RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 ABCC6O95255 1503 aa13.11□□□□□ -0.31
SIL1-206ENST00000505353 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
SIL1-206ENST00000505353 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
SIL1-206ENST00000505353 THSD7AQ9UPZ6 1657 aa13.1□□□□□ -0.31
SIL1-206ENST00000505353 SOX12O15370 315 aa13.1□□□□□ -0.31
SIL1-206ENST00000505353 EVA1CP58658 441 aa13.1□□□□□ -0.31
SIL1-206ENST00000505353 FAM98CQ17RN3 349 aaKnown RBP13.1□□□□□ -0.31
SIL1-206ENST00000505353 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
SIL1-206ENST00000505353 EP400Q96L91 3159 aa13.1□□□□□ -0.31
SIL1-206ENST00000505353 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
SIL1-206ENST00000505353 COG3Q96JB2 828 aa13.09□□□□□ -0.31
SIL1-206ENST00000505353 MAP3K19Q56UN5 1328 aa13.09□□□□□ -0.31
SIL1-206ENST00000505353 WDR17Q8IZU2 1322 aa13.09□□□□□ -0.31
SIL1-206ENST00000505353 CRB1P82279 1406 aa13.08□□□□□ -0.32
SIL1-206ENST00000505353 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.32
SIL1-206ENST00000505353 IP6K1Q92551 441 aa13.08□□□□□ -0.32
SIL1-206ENST00000505353 CCDC9Q9Y3X0 531 aaKnown RBP13.08□□□□□ -0.32
SIL1-206ENST00000505353 WASHC2AQ641Q2 1341 aa13.08□□□□□ -0.32
SIL1-206ENST00000505353 LTN1O94822 1766 aa13.07□□□□□ -0.32
SIL1-206ENST00000505353 THRAP3Q9Y2W1 955 aaKnown RBP13.07□□□□□ -0.32
SIL1-206ENST00000505353 ERBB3P21860 1342 aa13.07□□□□□ -0.32
SIL1-206ENST00000505353 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
SIL1-206ENST00000505353 KIF20BQ96Q89 1820 aa13.06□□□□□ -0.32
SIL1-206ENST00000505353 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
SIL1-206ENST00000505353 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
SIL1-206ENST00000505353 CARD10Q9BWT7 1032 aa13.06□□□□□ -0.32
SIL1-206ENST00000505353 HOXC9P31274 260 aa13.05□□□□□ -0.32
SIL1-206ENST00000505353 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
SIL1-206ENST00000505353 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
SIL1-206ENST00000505353 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
SIL1-206ENST00000505353 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
SIL1-206ENST00000505353 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
SIL1-206ENST00000505353 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
SIL1-206ENST00000505353 DISP2A7MBM2 1401 aa13.04□□□□□ -0.32
SIL1-206ENST00000505353 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
SIL1-206ENST00000505353 PEAK1Q9H792 1746 aa13.02□□□□□ -0.32
SIL1-206ENST00000505353 ANKRD24Q8TF21 1146 aa13.02□□□□□ -0.33
SIL1-206ENST00000505353 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
SIL1-206ENST00000505353 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.33
SIL1-206ENST00000505353 EMILIN1Q9Y6C2 1016 aa13.01□□□□□ -0.33
SIL1-206ENST00000505353 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
SIL1-206ENST00000505353 PARP4Q9UKK3 1724 aaKnown RBP13.01□□□□□ -0.33
SIL1-206ENST00000505353 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
SIL1-206ENST00000505353 INSRP06213 1382 aa13□□□□□ -0.33
SIL1-206ENST00000505353 AMPHP49418 695 aa13□□□□□ -0.33
SIL1-206ENST00000505353 HSP90AB2PQ58FF8 381 aa13□□□□□ -0.33
SIL1-206ENST00000505353 FAM182BQ5T319 152 aa13□□□□□ -0.33
SIL1-206ENST00000505353 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
SIL1-206ENST00000505353 NSD2O96028 1365 aa12.99□□□□□ -0.33
SIL1-206ENST00000505353 CCDC125Q86Z20 511 aa12.99□□□□□ -0.33
SIL1-206ENST00000505353 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
SIL1-206ENST00000505353 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
SIL1-206ENST00000505353 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
SIL1-206ENST00000505353 NBPF6Q5VWK0 638 aa12.98□□□□□ -0.33
SIL1-206ENST00000505353 NBPF4Q96M43 638 aa12.98□□□□□ -0.33
SIL1-206ENST00000505353 CDCA7Q9BWT1 371 aaPredicted RBP12.98□□□□□ -0.33
SIL1-206ENST00000505353 NLRP2Q9NX02 1062 aa12.98□□□□□ -0.33
SIL1-206ENST00000505353 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
SIL1-206ENST00000505353 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
SIL1-206ENST00000505353 FLT4P35916 1363 aa12.97□□□□□ -0.33
SIL1-206ENST00000505353 FAM208AQ9UK61 1670 aaKnown RBP12.97□□□□□ -0.33
SIL1-206ENST00000505353 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
SIL1-206ENST00000505353 LRRC37A3O60309 1634 aa12.97□□□□□ -0.33
SIL1-206ENST00000505353 BCL9O00512 1426 aa12.96□□□□□ -0.33
SIL1-206ENST00000505353 NCAPD2Q15021 1401 aa12.96□□□□□ -0.33
SIL1-206ENST00000505353 A0A0G2JS52 829 aa12.96□□□□□ -0.33
SIL1-206ENST00000505353 MYT1Q01538 1121 aa12.96□□□□□ -0.33
SIL1-206ENST00000505353 FAM196AQ6ZSG2 479 aa12.96□□□□□ -0.33
SIL1-206ENST00000505353 LTV1Q96GA3 475 aaPredicted RBP12.96□□□□□ -0.33
SIL1-206ENST00000505353 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.34
SIL1-206ENST00000505353 PDE3BQ13370 1112 aa12.95□□□□□ -0.34
SIL1-206ENST00000505353 DDB1Q16531 1140 aa12.95□□□□□ -0.34
SIL1-206ENST00000505353 IL2RBP14784 551 aa12.94□□□□□ -0.34
SIL1-206ENST00000505353 TNNT2P45379 298 aaPredicted RBP12.94□□□□□ -0.34
SIL1-206ENST00000505353 EXOC5O00471 708 aa12.93□□□□□ -0.34
SIL1-206ENST00000505353 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
SIL1-206ENST00000505353 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
SIL1-206ENST00000505353 TNS2Q63HR2 1409 aa12.92□□□□□ -0.34
SIL1-206ENST00000505353 DEFB132Q7Z7B7 95 aa12.92□□□□□ -0.34
SIL1-206ENST00000505353 EYA1Q99502 592 aa12.92□□□□□ -0.34
SIL1-206ENST00000505353 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
SIL1-206ENST00000505353 PPM1GO15355 546 aaPredicted RBP12.91□□□□□ -0.34
SIL1-206ENST00000505353 TRIM37O94972 964 aa12.91□□□□□ -0.34
SIL1-206ENST00000505353 PTF1AQ7RTS3 328 aa12.91□□□□□ -0.34
SIL1-206ENST00000505353 MEGF6O75095 1541 aa12.91□□□□□ -0.34
SIL1-206ENST00000505353 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
SIL1-206ENST00000505353 ZEB1P37275 1124 aaPredicted RBP12.9□□□□□ -0.34
SIL1-206ENST00000505353 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.34
SIL1-206ENST00000505353 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
SIL1-206ENST00000505353 OVOS2A0A0G2JMS6 1433 aa12.89□□□□□ -0.35
SIL1-206ENST00000505353 SHANK3Q9BYB0 1731 aa12.89□□□□□ -0.35
SIL1-206ENST00000505353 MTHFSP49914 203 aa12.89□□□□□ -0.35
SIL1-206ENST00000505353 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
SIL1-206ENST00000505353 IL13P35225 146 aa12.88□□□□□ -0.35
SIL1-206ENST00000505353 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
SIL1-206ENST00000505353 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
SIL1-206ENST00000505353 ZCRB1Q8TBF4 217 aaKnown RBP12.87□□□□□ -0.35
SIL1-206ENST00000505353 KCNQ2O43526 872 aa12.86□□□□□ -0.35
SIL1-206ENST00000505353 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
SIL1-206ENST00000505353 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms