RNA–Protein interactions for RNA: ENST00000498517.5

ARHGEF3-215, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene ARHGEF3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-215ENST00000498517 SMPD1P17405 629 aa8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 HNRNPMP52272 730 aaKnown RBP eCLIP8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 TRIM32Q13049 653 aa8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 DIEXFQ68CQ4 756 aaKnown RBP8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 SYMPKQ92797 1274 aaKnown RBP8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 REPIN1Q9BWE0 567 aaKnown RBP8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 CHIC2Q9UKJ5 165 aa8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 MAPKBP1O60336 1514 aa8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 ABCC10Q5T3U5 1492 aa8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 CD109Q6YHK3 1445 aa8.12□□□□□ -1.11
ARHGEF3-215ENST00000498517 HOXA2O43364 376 aa8.11□□□□□ -1.11
ARHGEF3-215ENST00000498517 SKOR1P84550 965 aa8.11□□□□□ -1.11
ARHGEF3-215ENST00000498517 USB1Q9BQ65 265 aaKnown RBP8.11□□□□□ -1.11
ARHGEF3-215ENST00000498517 CDC42BPBQ9Y5S2 1711 aa8.1□□□□□ -1.11
ARHGEF3-215ENST00000498517 J3QL48 77 aa8.1□□□□□ -1.11
ARHGEF3-215ENST00000498517 WNT7AO00755 349 aa8.1□□□□□ -1.11
ARHGEF3-215ENST00000498517 GRIPAP1Q4V328 841 aa8.1□□□□□ -1.11
ARHGEF3-215ENST00000498517 MRGPRX2Q96LB1 330 aa8.1□□□□□ -1.11
ARHGEF3-215ENST00000498517 MINK1Q8N4C8 1332 aaPredicted RBP8.09□□□□□ -1.11
ARHGEF3-215ENST00000498517 TCOF1Q13428 1488 aaKnown RBP8.09□□□□□ -1.11
ARHGEF3-215ENST00000498517 PLEKHH2Q8IVE3 1493 aa8.09□□□□□ -1.11
ARHGEF3-215ENST00000498517 AXIN1O15169 862 aa8.09□□□□□ -1.11
ARHGEF3-215ENST00000498517 Q3C1V9 767 aa8.09□□□□□ -1.11
ARHGEF3-215ENST00000498517 FAM217BQ9NTX9 383 aaPredicted RBP8.09□□□□□ -1.11
ARHGEF3-215ENST00000498517 ABCA9Q8IUA7 1624 aa8.09□□□□□ -1.11
ARHGEF3-215ENST00000498517 TTC37Q6PGP7 1564 aa8.09□□□□□ -1.11
ARHGEF3-215ENST00000498517 ACIN1Q9UKV3 1341 aaKnown RBP8.08□□□□□ -1.12
ARHGEF3-215ENST00000498517 CAMSAP2Q08AD1 1489 aa8.08□□□□□ -1.12
ARHGEF3-215ENST00000498517 PREX2Q70Z35 1606 aa8.08□□□□□ -1.12
ARHGEF3-215ENST00000498517 ZBTB24O43167 697 aaPredicted RBP8.08□□□□□ -1.12
ARHGEF3-215ENST00000498517 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
ARHGEF3-215ENST00000498517 FANCAO15360 1455 aa8.07□□□□□ -1.12
ARHGEF3-215ENST00000498517 CLSPNQ9HAW4 1339 aa8.07□□□□□ -1.12
ARHGEF3-215ENST00000498517 TTC24A2A3L6 582 aaPredicted RBP8.07□□□□□ -1.12
ARHGEF3-215ENST00000498517 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
ARHGEF3-215ENST00000498517 TREML4Q6UXN2 200 aa8.07□□□□□ -1.12
ARHGEF3-215ENST00000498517 RRP7BPQ9NSQ0 103 aa8.07□□□□□ -1.12
ARHGEF3-215ENST00000498517 ARAP3Q8WWN8 1544 aa8.07□□□□□ -1.12
ARHGEF3-215ENST00000498517 GLI2P10070 1586 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 HECW2Q9P2P5 1572 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 DAPK1P53355 1430 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 AKNAQ7Z591 1439 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 KIAA1107Q9UPP5 1409 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 CENPBP07199 599 aaPredicted RBP8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 HPS1Q92902 700 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 GPCPD1Q9NPB8 672 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 PCDHGC3Q9UN70 934 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 TSPOAP1O95153 1857 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 ANKRD30AQ9BXX3 1397 aa8.06□□□□□ -1.12
ARHGEF3-215ENST00000498517 CFAP74Q9C0B2 1584 aa8.05□□□□□ -1.12
ARHGEF3-215ENST00000498517 SCAPERQ9BY12 1400 aa8.05□□□□□ -1.12
ARHGEF3-215ENST00000498517 SETD5Q9C0A6 1442 aa8.05□□□□□ -1.12
ARHGEF3-215ENST00000498517 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
ARHGEF3-215ENST00000498517 PTCRAQ6ISU1 281 aaPredicted RBP8.05□□□□□ -1.12
ARHGEF3-215ENST00000498517 CCDC24Q8N4L8 307 aa8.05□□□□□ -1.12
ARHGEF3-215ENST00000498517 SPAG9O60271 1321 aaKnown RBP8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 ABCC5O15440 1437 aa8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 USP46P62068 366 aa8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 AFAP1Q8N556 730 aa8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 TRIM52Q96A61 297 aa8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 DHX57Q6P158 1386 aaKnown RBP8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 ADGRL1O94910 1474 aa8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 TEX14Q8IWB6 1497 aa8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 SAMD9LQ8IVG5 1584 aa8.04□□□□□ -1.12
ARHGEF3-215ENST00000498517 DNMT1P26358 1616 aaKnown RBP8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 ARHGEF5Q12774 1597 aa8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 DIP2BQ9P265 1576 aa8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 CCDC141Q6ZP82 1450 aa8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 NEO1Q92859 1461 aa8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 ROCK1Q13464 1354 aa8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 C11orf95C9JLR9 678 aaPredicted RBP8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 JUNDP17535 347 aa8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 RC3H1Q5TC82 1133 aaKnown RBP8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 VSIG10Q8N0Z9 540 aa8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 ATP13A2Q9NQ11 1180 aa8.03□□□□□ -1.12
ARHGEF3-215ENST00000498517 CLCN1P35523 988 aa8.02□□□□□ -1.13
ARHGEF3-215ENST00000498517 NFX1Q12986 1120 aaKnown RBP8.02□□□□□ -1.13
ARHGEF3-215ENST00000498517 MAP3K4Q9Y6R4 1608 aa8.02□□□□□ -1.13
ARHGEF3-215ENST00000498517 SYCP2Q9BX26 1530 aa8.02□□□□□ -1.13
ARHGEF3-215ENST00000498517 PTPRKQ15262 1439 aa8.02□□□□□ -1.13
ARHGEF3-215ENST00000498517 C9orf84Q5VXU9 1444 aa8.02□□□□□ -1.13
ARHGEF3-215ENST00000498517 MBD5Q9P267 1494 aa8.01□□□□□ -1.13
ARHGEF3-215ENST00000498517 RAB3GAP2Q9H2M9 1393 aa8.01□□□□□ -1.13
ARHGEF3-215ENST00000498517 NCOA1Q15788 1441 aa8.01□□□□□ -1.13
ARHGEF3-215ENST00000498517 KIF13AQ9H1H9 1805 aa8.01□□□□□ -1.13
ARHGEF3-215ENST00000498517 ADGBQ8N7X0 1667 aa8□□□□□ -1.13
ARHGEF3-215ENST00000498517 RAPGEF3O95398 923 aa8□□□□□ -1.13
ARHGEF3-215ENST00000498517 NDUFV2P19404 249 aa8□□□□□ -1.13
ARHGEF3-215ENST00000498517 NEUROD1Q13562 356 aa8□□□□□ -1.13
ARHGEF3-215ENST00000498517 HFM1A2PYH4 1435 aa8□□□□□ -1.13
ARHGEF3-215ENST00000498517 DENND4BO75064 1496 aaPredicted RBP8□□□□□ -1.13
ARHGEF3-215ENST00000498517 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
ARHGEF3-215ENST00000498517 ABCC1P33527 1531 aa7.99□□□□□ -1.13
ARHGEF3-215ENST00000498517 RTEL1-TNFRSF6BF6WH68 1400 aa7.99□□□□□ -1.13
ARHGEF3-215ENST00000498517 NAIPQ13075 1403 aa7.99□□□□□ -1.13
ARHGEF3-215ENST00000498517 RETREG3Q86VR2 466 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms