RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
DDX41-204ENST00000504807 PROM2Q8N271 834 aa18.83■□□□□ 0.6
DDX41-204ENST00000504807 MTFR1LQ9H019 292 aa18.82■□□□□ 0.6
DDX41-204ENST00000504807 STK32BQ9NY57 414 aa18.82■□□□□ 0.6
DDX41-204ENST00000504807 SLIT3O75094 1523 aa18.82■□□□□ 0.6
DDX41-204ENST00000504807 OVOS2A0A0G2JMS6 1433 aa18.82■□□□□ 0.6
DDX41-204ENST00000504807 OVOS2A0A0J9YW53 1432 aa18.82■□□□□ 0.6
DDX41-204ENST00000504807 OVOS2Q6IE36 1432 aa18.82■□□□□ 0.6
DDX41-204ENST00000504807 AKAP12Q02952 1782 aa18.81■□□□□ 0.6
DDX41-204ENST00000504807 EVC2Q86UK5 1308 aa18.81■□□□□ 0.6
DDX41-204ENST00000504807 C11orf95C9JLR9 678 aaPredicted RBP18.81■□□□□ 0.6
DDX41-204ENST00000504807 ARXQ96QS3 562 aa18.81■□□□□ 0.6
DDX41-204ENST00000504807 CPDO75976 1380 aa18.81■□□□□ 0.6
DDX41-204ENST00000504807 GCP02774 474 aa18.8■□□□□ 0.6
DDX41-204ENST00000504807 TRIM26Q12899 539 aaPredicted RBP18.8■□□□□ 0.6
DDX41-204ENST00000504807 SGIP1Q9BQI5 828 aa18.8■□□□□ 0.6
DDX41-204ENST00000504807 CD163L1Q9NR16 1453 aa18.79■□□□□ 0.6
DDX41-204ENST00000504807 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
DDX41-204ENST00000504807 THRAP3Q9Y2W1 955 aaKnown RBP18.79■□□□□ 0.6
DDX41-204ENST00000504807 CPSF1Q10570 1443 aaKnown RBP18.79■□□□□ 0.6
DDX41-204ENST00000504807 GOLGB1Q14789 3259 aaKnown RBP18.78■□□□□ 0.6
DDX41-204ENST00000504807 SLC15A2Q16348 729 aa18.78■□□□□ 0.6
DDX41-204ENST00000504807 TONSLQ96HA7 1378 aa18.78■□□□□ 0.6
DDX41-204ENST00000504807 CARD11Q9BXL7 1154 aa18.77■□□□□ 0.6
DDX41-204ENST00000504807 COL18A1P39060 1754 aa18.77■□□□□ 0.6
DDX41-204ENST00000504807 COL5A2P05997 1499 aaPredicted RBP18.77■□□□□ 0.59
DDX41-204ENST00000504807 RGPD3A6NKT7 1758 aaPredicted RBP18.76■□□□□ 0.59
DDX41-204ENST00000504807 RGPD4Q7Z3J3 1758 aa18.76■□□□□ 0.59
DDX41-204ENST00000504807 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
DDX41-204ENST00000504807 SBNO2Q9Y2G9 1366 aa18.76■□□□□ 0.59
DDX41-204ENST00000504807 TTC21BQ7Z4L5 1316 aa18.75■□□□□ 0.59
DDX41-204ENST00000504807 NLRP6P59044 892 aa18.75■□□□□ 0.59
DDX41-204ENST00000504807 TXNRD1Q16881 649 aa18.75■□□□□ 0.59
DDX41-204ENST00000504807 KLHL34Q8N239 644 aa18.75■□□□□ 0.59
DDX41-204ENST00000504807 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
DDX41-204ENST00000504807 MON2Q7Z3U7 1717 aa18.74■□□□□ 0.59
DDX41-204ENST00000504807 MAP3K5Q99683 1374 aa18.73■□□□□ 0.59
DDX41-204ENST00000504807 DDB1Q16531 1140 aa18.73■□□□□ 0.59
DDX41-204ENST00000504807 AXIN2Q9Y2T1 843 aa18.73■□□□□ 0.59
DDX41-204ENST00000504807 PEAK1Q9H792 1746 aa18.73■□□□□ 0.59
DDX41-204ENST00000504807 NFAT5O94916 1531 aa18.73■□□□□ 0.59
DDX41-204ENST00000504807 PARP4Q9UKK3 1724 aaKnown RBP18.72■□□□□ 0.59
DDX41-204ENST00000504807 SHANK3Q9BYB0 1731 aa18.71■□□□□ 0.59
DDX41-204ENST00000504807 ZBTB7CA1YPR0 619 aa18.71■□□□□ 0.59
DDX41-204ENST00000504807 TESK2Q96S53 571 aa18.71■□□□□ 0.59
DDX41-204ENST00000504807 AATKQ6ZMQ8 1374 aa18.7■□□□□ 0.58
DDX41-204ENST00000504807 KTN1Q86UP2 1357 aaKnown RBP18.7■□□□□ 0.58
DDX41-204ENST00000504807 HSPA6P17066 643 aa18.69■□□□□ 0.58
DDX41-204ENST00000504807 MARCH10Q8NA82 808 aaPredicted RBP18.69■□□□□ 0.58
DDX41-204ENST00000504807 SLC12A5Q9H2X9 1139 aa18.69■□□□□ 0.58
DDX41-204ENST00000504807 RGPD5Q99666 1765 aa18.68■□□□□ 0.58
DDX41-204ENST00000504807 SOX12O15370 315 aa18.68■□□□□ 0.58
DDX41-204ENST00000504807 CRB1P82279 1406 aa18.67■□□□□ 0.58
DDX41-204ENST00000504807 USP54Q70EL1 1684 aa18.67■□□□□ 0.58
DDX41-204ENST00000504807 ARHGEF25Q86VW2 580 aa18.67■□□□□ 0.58
DDX41-204ENST00000504807 NME9Q86XW9 330 aa18.67■□□□□ 0.58
DDX41-204ENST00000504807 ZNF692Q9BU19 519 aaPredicted RBP18.67■□□□□ 0.58
DDX41-204ENST00000504807 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
DDX41-204ENST00000504807 SBF2Q86WG5 1849 aa18.66■□□□□ 0.58
DDX41-204ENST00000504807 ST20-MTHFSA0A0A6YYL1 179 aa18.66■□□□□ 0.58
DDX41-204ENST00000504807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
DDX41-204ENST00000504807 A0A1W2PP64 1363 aa18.66■□□□□ 0.58
DDX41-204ENST00000504807 TTC21AQ8NDW8 1320 aa18.65■□□□□ 0.58
DDX41-204ENST00000504807 WNK3Q9BYP7 1800 aa18.65■□□□□ 0.58
DDX41-204ENST00000504807 USP31Q70CQ4 1352 aa18.64■□□□□ 0.57
DDX41-204ENST00000504807 ATP10DQ9P241 1426 aa18.64■□□□□ 0.57
DDX41-204ENST00000504807 TOM1L2Q6ZVM7 507 aa18.63■□□□□ 0.57
DDX41-204ENST00000504807 NLGN2Q8NFZ4 835 aa18.63■□□□□ 0.57
DDX41-204ENST00000504807 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
DDX41-204ENST00000504807 GPBP1L1Q9HC44 474 aaPredicted RBP18.62■□□□□ 0.57
DDX41-204ENST00000504807 WDR17Q8IZU2 1322 aa18.61■□□□□ 0.57
DDX41-204ENST00000504807 CAPN15O75808 1086 aa18.6■□□□□ 0.57
DDX41-204ENST00000504807 YBX3P16989 372 aaKnown RBP eCLIP18.6■□□□□ 0.57
DDX41-204ENST00000504807 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
DDX41-204ENST00000504807 ZNF526Q8TF50 670 aaPredicted RBP18.6■□□□□ 0.57
DDX41-204ENST00000504807 BCL9O00512 1426 aa18.59■□□□□ 0.57
DDX41-204ENST00000504807 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
DDX41-204ENST00000504807 POLD1P28340 1107 aa18.59■□□□□ 0.57
DDX41-204ENST00000504807 GRIN3BO60391 1043 aa18.58■□□□□ 0.56
DDX41-204ENST00000504807 KCNH5Q8NCM2 988 aa18.58■□□□□ 0.56
DDX41-204ENST00000504807 LTN1O94822 1766 aa18.58■□□□□ 0.56
DDX41-204ENST00000504807 USP47Q96K76 1375 aa18.57■□□□□ 0.56
DDX41-204ENST00000504807 ABCC6O95255 1503 aa18.56■□□□□ 0.56
DDX41-204ENST00000504807 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
DDX41-204ENST00000504807 FBLN1P23142 703 aa18.55■□□□□ 0.56
DDX41-204ENST00000504807 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
DDX41-204ENST00000504807 ACSBG1Q96GR2 724 aa18.55■□□□□ 0.56
DDX41-204ENST00000504807 CDCA7Q9BWT1 371 aaPredicted RBP18.54■□□□□ 0.56
DDX41-204ENST00000504807 CARD10Q9BWT7 1032 aa18.53■□□□□ 0.56
DDX41-204ENST00000504807 EXOC5O00471 708 aa18.52■□□□□ 0.56
DDX41-204ENST00000504807 PCGF6Q9BYE7 350 aa18.52■□□□□ 0.56
DDX41-204ENST00000504807 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
DDX41-204ENST00000504807 ERBB3P21860 1342 aa18.51■□□□□ 0.55
DDX41-204ENST00000504807 CSB-PGBD3P0DP91 1061 aa18.51■□□□□ 0.55
DDX41-204ENST00000504807 SLC16A10Q8TF71 515 aa18.51■□□□□ 0.55
DDX41-204ENST00000504807 LRRC4BQ9NT99 713 aa18.51■□□□□ 0.55
DDX41-204ENST00000504807 TERF2IPQ9NYB0 399 aa18.51■□□□□ 0.55
DDX41-204ENST00000504807 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
DDX41-204ENST00000504807 COL13A1Q5TAT6 717 aaPredicted RBP18.48■□□□□ 0.55
DDX41-204ENST00000504807 ANKRD24Q8TF21 1146 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms