RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 GPBP1L1Q9HC44 474 aaPredicted RBP17.28■□□□□ 0.36
TNPO1-202ENST00000503084 ITSN1Q15811 1721 aa17.27■□□□□ 0.36
TNPO1-202ENST00000503084 MINK1Q8N4C8 1332 aaPredicted RBP17.27■□□□□ 0.36
TNPO1-202ENST00000503084 YBX3P16989 372 aaKnown RBP eCLIP17.27■□□□□ 0.36
TNPO1-202ENST00000503084 CFAP70Q5T0N1 1121 aa17.27■□□□□ 0.36
TNPO1-202ENST00000503084 MARCH10Q8NA82 808 aaPredicted RBP17.27■□□□□ 0.36
TNPO1-202ENST00000503084 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.36
TNPO1-202ENST00000503084 ADCY9O60503 1353 aa17.26■□□□□ 0.35
TNPO1-202ENST00000503084 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
TNPO1-202ENST00000503084 USP19O94966 1318 aa17.24■□□□□ 0.35
TNPO1-202ENST00000503084 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
TNPO1-202ENST00000503084 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
TNPO1-202ENST00000503084 WASLO00401 505 aaPredicted RBP17.23■□□□□ 0.35
TNPO1-202ENST00000503084 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
TNPO1-202ENST00000503084 GRIN3BO60391 1043 aa17.22■□□□□ 0.35
TNPO1-202ENST00000503084 COL13A1Q5TAT6 717 aaPredicted RBP17.22■□□□□ 0.35
TNPO1-202ENST00000503084 NHSQ6T4R5 1651 aa17.22■□□□□ 0.35
TNPO1-202ENST00000503084 POLD1P28340 1107 aa17.2■□□□□ 0.34
TNPO1-202ENST00000503084 POLR3AO14802 1390 aaPredicted RBP17.18■□□□□ 0.34
TNPO1-202ENST00000503084 APLP1P51693 650 aa17.18■□□□□ 0.34
TNPO1-202ENST00000503084 PRELPP51888 382 aa17.18■□□□□ 0.34
TNPO1-202ENST00000503084 DNAJC5GQ8N7S2 189 aa17.18■□□□□ 0.34
TNPO1-202ENST00000503084 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
TNPO1-202ENST00000503084 SLC34A2O95436 690 aa17.17■□□□□ 0.34
TNPO1-202ENST00000503084 TRAK1Q9UPV9 953 aa17.17■□□□□ 0.34
TNPO1-202ENST00000503084 ZBTB7CA1YPR0 619 aa17.16■□□□□ 0.34
TNPO1-202ENST00000503084 GCP02774 474 aa17.16■□□□□ 0.34
TNPO1-202ENST00000503084 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
TNPO1-202ENST00000503084 ABTB2Q8N961 1025 aa17.16■□□□□ 0.34
TNPO1-202ENST00000503084 TUBGCP6Q96RT7 1819 aa17.15■□□□□ 0.34
TNPO1-202ENST00000503084 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
TNPO1-202ENST00000503084 NUDT16Q96DE0 195 aaKnown RBP17.15■□□□□ 0.34
TNPO1-202ENST00000503084 BTAF1O14981 1849 aa17.14■□□□□ 0.34
TNPO1-202ENST00000503084 TNS2Q63HR2 1409 aa17.14■□□□□ 0.33
TNPO1-202ENST00000503084 KIF3CO14782 793 aa17.14■□□□□ 0.33
TNPO1-202ENST00000503084 SLC16A10Q8TF71 515 aa17.14■□□□□ 0.33
TNPO1-202ENST00000503084 ARHGEF28Q8N1W1 1705 aaKnown RBP17.13■□□□□ 0.33
TNPO1-202ENST00000503084 LRRC4BQ9NT99 713 aa17.13■□□□□ 0.33
TNPO1-202ENST00000503084 ACEP12821 1306 aa17.13■□□□□ 0.33
TNPO1-202ENST00000503084 PNPLA7Q6ZV29 1317 aa17.13■□□□□ 0.33
TNPO1-202ENST00000503084 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
TNPO1-202ENST00000503084 PCNTO95613 3336 aa17.13■□□□□ 0.33
TNPO1-202ENST00000503084 COL18A1P39060 1754 aa17.12■□□□□ 0.33
TNPO1-202ENST00000503084 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
TNPO1-202ENST00000503084 CDCA7Q9BWT1 371 aaPredicted RBP17.12■□□□□ 0.33
TNPO1-202ENST00000503084 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
TNPO1-202ENST00000503084 ACSBG1Q96GR2 724 aa17.11■□□□□ 0.33
TNPO1-202ENST00000503084 SLIT3O75094 1523 aa17.1■□□□□ 0.33
TNPO1-202ENST00000503084 WDR90Q96KV7 1748 aa17.1■□□□□ 0.33
TNPO1-202ENST00000503084 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
TNPO1-202ENST00000503084 ABCC6O95255 1503 aa17.09■□□□□ 0.33
TNPO1-202ENST00000503084 USP6P35125 1406 aa17.08■□□□□ 0.32
TNPO1-202ENST00000503084 TRPM1Q7Z4N2 1603 aa17.07■□□□□ 0.32
TNPO1-202ENST00000503084 EXOC5O00471 708 aa17.06■□□□□ 0.32
TNPO1-202ENST00000503084 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
TNPO1-202ENST00000503084 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
TNPO1-202ENST00000503084 JMYQ8N9B5 988 aa17.04■□□□□ 0.32
TNPO1-202ENST00000503084 CARD10Q9BWT7 1032 aa17.04■□□□□ 0.32
TNPO1-202ENST00000503084 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
TNPO1-202ENST00000503084 PLEKHG3A1L390 1219 aa17.03■□□□□ 0.32
TNPO1-202ENST00000503084 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
TNPO1-202ENST00000503084 TFCP2L1Q9NZI6 479 aa17.03■□□□□ 0.32
TNPO1-202ENST00000503084 PPIP5K1Q6PFW1 1433 aa17.03■□□□□ 0.32
TNPO1-202ENST00000503084 HTRA3P83110 453 aa17.02■□□□□ 0.32
TNPO1-202ENST00000503084 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
TNPO1-202ENST00000503084 CCDC61Q9Y6R9 512 aa17.02■□□□□ 0.32
TNPO1-202ENST00000503084 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
TNPO1-202ENST00000503084 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
TNPO1-202ENST00000503084 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
TNPO1-202ENST00000503084 MSL1Q68DK7 614 aa17■□□□□ 0.31
TNPO1-202ENST00000503084 PIK3C2AO00443 1686 aa17■□□□□ 0.31
TNPO1-202ENST00000503084 TOMM70O94826 608 aa16.99■□□□□ 0.31
TNPO1-202ENST00000503084 KCNQ4P56696 695 aa16.99■□□□□ 0.31
TNPO1-202ENST00000503084 PPARGC1BQ86YN6 1023 aaKnown RBP16.99■□□□□ 0.31
TNPO1-202ENST00000503084 NLRP6P59044 892 aa16.98■□□□□ 0.31
TNPO1-202ENST00000503084 MPHOSPH9Q99550 1183 aa16.98■□□□□ 0.31
TNPO1-202ENST00000503084 KAT6BQ8WYB5 2073 aa16.98■□□□□ 0.31
TNPO1-202ENST00000503084 CICQ96RK0 1608 aaPredicted RBP16.97■□□□□ 0.31
TNPO1-202ENST00000503084 WWC3Q9ULE0 1092 aa16.97■□□□□ 0.31
TNPO1-202ENST00000503084 CD2APQ9Y5K6 639 aa16.97■□□□□ 0.31
TNPO1-202ENST00000503084 MSH5O43196 834 aa16.95■□□□□ 0.3
TNPO1-202ENST00000503084 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
TNPO1-202ENST00000503084 LY75O60449 1722 aa16.93■□□□□ 0.3
TNPO1-202ENST00000503084 COL23A1Q86Y22 540 aaPredicted RBP16.93■□□□□ 0.3
TNPO1-202ENST00000503084 IGSF1Q8N6C5 1336 aa16.93■□□□□ 0.3
TNPO1-202ENST00000503084 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
TNPO1-202ENST00000503084 QRICH2Q9H0J4 1663 aa16.91■□□□□ 0.3
TNPO1-202ENST00000503084 NFAT5O94916 1531 aa16.91■□□□□ 0.3
TNPO1-202ENST00000503084 SOX12O15370 315 aa16.9■□□□□ 0.3
TNPO1-202ENST00000503084 RBM46Q8TBY0 533 aaKnown RBP16.89■□□□□ 0.29
TNPO1-202ENST00000503084 IL2RBP14784 551 aa16.88■□□□□ 0.29
TNPO1-202ENST00000503084 PCDH10Q9P2E7 1040 aa16.88■□□□□ 0.29
TNPO1-202ENST00000503084 NSD2O96028 1365 aa16.88■□□□□ 0.29
TNPO1-202ENST00000503084 DOT1LQ8TEK3 1739 aa16.87■□□□□ 0.29
TNPO1-202ENST00000503084 HSPA1AP0DMV8 641 aaKnown RBP16.87■□□□□ 0.29
TNPO1-202ENST00000503084 HSPA1BP0DMV9 641 aaKnown RBP16.87■□□□□ 0.29
TNPO1-202ENST00000503084 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
TNPO1-202ENST00000503084 SRPK2P78362 688 aaKnown RBP16.85■□□□□ 0.29
TNPO1-202ENST00000503084 NLRP2Q9NX02 1062 aa16.85■□□□□ 0.29
TNPO1-202ENST00000503084 CCNL1Q9UK58 526 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms