RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 NUTM2GQ5VZR2 741 aa8.78□□□□□ -1
LSM3P4-201ENST00000502948 CABP2Q9NPB3 220 aa8.78□□□□□ -1
LSM3P4-201ENST00000502948 RGPD5Q99666 1765 aa8.78□□□□□ -1
LSM3P4-201ENST00000502948 WDR17Q8IZU2 1322 aa8.78□□□□□ -1
LSM3P4-201ENST00000502948 USP31Q70CQ4 1352 aa8.77□□□□□ -1.01
LSM3P4-201ENST00000502948 NFAT5O94916 1531 aa8.77□□□□□ -1.01
LSM3P4-201ENST00000502948 PSDA5PKW4 1024 aaPredicted RBP8.77□□□□□ -1.01
LSM3P4-201ENST00000502948 R3HDM1Q15032 1099 aaKnown RBP8.77□□□□□ -1.01
LSM3P4-201ENST00000502948 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
LSM3P4-201ENST00000502948 ARHGEF25Q86VW2 580 aa8.77□□□□□ -1.01
LSM3P4-201ENST00000502948 PUS7Q96PZ0 661 aaKnown RBP8.77□□□□□ -1.01
LSM3P4-201ENST00000502948 USP35Q9P2H5 1018 aa8.76□□□□□ -1.01
LSM3P4-201ENST00000502948 TTC21BQ7Z4L5 1316 aa8.76□□□□□ -1.01
LSM3P4-201ENST00000502948 ROCK2O75116 1388 aaKnown RBP8.75□□□□□ -1.01
LSM3P4-201ENST00000502948 CCDC7Q96M83 1385 aa8.75□□□□□ -1.01
LSM3P4-201ENST00000502948 DDB1Q16531 1140 aa8.75□□□□□ -1.01
LSM3P4-201ENST00000502948 CARD10Q9BWT7 1032 aa8.75□□□□□ -1.01
LSM3P4-201ENST00000502948 BCL11BQ9C0K0 894 aaPredicted RBP8.75□□□□□ -1.01
LSM3P4-201ENST00000502948 CASZ1Q86V15 1759 aa8.75□□□□□ -1.01
LSM3P4-201ENST00000502948 LTN1O94822 1766 aa8.74□□□□□ -1.01
LSM3P4-201ENST00000502948 SLC24A1O60721 1099 aa8.74□□□□□ -1.01
LSM3P4-201ENST00000502948 TOM1L2Q6ZVM7 507 aa8.74□□□□□ -1.01
LSM3P4-201ENST00000502948 AXIN2Q9Y2T1 843 aa8.74□□□□□ -1.01
LSM3P4-201ENST00000502948 FAM208AQ9UK61 1670 aaKnown RBP8.74□□□□□ -1.01
LSM3P4-201ENST00000502948 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
LSM3P4-201ENST00000502948 NHSQ6T4R5 1651 aa8.73□□□□□ -1.01
LSM3P4-201ENST00000502948 CD163L1Q9NR16 1453 aa8.73□□□□□ -1.01
LSM3P4-201ENST00000502948 KTN1Q86UP2 1357 aaKnown RBP8.73□□□□□ -1.01
LSM3P4-201ENST00000502948 TNS2Q63HR2 1409 aa8.72□□□□□ -1.01
LSM3P4-201ENST00000502948 KCNQ2O43526 872 aa8.72□□□□□ -1.01
LSM3P4-201ENST00000502948 SPON1Q9HCB6 807 aa8.72□□□□□ -1.01
LSM3P4-201ENST00000502948 MARCH10Q8NA82 808 aaPredicted RBP8.71□□□□□ -1.02
LSM3P4-201ENST00000502948 ERBB3P21860 1342 aa8.71□□□□□ -1.02
LSM3P4-201ENST00000502948 QSER1Q2KHR3 1735 aa8.71□□□□□ -1.02
LSM3P4-201ENST00000502948 EDC4Q6P2E9 1401 aaKnown RBP8.71□□□□□ -1.02
LSM3P4-201ENST00000502948 EXOC5O00471 708 aa8.7□□□□□ -1.02
LSM3P4-201ENST00000502948 SIN3AQ96ST3 1273 aa8.7□□□□□ -1.02
LSM3P4-201ENST00000502948 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
LSM3P4-201ENST00000502948 COL24A1Q17RW2 1714 aa8.69□□□□□ -1.02
LSM3P4-201ENST00000502948 PROM2Q8N271 834 aa8.69□□□□□ -1.02
LSM3P4-201ENST00000502948 HDGFL2Q7Z4V5 671 aaPredicted RBP8.68□□□□□ -1.02
LSM3P4-201ENST00000502948 TERF2IPQ9NYB0 399 aa8.68□□□□□ -1.02
LSM3P4-201ENST00000502948 BTAF1O14981 1849 aa8.68□□□□□ -1.02
LSM3P4-201ENST00000502948 TXNRD1Q16881 649 aa8.67□□□□□ -1.02
LSM3P4-201ENST00000502948 CARD11Q9BXL7 1154 aa8.67□□□□□ -1.02
LSM3P4-201ENST00000502948 A0A1W2PP64 1363 aa8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 MAP3K5Q99683 1374 aa8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 DCAF8L1A6NGE4 600 aa8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 CSB-PGBD3P0DP91 1061 aa8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 IL2RBP14784 551 aa8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 SLC15A2Q16348 729 aa8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 ANO8Q9HCE9 1232 aaPredicted RBP8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 CHD4Q14839 1912 aa8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 LY75O60449 1722 aa8.66□□□□□ -1.02
LSM3P4-201ENST00000502948 TONSLQ96HA7 1378 aa8.65□□□□□ -1.02
LSM3P4-201ENST00000502948 PTGER2P43116 358 aa8.65□□□□□ -1.02
LSM3P4-201ENST00000502948 NEUROD1Q13562 356 aa8.65□□□□□ -1.02
LSM3P4-201ENST00000502948 IP6K1Q92551 441 aa8.65□□□□□ -1.02
LSM3P4-201ENST00000502948 TESK2Q96S53 571 aa8.65□□□□□ -1.02
LSM3P4-201ENST00000502948 MYOM1P52179 1685 aa8.65□□□□□ -1.03
LSM3P4-201ENST00000502948 RTL1A6NKG5 1358 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 KIF24Q5T7B8 1368 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 SHANK3Q9BYB0 1731 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 ZBTB7CA1YPR0 619 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 HMGB2P26583 209 aaKnown RBP8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 PTF1AQ7RTS3 328 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 NME9Q86XW9 330 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 SGIP1Q9BQI5 828 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 MTFR1LQ9H019 292 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 SLC12A5Q9H2X9 1139 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 STK32BQ9NY57 414 aa8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 PPP1R1BQ9UD71 204 aaPredicted RBP8.64□□□□□ -1.03
LSM3P4-201ENST00000502948 CGNL1Q0VF96 1302 aa8.63□□□□□ -1.03
LSM3P4-201ENST00000502948 SLC27A3Q5K4L6 730 aa8.63□□□□□ -1.03
LSM3P4-201ENST00000502948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.63□□□□□ -1.03
LSM3P4-201ENST00000502948 ANKRD24Q8TF21 1146 aa8.63□□□□□ -1.03
LSM3P4-201ENST00000502948 SLC16A10Q8TF71 515 aa8.63□□□□□ -1.03
LSM3P4-201ENST00000502948 ANKRD36BQ8N2N9 1353 aa8.62□□□□□ -1.03
LSM3P4-201ENST00000502948 YY1P25490 414 aa8.62□□□□□ -1.03
LSM3P4-201ENST00000502948 TMC1Q8TDI8 760 aa8.62□□□□□ -1.03
LSM3P4-201ENST00000502948 NLRP2Q9NX02 1062 aa8.62□□□□□ -1.03
LSM3P4-201ENST00000502948 SOX12O15370 315 aa8.61□□□□□ -1.03
LSM3P4-201ENST00000502948 COG3Q96JB2 828 aa8.61□□□□□ -1.03
LSM3P4-201ENST00000502948 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
LSM3P4-201ENST00000502948 RGPD2P0DJD1 1756 aa8.61□□□□□ -1.03
LSM3P4-201ENST00000502948 KIF20BQ96Q89 1820 aa8.6□□□□□ -1.03
LSM3P4-201ENST00000502948 SYT17Q9BSW7 474 aa8.6□□□□□ -1.03
LSM3P4-201ENST00000502948 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
LSM3P4-201ENST00000502948 DOT1LQ8TEK3 1739 aa8.6□□□□□ -1.03
LSM3P4-201ENST00000502948 ANKRD26Q9UPS8 1709 aa8.6□□□□□ -1.03
LSM3P4-201ENST00000502948 NSD2O96028 1365 aa8.6□□□□□ -1.03
LSM3P4-201ENST00000502948 PLEKHG2Q9H7P9 1386 aa8.6□□□□□ -1.03
LSM3P4-201ENST00000502948 TUBGCP6Q96RT7 1819 aa8.59□□□□□ -1.03
LSM3P4-201ENST00000502948 MAP3K19Q56UN5 1328 aa8.59□□□□□ -1.03
LSM3P4-201ENST00000502948 ST20-MTHFSA0A0A6YYL1 179 aa8.59□□□□□ -1.03
LSM3P4-201ENST00000502948 HOXC9P31274 260 aa8.59□□□□□ -1.03
LSM3P4-201ENST00000502948 CDCA8Q53HL2 280 aa8.59□□□□□ -1.03
LSM3P4-201ENST00000502948 AKT1S1Q96B36 256 aa8.59□□□□□ -1.03
LSM3P4-201ENST00000502948 PDGFDQ9GZP0 370 aaPredicted RBP8.59□□□□□ -1.03
LSM3P4-201ENST00000502948 ZBTB7AO95365 584 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms