RNA–Protein interactions for RNA: ENST00000503972.5

YIPF3-212, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 933 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-212ENST00000503972 IL13P35225 146 aa20.69■□□□□ 0.9
YIPF3-212ENST00000503972 FAM9BQ8IZU0 186 aa20.69■□□□□ 0.9
YIPF3-212ENST00000503972 NUDCQ9Y266 331 aa20.69■□□□□ 0.9
YIPF3-212ENST00000503972 ABCC6O95255 1503 aa20.68■□□□□ 0.9
YIPF3-212ENST00000503972 EIF4A2Q14240 407 aaKnown RBP20.68■□□□□ 0.9
YIPF3-212ENST00000503972 WDR43Q15061 677 aaKnown RBP eCLIP20.68■□□□□ 0.9
YIPF3-212ENST00000503972 BLMP54132 1417 aaPredicted RBP20.68■□□□□ 0.9
YIPF3-212ENST00000503972 CHRNA2Q15822 529 aa20.67■□□□□ 0.9
YIPF3-212ENST00000503972 PRDM11Q9NQV5 511 aa20.67■□□□□ 0.9
YIPF3-212ENST00000503972 AXIN2Q9Y2T1 843 aa20.67■□□□□ 0.9
YIPF3-212ENST00000503972 COL18A1P39060 1754 aa20.67■□□□□ 0.9
YIPF3-212ENST00000503972 SPATA31A6Q5VVP1 1343 aa20.65■□□□□ 0.9
YIPF3-212ENST00000503972 FBXO41Q8TF61 875 aa20.65■□□□□ 0.9
YIPF3-212ENST00000503972 ADAMTS8Q9UP79 889 aa20.65■□□□□ 0.9
YIPF3-212ENST00000503972 FAM83GA6ND36 823 aa20.64■□□□□ 0.89
YIPF3-212ENST00000503972 NUTM2BA6NNL0 878 aaPredicted RBP20.64■□□□□ 0.89
YIPF3-212ENST00000503972 NUTM2EB1AL46 878 aaPredicted RBP20.64■□□□□ 0.89
YIPF3-212ENST00000503972 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
YIPF3-212ENST00000503972 NUTM2AQ8IVF1 878 aaPredicted RBP20.64■□□□□ 0.89
YIPF3-212ENST00000503972 U2AF1L5P0DN76 240 aaPredicted RBP20.63■□□□□ 0.89
YIPF3-212ENST00000503972 U2AF1Q01081 240 aaKnown RBP eCLIP20.63■□□□□ 0.89
YIPF3-212ENST00000503972 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
YIPF3-212ENST00000503972 LMO7Q8WWI1 1683 aa20.63■□□□□ 0.89
YIPF3-212ENST00000503972 ADAMTS2O95450 1211 aa20.61■□□□□ 0.89
YIPF3-212ENST00000503972 ANKRD24Q8TF21 1146 aa20.61■□□□□ 0.89
YIPF3-212ENST00000503972 ERBB3P21860 1342 aa20.6■□□□□ 0.89
YIPF3-212ENST00000503972 COL14A1Q05707 1796 aaKnown RBP20.6■□□□□ 0.89
YIPF3-212ENST00000503972 RGPD5Q99666 1765 aa20.6■□□□□ 0.89
YIPF3-212ENST00000503972 CAMTA1Q9Y6Y1 1673 aa20.6■□□□□ 0.89
YIPF3-212ENST00000503972 RGPD1P0DJD0 1748 aa20.59■□□□□ 0.89
YIPF3-212ENST00000503972 EYA1Q99502 592 aa20.59■□□□□ 0.89
YIPF3-212ENST00000503972 IGSF1Q8N6C5 1336 aa20.58■□□□□ 0.89
YIPF3-212ENST00000503972 LRP6O75581 1613 aa20.57■□□□□ 0.88
YIPF3-212ENST00000503972 COL5A2P05997 1499 aaPredicted RBP20.56■□□□□ 0.88
YIPF3-212ENST00000503972 FCHSD2O94868 740 aa20.56■□□□□ 0.88
YIPF3-212ENST00000503972 NBPF6Q5VWK0 638 aa20.56■□□□□ 0.88
YIPF3-212ENST00000503972 NBPF4Q96M43 638 aa20.56■□□□□ 0.88
YIPF3-212ENST00000503972 BTG4Q9NY30 223 aa20.56■□□□□ 0.88
YIPF3-212ENST00000503972 HMOX1P09601 288 aa20.55■□□□□ 0.88
YIPF3-212ENST00000503972 CSB-PGBD3P0DP91 1061 aa20.55■□□□□ 0.88
YIPF3-212ENST00000503972 SULT6B1Q6IMI4 303 aa20.55■□□□□ 0.88
YIPF3-212ENST00000503972 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
YIPF3-212ENST00000503972 PNNQ9H307 717 aaKnown RBP20.54■□□□□ 0.88
YIPF3-212ENST00000503972 WDR17Q8IZU2 1322 aa20.53■□□□□ 0.88
YIPF3-212ENST00000503972 EVA1CP58658 441 aa20.53■□□□□ 0.88
YIPF3-212ENST00000503972 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
YIPF3-212ENST00000503972 CCDC146Q8IYE0 955 aa20.53■□□□□ 0.88
YIPF3-212ENST00000503972 PLEKHF1Q96S99 279 aa20.53■□□□□ 0.88
YIPF3-212ENST00000503972 KDRP35968 1356 aa20.53■□□□□ 0.88
YIPF3-212ENST00000503972 FAM208AQ9UK61 1670 aaKnown RBP20.53■□□□□ 0.88
YIPF3-212ENST00000503972 NCAPD2Q15021 1401 aa20.53■□□□□ 0.88
YIPF3-212ENST00000503972 PLCH1Q4KWH8 1693 aa20.52■□□□□ 0.88
YIPF3-212ENST00000503972 RUNDC1Q96C34 613 aa20.52■□□□□ 0.88
YIPF3-212ENST00000503972 STRN4Q9NRL3 753 aa20.52■□□□□ 0.88
YIPF3-212ENST00000503972 SLIT2O94813 1529 aa20.52■□□□□ 0.87
YIPF3-212ENST00000503972 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
YIPF3-212ENST00000503972 PRKAR2BP31323 418 aa20.51■□□□□ 0.87
YIPF3-212ENST00000503972 USHBP1Q8N6Y0 703 aa20.51■□□□□ 0.87
YIPF3-212ENST00000503972 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
YIPF3-212ENST00000503972 NLRP2Q9NX02 1062 aa20.51■□□□□ 0.87
YIPF3-212ENST00000503972 C8orf37Q96NL8 207 aa20.5■□□□□ 0.87
YIPF3-212ENST00000503972 MEX3CQ5U5Q3 659 aaKnown RBP20.49■□□□□ 0.87
YIPF3-212ENST00000503972 LARP1Q6PKG0 1096 aaKnown RBP20.49■□□□□ 0.87
YIPF3-212ENST00000503972 TOM1L2Q6ZVM7 507 aa20.49■□□□□ 0.87
YIPF3-212ENST00000503972 NGLY1Q96IV0 654 aa20.49■□□□□ 0.87
YIPF3-212ENST00000503972 NWD2Q9ULI1 1742 aa20.49■□□□□ 0.87
YIPF3-212ENST00000503972 NRAPQ86VF7 1730 aa20.48■□□□□ 0.87
YIPF3-212ENST00000503972 HNRNPUQ00839 825 aaKnown RBP eCLIP20.48■□□□□ 0.87
YIPF3-212ENST00000503972 CARD10Q9BWT7 1032 aa20.48■□□□□ 0.87
YIPF3-212ENST00000503972 MAPK8IP3Q9UPT6 1336 aa20.48■□□□□ 0.87
YIPF3-212ENST00000503972 FNBP4Q8N3X1 1017 aaPredicted RBP20.47■□□□□ 0.87
YIPF3-212ENST00000503972 CRB1P82279 1406 aa20.46■□□□□ 0.87
YIPF3-212ENST00000503972 APAF1O14727 1248 aa20.46■□□□□ 0.87
YIPF3-212ENST00000503972 NEFMP07197 916 aa20.46■□□□□ 0.87
YIPF3-212ENST00000503972 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.86
YIPF3-212ENST00000503972 PHACTR3Q96KR7 559 aa20.45■□□□□ 0.86
YIPF3-212ENST00000503972 BCL9LQ86UU0 1499 aa20.44■□□□□ 0.86
YIPF3-212ENST00000503972 UNC5CLQ8IV45 518 aa20.44■□□□□ 0.86
YIPF3-212ENST00000503972 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
YIPF3-212ENST00000503972 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
YIPF3-212ENST00000503972 RAPGEF4Q8WZA2 1011 aa20.41■□□□□ 0.86
YIPF3-212ENST00000503972 USP21Q9UK80 565 aa20.41■□□□□ 0.86
YIPF3-212ENST00000503972 AFF2P51816 1311 aa20.4■□□□□ 0.86
YIPF3-212ENST00000503972 NFE2L2Q16236 605 aa20.4■□□□□ 0.86
YIPF3-212ENST00000503972 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
YIPF3-212ENST00000503972 NGEFQ8N5V2 710 aa20.4■□□□□ 0.86
YIPF3-212ENST00000503972 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.39■□□□□ 0.86
YIPF3-212ENST00000503972 MEGF6O75095 1541 aa20.39■□□□□ 0.85
YIPF3-212ENST00000503972 PLEKHG2Q9H7P9 1386 aa20.39■□□□□ 0.85
YIPF3-212ENST00000503972 SPATA31A1Q5TZJ5 1347 aa20.39■□□□□ 0.85
YIPF3-212ENST00000503972 SPATA31A5Q5VU36 1347 aa20.39■□□□□ 0.85
YIPF3-212ENST00000503972 SPATA31A7Q8IWB4 1347 aa20.39■□□□□ 0.85
YIPF3-212ENST00000503972 TATP17735 454 aaPredicted RBP20.39■□□□□ 0.85
YIPF3-212ENST00000503972 VPS72Q15906 364 aa20.39■□□□□ 0.85
YIPF3-212ENST00000503972 MTHFSDQ2M296 383 aaKnown RBP20.39■□□□□ 0.85
YIPF3-212ENST00000503972 USP35Q9P2H5 1018 aa20.39■□□□□ 0.85
YIPF3-212ENST00000503972 RRP7AQ9Y3A4 280 aaKnown RBP20.39■□□□□ 0.85
YIPF3-212ENST00000503972 SALL2Q9Y467 1007 aaPredicted RBP20.39■□□□□ 0.85
YIPF3-212ENST00000503972 ZBED9Q6R2W3 1325 aa20.38■□□□□ 0.85
YIPF3-212ENST00000503972 NEUROD2Q15784 382 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms