.79■■□□□ 1.08
PDCD6-203ENST00000505526 SLC16A10Q8TF71 515 aa21.79■■□□□ 1.08
PDCD6-203ENST00000505526 DDX54Q8TDD1 881 aaKnown RBP21.78■■□□□ 1.08
PDCD6-203ENST00000505526 SLC12A5Q9H2X9 1139 aa21.78■■□□□ 1.08
PDCD6-203ENST00000505526 EDC4Q6P2E9 1401 aaKnown RBP21.78■■□□□ 1.08
PDCD6-203ENST00000505526 KAT6BQ8WYB5 2073 aa21.78■■□□□ 1.08
PDCD6-203ENST00000505526 POLD1P28340 1107 aa21.77■■□□□ 1.08
PDCD6-203ENST00000505526 KLHL34Q8N239 644 aa21.77■■□□□ 1.08
PDCD6-203ENST00000505526 IP6K1Q92551 441 aa21.76■■□□□ 1.07
PDCD6-203ENST00000505526 PNPLA7Q6ZV29 1317 aa21.75■■□□□ 1.07
PDCD6-203ENST00000505526 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
PDCD6-203ENST00000505526 QSER1Q2KHR3 1735 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms