RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
PROM1-204ENST00000503884 NLRP6P59044 892 aa12.96□□□□□ -0.33
PROM1-204ENST00000503884 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.33
PROM1-204ENST00000503884 SIN3AQ96ST3 1273 aa12.96□□□□□ -0.33
PROM1-204ENST00000503884 CPSF1Q10570 1443 aaKnown RBP12.96□□□□□ -0.34
PROM1-204ENST00000503884 EVC2Q86UK5 1308 aa12.95□□□□□ -0.34
PROM1-204ENST00000503884 MON2Q7Z3U7 1717 aa12.95□□□□□ -0.34
PROM1-204ENST00000503884 USP54Q70EL1 1684 aa12.95□□□□□ -0.34
PROM1-204ENST00000503884 NFAT5O94916 1531 aa12.94□□□□□ -0.34
PROM1-204ENST00000503884 DCAF8L1A6NGE4 600 aa12.94□□□□□ -0.34
PROM1-204ENST00000503884 AXIN2Q9Y2T1 843 aa12.94□□□□□ -0.34
PROM1-204ENST00000503884 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
PROM1-204ENST00000503884 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
PROM1-204ENST00000503884 ARHGEF25Q86VW2 580 aa12.93□□□□□ -0.34
PROM1-204ENST00000503884 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
PROM1-204ENST00000503884 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
PROM1-204ENST00000503884 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
PROM1-204ENST00000503884 BCL9O00512 1426 aa12.93□□□□□ -0.34
PROM1-204ENST00000503884 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
PROM1-204ENST00000503884 SBNO2Q9Y2G9 1366 aa12.93□□□□□ -0.34
PROM1-204ENST00000503884 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
PROM1-204ENST00000503884 ABCC6O95255 1503 aa12.92□□□□□ -0.34
PROM1-204ENST00000503884 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
PROM1-204ENST00000503884 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
PROM1-204ENST00000503884 PLSCR1O15162 318 aa12.9□□□□□ -0.34
PROM1-204ENST00000503884 DDB1Q16531 1140 aa12.9□□□□□ -0.34
PROM1-204ENST00000503884 CD163L1Q9NR16 1453 aa12.9□□□□□ -0.34
PROM1-204ENST00000503884 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
PROM1-204ENST00000503884 TOM1L2Q6ZVM7 507 aa12.89□□□□□ -0.35
PROM1-204ENST00000503884 KCNH5Q8NCM2 988 aa12.89□□□□□ -0.35
PROM1-204ENST00000503884 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
PROM1-204ENST00000503884 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
PROM1-204ENST00000503884 ZBTB7CA1YPR0 619 aa12.88□□□□□ -0.35
PROM1-204ENST00000503884 PTF1AQ7RTS3 328 aa12.88□□□□□ -0.35
PROM1-204ENST00000503884 MARCH10Q8NA82 808 aaPredicted RBP12.88□□□□□ -0.35
PROM1-204ENST00000503884 CDCA7Q9BWT1 371 aaPredicted RBP12.88□□□□□ -0.35
PROM1-204ENST00000503884 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
PROM1-204ENST00000503884 LTN1O94822 1766 aa12.87□□□□□ -0.35
PROM1-204ENST00000503884 KTN1Q86UP2 1357 aaKnown RBP12.87□□□□□ -0.35
PROM1-204ENST00000503884 NEUROD1Q13562 356 aa12.87□□□□□ -0.35
PROM1-204ENST00000503884 BCL11BQ9C0K0 894 aaPredicted RBP12.87□□□□□ -0.35
PROM1-204ENST00000503884 PROM2Q8N271 834 aa12.86□□□□□ -0.35
PROM1-204ENST00000503884 CCDC7Q96M83 1385 aa12.84□□□□□ -0.35
PROM1-204ENST00000503884 NHSQ6T4R5 1651 aa12.84□□□□□ -0.35
PROM1-204ENST00000503884 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
PROM1-204ENST00000503884 TNS2Q63HR2 1409 aa12.84□□□□□ -0.35
PROM1-204ENST00000503884 KCNQ2O43526 872 aa12.83□□□□□ -0.36
PROM1-204ENST00000503884 UTRNP46939 3433 aa12.83□□□□□ -0.36
PROM1-204ENST00000503884 SOX12O15370 315 aa12.82□□□□□ -0.36
PROM1-204ENST00000503884 NME9Q86XW9 330 aa12.82□□□□□ -0.36
PROM1-204ENST00000503884 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
PROM1-204ENST00000503884 CARD11Q9BXL7 1154 aa12.82□□□□□ -0.36
PROM1-204ENST00000503884 SPON1Q9HCB6 807 aa12.82□□□□□ -0.36
PROM1-204ENST00000503884 ERBB3P21860 1342 aa12.82□□□□□ -0.36
PROM1-204ENST00000503884 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
PROM1-204ENST00000503884 EXOC5O00471 708 aa12.81□□□□□ -0.36
PROM1-204ENST00000503884 CSB-PGBD3P0DP91 1061 aa12.81□□□□□ -0.36
PROM1-204ENST00000503884 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
PROM1-204ENST00000503884 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
PROM1-204ENST00000503884 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
PROM1-204ENST00000503884 SLC12A5Q9H2X9 1139 aa12.8□□□□□ -0.36
PROM1-204ENST00000503884 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
PROM1-204ENST00000503884 NINLQ9Y2I6 1382 aa12.8□□□□□ -0.36
PROM1-204ENST00000503884 BTAF1O14981 1849 aa12.79□□□□□ -0.36
PROM1-204ENST00000503884 TXNRD1Q16881 649 aa12.79□□□□□ -0.36
PROM1-204ENST00000503884 FAM208AQ9UK61 1670 aaKnown RBP12.79□□□□□ -0.36
PROM1-204ENST00000503884 MYOM1P52179 1685 aa12.78□□□□□ -0.36
PROM1-204ENST00000503884 TESK2Q96S53 571 aa12.78□□□□□ -0.36
PROM1-204ENST00000503884 HDGFL2Q7Z4V5 671 aaPredicted RBP12.77□□□□□ -0.37
PROM1-204ENST00000503884 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
PROM1-204ENST00000503884 IL2RBP14784 551 aa12.76□□□□□ -0.37
PROM1-204ENST00000503884 PTGER2P43116 358 aa12.76□□□□□ -0.37
PROM1-204ENST00000503884 SLC15A2Q16348 729 aa12.76□□□□□ -0.37
PROM1-204ENST00000503884 TMC1Q8TDI8 760 aa12.76□□□□□ -0.37
PROM1-204ENST00000503884 ANKRD24Q8TF21 1146 aa12.76□□□□□ -0.37
PROM1-204ENST00000503884 TONSLQ96HA7 1378 aa12.76□□□□□ -0.37
PROM1-204ENST00000503884 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
PROM1-204ENST00000503884 NLRP2Q9NX02 1062 aa12.75□□□□□ -0.37
PROM1-204ENST00000503884 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
PROM1-204ENST00000503884 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
PROM1-204ENST00000503884 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
PROM1-204ENST00000503884 QSER1Q2KHR3 1735 aa12.74□□□□□ -0.37
PROM1-204ENST00000503884 IP6K1Q92551 441 aa12.74□□□□□ -0.37
PROM1-204ENST00000503884 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
PROM1-204ENST00000503884 PCGF6Q9BYE7 350 aa12.74□□□□□ -0.37
PROM1-204ENST00000503884 COL24A1Q17RW2 1714 aa12.74□□□□□ -0.37
PROM1-204ENST00000503884 ZBTB7AO95365 584 aa12.73□□□□□ -0.37
PROM1-204ENST00000503884 ACSBG1Q96GR2 724 aa12.73□□□□□ -0.37
PROM1-204ENST00000503884 STK32BQ9NY57 414 aa12.73□□□□□ -0.37
PROM1-204ENST00000503884 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
PROM1-204ENST00000503884 LY75O60449 1722 aa12.71□□□□□ -0.37
PROM1-204ENST00000503884 YY1P25490 414 aa12.71□□□□□ -0.37
PROM1-204ENST00000503884 MTFR1LQ9H019 292 aa12.71□□□□□ -0.37
PROM1-204ENST00000503884 DOT1LQ8TEK3 1739 aa12.71□□□□□ -0.38
PROM1-204ENST00000503884 MAP3K19Q56UN5 1328 aa12.7□□□□□ -0.38
PROM1-204ENST00000503884 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
PROM1-204ENST00000503884 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
PROM1-204ENST00000503884 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
PROM1-204ENST00000503884 ANKRD36BQ8N2N9 1353 aa12.69□□□□□ -0.38
PROM1-204ENST00000503884 SLC24A1O60721 1099 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms