RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 CDV3Q9UKY7 258 aaKnown RBP10.58□□□□□ -0.72
TRAPPC13-206ENST00000504751 MAP4K5Q9Y4K4 846 aa10.58□□□□□ -0.72
TRAPPC13-206ENST00000504751 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC13-206ENST00000504751 GIGYF1O75420 1035 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC13-206ENST00000504751 SKIP12755 728 aa10.57□□□□□ -0.72
TRAPPC13-206ENST00000504751 RFX1P22670 979 aa10.57□□□□□ -0.72
TRAPPC13-206ENST00000504751 SPRYD7Q5W111 196 aa10.57□□□□□ -0.72
TRAPPC13-206ENST00000504751 USP17L3A6NCW0 530 aa10.56□□□□□ -0.72
TRAPPC13-206ENST00000504751 USP17L4A6NCW7 530 aa10.56□□□□□ -0.72
TRAPPC13-206ENST00000504751 WNT7AO00755 349 aa10.56□□□□□ -0.72
TRAPPC13-206ENST00000504751 PPP1R15AO75807 674 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC13-206ENST00000504751 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
TRAPPC13-206ENST00000504751 USP17L1Q7RTZ2 530 aa10.56□□□□□ -0.72
TRAPPC13-206ENST00000504751 PLEKHM2Q8IWE5 1019 aa10.56□□□□□ -0.72
TRAPPC13-206ENST00000504751 PLPP7Q8NBV4 271 aa10.55□□□□□ -0.72
TRAPPC13-206ENST00000504751 CCDC85AQ96PX6 553 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC13-206ENST00000504751 TLL2Q9Y6L7 1015 aa10.55□□□□□ -0.72
TRAPPC13-206ENST00000504751 SIAH2O43255 324 aa10.54□□□□□ -0.72
TRAPPC13-206ENST00000504751 TRAF7Q6Q0C0 670 aa10.54□□□□□ -0.72
TRAPPC13-206ENST00000504751 CDK15Q96Q40 435 aa10.54□□□□□ -0.72
TRAPPC13-206ENST00000504751 KCTD15Q96SI1 283 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC13-206ENST00000504751 TSGA10IPQ3SY00 556 aa10.53□□□□□ -0.72
TRAPPC13-206ENST00000504751 SEPT12Q8IYM1 358 aa10.53□□□□□ -0.72
TRAPPC13-206ENST00000504751 DEPDC4Q8N2C3 294 aa10.53□□□□□ -0.72
TRAPPC13-206ENST00000504751 MPNDQ8N594 471 aa10.53□□□□□ -0.72
TRAPPC13-206ENST00000504751 MRGPRX2Q96LB1 330 aa10.53□□□□□ -0.72
TRAPPC13-206ENST00000504751 PRKD2Q9BZL6 878 aa10.53□□□□□ -0.72
TRAPPC13-206ENST00000504751 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC13-206ENST00000504751 NCOA4Q13772 614 aa10.52□□□□□ -0.73
TRAPPC13-206ENST00000504751 MAP7D1Q3KQU3 841 aa10.52□□□□□ -0.73
TRAPPC13-206ENST00000504751 KANK4Q5T7N3 995 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC13-206ENST00000504751 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.73
TRAPPC13-206ENST00000504751 VASH1Q7L8A9 365 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC13-206ENST00000504751 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.73
TRAPPC13-206ENST00000504751 INTS6LQ5JSJ4 861 aaKnown RBP10.51□□□□□ -0.73
TRAPPC13-206ENST00000504751 RNF20Q5VTR2 975 aa10.51□□□□□ -0.73
TRAPPC13-206ENST00000504751 PKD2L1Q9P0L9 805 aa10.51□□□□□ -0.73
TRAPPC13-206ENST00000504751 DOLKQ9UPQ8 538 aa10.51□□□□□ -0.73
TRAPPC13-206ENST00000504751 FSHRP23945 695 aa10.5□□□□□ -0.73
TRAPPC13-206ENST00000504751 GRM5P41594 1212 aa10.5□□□□□ -0.73
TRAPPC13-206ENST00000504751 ARID5BQ14865 1188 aa10.49□□□□□ -0.73
TRAPPC13-206ENST00000504751 LZTS3O60299 673 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC13-206ENST00000504751 ADH1CP00326 375 aa10.48□□□□□ -0.73
TRAPPC13-206ENST00000504751 CCDC125Q86Z20 511 aa10.48□□□□□ -0.73
TRAPPC13-206ENST00000504751 RETREG2Q8NC44 543 aa10.48□□□□□ -0.73
TRAPPC13-206ENST00000504751 CDCA7Q9BWT1 371 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC13-206ENST00000504751 PCDHB11Q9Y5F2 797 aa10.48□□□□□ -0.73
TRAPPC13-206ENST00000504751 RAB15P59190 212 aa10.47□□□□□ -0.73
TRAPPC13-206ENST00000504751 EML3Q32P44 896 aa10.47□□□□□ -0.73
TRAPPC13-206ENST00000504751 VRTNQ9H8Y1 702 aa10.47□□□□□ -0.73
TRAPPC13-206ENST00000504751 ATG7O95352 703 aa10.46□□□□□ -0.73
TRAPPC13-206ENST00000504751 CDCA8Q53HL2 280 aa10.46□□□□□ -0.73
TRAPPC13-206ENST00000504751 MKRN1Q9UHC7 482 aaKnown RBP10.46□□□□□ -0.73
TRAPPC13-206ENST00000504751 ERVH48-1M5A8F1 160 aa10.45□□□□□ -0.74
TRAPPC13-206ENST00000504751 FOXC1Q12948 553 aa10.45□□□□□ -0.74
TRAPPC13-206ENST00000504751 OXLD1Q5BKU9 147 aa10.45□□□□□ -0.74
TRAPPC13-206ENST00000504751 ATP5J2-PTCD1G3V325 749 aa10.44□□□□□ -0.74
TRAPPC13-206ENST00000504751 NR3C2P08235 984 aa10.44□□□□□ -0.74
TRAPPC13-206ENST00000504751 FAM196BA6NMK8 535 aa10.43□□□□□ -0.74
TRAPPC13-206ENST00000504751 GDF9O60383 454 aa10.43□□□□□ -0.74
TRAPPC13-206ENST00000504751 SCTRP47872 440 aa10.43□□□□□ -0.74
TRAPPC13-206ENST00000504751 CLDN10P78369 228 aa10.43□□□□□ -0.74
TRAPPC13-206ENST00000504751 NR5A1Q13285 461 aa10.43□□□□□ -0.74
TRAPPC13-206ENST00000504751 CRTC2Q53ET0 693 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC13-206ENST00000504751 TRIM67Q6ZTA4 783 aa10.43□□□□□ -0.74
TRAPPC13-206ENST00000504751 ACIN1Q9UKV3 1341 aaKnown RBP10.42□□□□□ -0.74
TRAPPC13-206ENST00000504751 ALDH1A1P00352 501 aa10.42□□□□□ -0.74
TRAPPC13-206ENST00000504751 CCDC116Q8IYX3 515 aa10.42□□□□□ -0.74
TRAPPC13-206ENST00000504751 ZMIZ1Q9ULJ6 1067 aa10.42□□□□□ -0.74
TRAPPC13-206ENST00000504751 NOD1Q9Y239 953 aa10.42□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L15C9J2P7 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L10C9JJH3 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L13C9JLJ4 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L12C9JPN9 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L11C9JVI0 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L21D6R901 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L18D6R9N7 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L22D6RA61 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L17D6RBQ6 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L19D6RCP7 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L20D6RJB6 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 TNFRSF10AO00220 468 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 ERVK-9P63128 1117 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 DHX9Q08211 1270 aaKnown RBP10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 USP17L24Q0WX57 530 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 PTK7Q13308 1070 aa10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 ELOAQ14241 798 aaKnown RBP10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 SNIP1Q8TAD8 396 aaKnown RBP10.41□□□□□ -0.74
TRAPPC13-206ENST00000504751 RASA1P20936 1047 aa10.4□□□□□ -0.74
TRAPPC13-206ENST00000504751 PPP1R26Q5T8A7 1209 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC13-206ENST00000504751 TRIM50Q86XT4 487 aa10.4□□□□□ -0.74
TRAPPC13-206ENST00000504751 OGFOD1Q8N543 542 aa10.4□□□□□ -0.74
TRAPPC13-206ENST00000504751 TMPRSS4Q9NRS4 437 aa10.4□□□□□ -0.74
TRAPPC13-206ENST00000504751 GTF2IP78347 998 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 PRR20EP86478 221 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 PRR20CP86479 221 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 PRR20DP86480 221 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 PRR20BP86481 221 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 PRR20AP86496 221 aa10.39□□□□□ -0.75
TRAPPC13-206ENST00000504751 USP4Q13107 963 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms