RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 TRIM37O94972 964 aa15.3■□□□□ 0.04
SNCA-207ENST00000502987 FAM196AQ6ZSG2 479 aa15.3■□□□□ 0.04
SNCA-207ENST00000502987 THSD7AQ9UPZ6 1657 aa15.29■□□□□ 0.04
SNCA-207ENST00000502987 NRKQ7Z2Y5 1582 aa15.29■□□□□ 0.04
SNCA-207ENST00000502987 SSH2Q76I76 1423 aa15.29■□□□□ 0.04
SNCA-207ENST00000502987 BRD4O60885 1362 aaPredicted RBP15.29■□□□□ 0.04
SNCA-207ENST00000502987 USP19O94966 1318 aa15.29■□□□□ 0.04
SNCA-207ENST00000502987 TCP11L2Q8N4U5 519 aa15.29■□□□□ 0.04
SNCA-207ENST00000502987 CAMTA1Q9Y6Y1 1673 aa15.28■□□□□ 0.04
SNCA-207ENST00000502987 CPDO75976 1380 aa15.28■□□□□ 0.04
SNCA-207ENST00000502987 USP6P35125 1406 aa15.27■□□□□ 0.04
SNCA-207ENST00000502987 HAX1O00165 279 aa15.27■□□□□ 0.04
SNCA-207ENST00000502987 SOX12O15370 315 aa15.27■□□□□ 0.04
SNCA-207ENST00000502987 APBA3O96018 575 aa15.27■□□□□ 0.04
SNCA-207ENST00000502987 BARGINQ6ZT62 677 aa15.27■□□□□ 0.04
SNCA-207ENST00000502987 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
SNCA-207ENST00000502987 EZH2Q15910 746 aaKnown RBP15.25■□□□□ 0.03
SNCA-207ENST00000502987 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
SNCA-207ENST00000502987 R3HDM1Q15032 1099 aaKnown RBP15.24■□□□□ 0.03
SNCA-207ENST00000502987 TOM1L2Q6ZVM7 507 aa15.24■□□□□ 0.03
SNCA-207ENST00000502987 CARD11Q9BXL7 1154 aa15.24■□□□□ 0.03
SNCA-207ENST00000502987 LMO7Q8WWI1 1683 aa15.24■□□□□ 0.03
SNCA-207ENST00000502987 TTC21BQ7Z4L5 1316 aa15.23■□□□□ 0.03
SNCA-207ENST00000502987 TNS1Q9HBL0 1735 aaKnown RBP15.23■□□□□ 0.03
SNCA-207ENST00000502987 COL5A2P05997 1499 aaPredicted RBP15.22■□□□□ 0.03
SNCA-207ENST00000502987 KCNH5Q8NCM2 988 aa15.22■□□□□ 0.03
SNCA-207ENST00000502987 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
SNCA-207ENST00000502987 AATKQ6ZMQ8 1374 aa15.22■□□□□ 0.03
SNCA-207ENST00000502987 KTN1Q86UP2 1357 aaKnown RBP15.22■□□□□ 0.03
SNCA-207ENST00000502987 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
SNCA-207ENST00000502987 CRB1P82279 1406 aa15.21■□□□□ 0.03
SNCA-207ENST00000502987 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
SNCA-207ENST00000502987 PIK3C2AO00443 1686 aa15.21■□□□□ 0.03
SNCA-207ENST00000502987 AKAP12Q02952 1782 aa15.21■□□□□ 0.02
SNCA-207ENST00000502987 TTC21AQ8NDW8 1320 aa15.2■□□□□ 0.02
SNCA-207ENST00000502987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.2■□□□□ 0.02
SNCA-207ENST00000502987 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
SNCA-207ENST00000502987 RGPD5Q99666 1765 aa15.19■□□□□ 0.02
SNCA-207ENST00000502987 SLIT3O75094 1523 aa15.19■□□□□ 0.02
SNCA-207ENST00000502987 DDB1Q16531 1140 aa15.19■□□□□ 0.02
SNCA-207ENST00000502987 AXIN2Q9Y2T1 843 aa15.19■□□□□ 0.02
SNCA-207ENST00000502987 DISP2A7MBM2 1401 aa15.18■□□□□ 0.02
SNCA-207ENST00000502987 NBPF14Q5TI25 921 aa15.18■□□□□ 0.02
SNCA-207ENST00000502987 PARP4Q9UKK3 1724 aaKnown RBP15.17■□□□□ 0.02
SNCA-207ENST00000502987 C11orf95C9JLR9 678 aaPredicted RBP15.17■□□□□ 0.02
SNCA-207ENST00000502987 HDGFL2Q7Z4V5 671 aaPredicted RBP15.17■□□□□ 0.02
SNCA-207ENST00000502987 ARHGEF25Q86VW2 580 aa15.17■□□□□ 0.02
SNCA-207ENST00000502987 CLEC11AQ9Y240 323 aa15.17■□□□□ 0.02
SNCA-207ENST00000502987 WDR17Q8IZU2 1322 aa15.17■□□□□ 0.02
SNCA-207ENST00000502987 CPSF1Q10570 1443 aaKnown RBP15.16■□□□□ 0.02
SNCA-207ENST00000502987 COL18A1P39060 1754 aa15.16■□□□□ 0.02
SNCA-207ENST00000502987 PARD3Q8TEW0 1356 aa15.15■□□□□ 0.02
SNCA-207ENST00000502987 LRP5O75197 1615 aa15.15■□□□□ 0.02
SNCA-207ENST00000502987 CDCA7Q9BWT1 371 aaPredicted RBP15.14■□□□□ 0.01
SNCA-207ENST00000502987 SLC12A5Q9H2X9 1139 aa15.14■□□□□ 0.01
SNCA-207ENST00000502987 OVOS2A0A0G2JMS6 1433 aa15.14■□□□□ 0.01
SNCA-207ENST00000502987 OVOS2A0A0J9YW53 1432 aa15.14■□□□□ 0.01
SNCA-207ENST00000502987 OVOS2Q6IE36 1432 aa15.14■□□□□ 0.01
SNCA-207ENST00000502987 EXOC5O00471 708 aa15.13■□□□□ 0.01
SNCA-207ENST00000502987 MON2Q7Z3U7 1717 aa15.13■□□□□ 0.01
SNCA-207ENST00000502987 NME9Q86XW9 330 aa15.13■□□□□ 0.01
SNCA-207ENST00000502987 CARD10Q9BWT7 1032 aa15.13■□□□□ 0.01
SNCA-207ENST00000502987 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
SNCA-207ENST00000502987 SBNO2Q9Y2G9 1366 aa15.12■□□□□ 0.01
SNCA-207ENST00000502987 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
SNCA-207ENST00000502987 SSUH2Q9Y2M2 353 aa15.12■□□□□ 0.01
SNCA-207ENST00000502987 SBF2Q86WG5 1849 aa15.12■□□□□ 0.01
SNCA-207ENST00000502987 TRIM26Q12899 539 aaPredicted RBP15.11■□□□□ 0.01
SNCA-207ENST00000502987 NLRP2Q9NX02 1062 aa15.11■□□□□ 0.01
SNCA-207ENST00000502987 WNK3Q9BYP7 1800 aa15.1■□□□□ 0.01
SNCA-207ENST00000502987 LRRC37A3O60309 1634 aa15.1■□□□□ 0.01
SNCA-207ENST00000502987 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
SNCA-207ENST00000502987 RREB1Q92766 1687 aa15.1■□□□□ 0.01
SNCA-207ENST00000502987 NUP188Q5SRE5 1749 aa15.1■□□□□ 0.01
SNCA-207ENST00000502987 MARCH10Q8NA82 808 aaPredicted RBP15.1■□□□□ 0.01
SNCA-207ENST00000502987 LTN1O94822 1766 aa15.09■□□□□ 0.01
SNCA-207ENST00000502987 NFAT5O94916 1531 aa15.09■□□□□ 0.01
SNCA-207ENST00000502987 ST20-MTHFSA0A0A6YYL1 179 aa15.09■□□□□ 0.01
SNCA-207ENST00000502987 EVX2Q03828 476 aa15.09■□□□□ 0.01
SNCA-207ENST00000502987 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
SNCA-207ENST00000502987 CCDC7Q96M83 1385 aa15.09■□□□□ 0.01
SNCA-207ENST00000502987 PRKAR2AP13861 404 aaKnown RBP15.08■□□□□ 0
SNCA-207ENST00000502987 PEAK1Q9H792 1746 aa15.08■□□□□ 0
SNCA-207ENST00000502987 USP31Q70CQ4 1352 aa15.08■□□□□ 0
SNCA-207ENST00000502987 PLSCR1O15162 318 aa15.07■□□□□ 0
SNCA-207ENST00000502987 SLC24A1O60721 1099 aa15.07■□□□□ 0
SNCA-207ENST00000502987 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
SNCA-207ENST00000502987 PPP1R1BQ9UD71 204 aaPredicted RBP15.07■□□□□ 0
SNCA-207ENST00000502987 EDC4Q6P2E9 1401 aaKnown RBP15.07■□□□□ 0
SNCA-207ENST00000502987 CD163L1Q9NR16 1453 aa15.07■□□□□ 0
SNCA-207ENST00000502987 ANKRD24Q8TF21 1146 aa15.06■□□□□ 0
SNCA-207ENST00000502987 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
SNCA-207ENST00000502987 LTV1Q96GA3 475 aaPredicted RBP15.05■□□□□ -0
SNCA-207ENST00000502987 SPON1Q9HCB6 807 aa15.05■□□□□ -0
SNCA-207ENST00000502987 A0A1W2PP64 1363 aa15.05■□□□□ -0
SNCA-207ENST00000502987 IL2RBP14784 551 aa15.04■□□□□ -0
SNCA-207ENST00000502987 ACSBG1Q96GR2 724 aa15.04■□□□□ -0
SNCA-207ENST00000502987 COG3Q96JB2 828 aa15.04■□□□□ -0
SNCA-207ENST00000502987 ABCC6O95255 1503 aa15.03■□□□□ -0
SNCA-207ENST00000502987 ERBB3P21860 1342 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms