RNA–Protein interactions for RNA: ENST00000505417.1

SNRPCP13-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 13, humanhuman

BASIC

Gene SNRPCP13, Length 190 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP13-201ENST00000505417 CHRNA2Q15822 529 aa13.97□□□□□ -0.17
SNRPCP13-201ENST00000505417 VPS72Q15906 364 aa13.97□□□□□ -0.17
SNRPCP13-201ENST00000505417 MORC1Q86VD1 984 aa13.97□□□□□ -0.17
SNRPCP13-201ENST00000505417 GJD4Q96KN9 370 aaPredicted RBP13.97□□□□□ -0.17
SNRPCP13-201ENST00000505417 GLI3P10071 1580 aa13.96□□□□□ -0.17
SNRPCP13-201ENST00000505417 MAP3K19Q56UN5 1328 aa13.96□□□□□ -0.17
SNRPCP13-201ENST00000505417 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
SNRPCP13-201ENST00000505417 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
SNRPCP13-201ENST00000505417 COL14A1Q05707 1796 aaKnown RBP13.96□□□□□ -0.18
SNRPCP13-201ENST00000505417 RTL1A6NKG5 1358 aa13.96□□□□□ -0.18
SNRPCP13-201ENST00000505417 BRWD3Q6RI45 1802 aa13.95□□□□□ -0.18
SNRPCP13-201ENST00000505417 SOX12O15370 315 aa13.95□□□□□ -0.18
SNRPCP13-201ENST00000505417 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
SNRPCP13-201ENST00000505417 ONECUT3O60422 494 aaPredicted RBP13.94□□□□□ -0.18
SNRPCP13-201ENST00000505417 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
SNRPCP13-201ENST00000505417 FBLN1P23142 703 aa13.93□□□□□ -0.18
SNRPCP13-201ENST00000505417 HOXC9P31274 260 aa13.93□□□□□ -0.18
SNRPCP13-201ENST00000505417 AMPHP49418 695 aa13.93□□□□□ -0.18
SNRPCP13-201ENST00000505417 EVA1CP58658 441 aa13.93□□□□□ -0.18
SNRPCP13-201ENST00000505417 CC2D1BQ5T0F9 858 aaKnown RBP13.93□□□□□ -0.18
SNRPCP13-201ENST00000505417 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
SNRPCP13-201ENST00000505417 LMO7Q8WWI1 1683 aa13.92□□□□□ -0.18
SNRPCP13-201ENST00000505417 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
SNRPCP13-201ENST00000505417 FLT4P35916 1363 aa13.92□□□□□ -0.18
SNRPCP13-201ENST00000505417 COL5A2P05997 1499 aaPredicted RBP13.92□□□□□ -0.18
SNRPCP13-201ENST00000505417 ERBB3P21860 1342 aa13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 SPATA31A5Q5VU36 1347 aa13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 SPATA31A7Q8IWB4 1347 aa13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 WDR17Q8IZU2 1322 aa13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 SMG6Q86US8 1419 aaKnown RBP13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 THRAP3Q9Y2W1 955 aaKnown RBP13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 KIF20BQ96Q89 1820 aa13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 INSRP06213 1382 aa13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 COL18A1P39060 1754 aa13.91□□□□□ -0.18
SNRPCP13-201ENST00000505417 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.9□□□□□ -0.18
SNRPCP13-201ENST00000505417 YY1P25490 414 aa13.9□□□□□ -0.18
SNRPCP13-201ENST00000505417 RALBP1Q15311 655 aa13.9□□□□□ -0.18
SNRPCP13-201ENST00000505417 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
SNRPCP13-201ENST00000505417 LARP1Q6PKG0 1096 aaKnown RBP13.9□□□□□ -0.18
SNRPCP13-201ENST00000505417 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
SNRPCP13-201ENST00000505417 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
SNRPCP13-201ENST00000505417 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.19
SNRPCP13-201ENST00000505417 PARD3Q8TEW0 1356 aa13.89□□□□□ -0.19
SNRPCP13-201ENST00000505417 CARD10Q9BWT7 1032 aa13.89□□□□□ -0.19
SNRPCP13-201ENST00000505417 CRB1P82279 1406 aa13.89□□□□□ -0.19
SNRPCP13-201ENST00000505417 ANKRD26Q9UPS8 1709 aa13.88□□□□□ -0.19
SNRPCP13-201ENST00000505417 ZBTB7CA1YPR0 619 aa13.88□□□□□ -0.19
SNRPCP13-201ENST00000505417 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
SNRPCP13-201ENST00000505417 TCP11L2Q8N4U5 519 aa13.88□□□□□ -0.19
SNRPCP13-201ENST00000505417 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
SNRPCP13-201ENST00000505417 STRN4Q9NRL3 753 aa13.88□□□□□ -0.19
SNRPCP13-201ENST00000505417 MTHFSP49914 203 aa13.87□□□□□ -0.19
SNRPCP13-201ENST00000505417 SF3B2Q13435 895 aaKnown RBP13.87□□□□□ -0.19
SNRPCP13-201ENST00000505417 TOM1L2Q6ZVM7 507 aa13.87□□□□□ -0.19
SNRPCP13-201ENST00000505417 PLCH1Q4KWH8 1693 aa13.87□□□□□ -0.19
SNRPCP13-201ENST00000505417 NRAPQ86VF7 1730 aa13.87□□□□□ -0.19
SNRPCP13-201ENST00000505417 CSB-PGBD3P0DP91 1061 aa13.86□□□□□ -0.19
SNRPCP13-201ENST00000505417 PPP2R1AP30153 589 aa13.86□□□□□ -0.19
SNRPCP13-201ENST00000505417 CDCA7Q9BWT1 371 aaPredicted RBP13.86□□□□□ -0.19
SNRPCP13-201ENST00000505417 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
SNRPCP13-201ENST00000505417 SEPT12Q8IYM1 358 aa13.85□□□□□ -0.19
SNRPCP13-201ENST00000505417 CCDC9Q9Y3X0 531 aaKnown RBP13.85□□□□□ -0.19
SNRPCP13-201ENST00000505417 R3HDM1Q15032 1099 aaKnown RBP13.84□□□□□ -0.19
SNRPCP13-201ENST00000505417 EIF4A2Q14240 407 aaKnown RBP13.83□□□□□ -0.2
SNRPCP13-201ENST00000505417 NBPF6Q5VWK0 638 aa13.83□□□□□ -0.2
SNRPCP13-201ENST00000505417 NBPF4Q96M43 638 aa13.83□□□□□ -0.2
SNRPCP13-201ENST00000505417 PRKRIP1Q9H875 184 aaPredicted RBP13.83□□□□□ -0.2
SNRPCP13-201ENST00000505417 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.2
SNRPCP13-201ENST00000505417 LTN1O94822 1766 aa13.83□□□□□ -0.2
SNRPCP13-201ENST00000505417 IL13P35225 146 aa13.82□□□□□ -0.2
SNRPCP13-201ENST00000505417 IFFO2Q5TF58 517 aa13.82□□□□□ -0.2
SNRPCP13-201ENST00000505417 LTV1Q96GA3 475 aaPredicted RBP13.82□□□□□ -0.2
SNRPCP13-201ENST00000505417 PLEKHG2Q9H7P9 1386 aa13.82□□□□□ -0.2
SNRPCP13-201ENST00000505417 NCAPD2Q15021 1401 aa13.81□□□□□ -0.2
SNRPCP13-201ENST00000505417 PEAK1Q9H792 1746 aa13.81□□□□□ -0.2
SNRPCP13-201ENST00000505417 BAG6P46379 1132 aa13.81□□□□□ -0.2
SNRPCP13-201ENST00000505417 EN1Q05925 392 aaPredicted RBP13.81□□□□□ -0.2
SNRPCP13-201ENST00000505417 FAM98CQ17RN3 349 aaKnown RBP13.81□□□□□ -0.2
SNRPCP13-201ENST00000505417 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
SNRPCP13-201ENST00000505417 DIAPH1O60610 1272 aaKnown RBP13.8□□□□□ -0.2
SNRPCP13-201ENST00000505417 KRT27Q7Z3Y8 459 aa13.8□□□□□ -0.2
SNRPCP13-201ENST00000505417 CFAP53Q96M91 514 aa13.8□□□□□ -0.2
SNRPCP13-201ENST00000505417 EYA1Q99502 592 aa13.8□□□□□ -0.2
SNRPCP13-201ENST00000505417 DISP2A7MBM2 1401 aa13.8□□□□□ -0.2
SNRPCP13-201ENST00000505417 IL2RBP14784 551 aa13.79□□□□□ -0.2
SNRPCP13-201ENST00000505417 IGSF1Q8N6C5 1336 aa13.79□□□□□ -0.2
SNRPCP13-201ENST00000505417 MYBBP1AQ9BQG0 1328 aaKnown RBP13.79□□□□□ -0.2
SNRPCP13-201ENST00000505417 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
SNRPCP13-201ENST00000505417 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
SNRPCP13-201ENST00000505417 KDRP35968 1356 aa13.77□□□□□ -0.21
SNRPCP13-201ENST00000505417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNRPCP13-201ENST00000505417 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
SNRPCP13-201ENST00000505417 COL3A1P02461 1466 aaPredicted RBP13.76□□□□□ -0.21
SNRPCP13-201ENST00000505417 EXOC5O00471 708 aa13.76□□□□□ -0.21
SNRPCP13-201ENST00000505417 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
SNRPCP13-201ENST00000505417 ANP32CO43423 234 aa13.75□□□□□ -0.21
SNRPCP13-201ENST00000505417 DDB1Q16531 1140 aa13.75□□□□□ -0.21
SNRPCP13-201ENST00000505417 RAPGEF4Q8WZA2 1011 aa13.75□□□□□ -0.21
SNRPCP13-201ENST00000505417 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
SNRPCP13-201ENST00000505417 RGPD5Q99666 1765 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms