RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 NFAT5O94916 1531 aa15.49■□□□□ 0.07
CTTN-208ENST00000498223 CHRNA2Q15822 529 aa15.49■□□□□ 0.07
CTTN-208ENST00000498223 DIEXFQ68CQ4 756 aaKnown RBP15.49■□□□□ 0.07
CTTN-208ENST00000498223 UNC5CLQ8IV45 518 aa15.49■□□□□ 0.07
CTTN-208ENST00000498223 GJD4Q96KN9 370 aaPredicted RBP15.49■□□□□ 0.07
CTTN-208ENST00000498223 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
CTTN-208ENST00000498223 PLCH1Q4KWH8 1693 aa15.48■□□□□ 0.07
CTTN-208ENST00000498223 RALBP1Q15311 655 aa15.48■□□□□ 0.07
CTTN-208ENST00000498223 ARHGEF25Q86VW2 580 aa15.46■□□□□ 0.07
CTTN-208ENST00000498223 EMILIN1Q9Y6C2 1016 aa15.46■□□□□ 0.07
CTTN-208ENST00000498223 COL18A1P39060 1754 aa15.46■□□□□ 0.07
CTTN-208ENST00000498223 AATKQ6ZMQ8 1374 aa15.46■□□□□ 0.07
CTTN-208ENST00000498223 MAP3K19Q56UN5 1328 aa15.45■□□□□ 0.06
CTTN-208ENST00000498223 FAM83GA6ND36 823 aa15.45■□□□□ 0.06
CTTN-208ENST00000498223 CPDO75976 1380 aa15.45■□□□□ 0.06
CTTN-208ENST00000498223 PARD3Q8TEW0 1356 aa15.45■□□□□ 0.06
CTTN-208ENST00000498223 NWD2Q9ULI1 1742 aa15.45■□□□□ 0.06
CTTN-208ENST00000498223 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.44■□□□□ 0.06
CTTN-208ENST00000498223 PEAK1Q9H792 1746 aa15.44■□□□□ 0.06
CTTN-208ENST00000498223 EVA1CP58658 441 aa15.44■□□□□ 0.06
CTTN-208ENST00000498223 PRKRIP1Q9H875 184 aaPredicted RBP15.44■□□□□ 0.06
CTTN-208ENST00000498223 POLKQ9UBT6 870 aa15.44■□□□□ 0.06
CTTN-208ENST00000498223 PPP2R1AP30153 589 aa15.43■□□□□ 0.06
CTTN-208ENST00000498223 MTHFSP49914 203 aa15.43■□□□□ 0.06
CTTN-208ENST00000498223 LTV1Q96GA3 475 aaPredicted RBP15.43■□□□□ 0.06
CTTN-208ENST00000498223 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
CTTN-208ENST00000498223 RGPD2P0DJD1 1756 aa15.43■□□□□ 0.06
CTTN-208ENST00000498223 FLT4P35916 1363 aa15.42■□□□□ 0.06
CTTN-208ENST00000498223 CSB-PGBD3P0DP91 1061 aa15.42■□□□□ 0.06
CTTN-208ENST00000498223 HOXC9P31274 260 aa15.42■□□□□ 0.06
CTTN-208ENST00000498223 VPS72Q15906 364 aa15.42■□□□□ 0.06
CTTN-208ENST00000498223 IP6K1Q92551 441 aa15.42■□□□□ 0.06
CTTN-208ENST00000498223 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
CTTN-208ENST00000498223 STRN4Q9NRL3 753 aa15.42■□□□□ 0.06
CTTN-208ENST00000498223 MYBBP1AQ9BQG0 1328 aaKnown RBP15.42■□□□□ 0.06
CTTN-208ENST00000498223 LMO7Q8WWI1 1683 aa15.41■□□□□ 0.06
CTTN-208ENST00000498223 RTL1A6NKG5 1358 aa15.41■□□□□ 0.06
CTTN-208ENST00000498223 GLI3P10071 1580 aa15.41■□□□□ 0.06
CTTN-208ENST00000498223 ABCC6O95255 1503 aa15.4■□□□□ 0.06
CTTN-208ENST00000498223 CCDC125Q86Z20 511 aa15.4■□□□□ 0.06
CTTN-208ENST00000498223 CCDC9Q9Y3X0 531 aaKnown RBP15.4■□□□□ 0.06
CTTN-208ENST00000498223 CAMTA1Q9Y6Y1 1673 aa15.4■□□□□ 0.06
CTTN-208ENST00000498223 NRAPQ86VF7 1730 aa15.4■□□□□ 0.06
CTTN-208ENST00000498223 KIF24Q5T7B8 1368 aa15.39■□□□□ 0.05
CTTN-208ENST00000498223 FAM208AQ9UK61 1670 aaKnown RBP15.39■□□□□ 0.05
CTTN-208ENST00000498223 HSP90AB2PQ58FF8 381 aa15.39■□□□□ 0.05
CTTN-208ENST00000498223 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
CTTN-208ENST00000498223 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
CTTN-208ENST00000498223 SMG6Q86US8 1419 aaKnown RBP15.39■□□□□ 0.05
CTTN-208ENST00000498223 ANKRD24Q8TF21 1146 aa15.38■□□□□ 0.05
CTTN-208ENST00000498223 ONECUT3O60422 494 aaPredicted RBP15.37■□□□□ 0.05
CTTN-208ENST00000498223 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
CTTN-208ENST00000498223 INSRP06213 1382 aa15.36■□□□□ 0.05
CTTN-208ENST00000498223 COL5A2P05997 1499 aaPredicted RBP15.36■□□□□ 0.05
CTTN-208ENST00000498223 TOM1L2Q6ZVM7 507 aa15.36■□□□□ 0.05
CTTN-208ENST00000498223 NLRP2Q9NX02 1062 aa15.36■□□□□ 0.05
CTTN-208ENST00000498223 EP400Q96L91 3159 aa15.35■□□□□ 0.05
CTTN-208ENST00000498223 DIAPH1O60610 1272 aaKnown RBP15.35■□□□□ 0.05
CTTN-208ENST00000498223 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
CTTN-208ENST00000498223 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
CTTN-208ENST00000498223 USP35Q9P2H5 1018 aa15.34■□□□□ 0.05
CTTN-208ENST00000498223 ERBB3P21860 1342 aa15.34■□□□□ 0.05
CTTN-208ENST00000498223 U2SURPO15042 1029 aaKnown RBP15.33■□□□□ 0.04
CTTN-208ENST00000498223 NUDCQ9Y266 331 aa15.33■□□□□ 0.04
CTTN-208ENST00000498223 WDR17Q8IZU2 1322 aa15.33■□□□□ 0.04
CTTN-208ENST00000498223 MRS2Q9HD23 443 aa15.32■□□□□ 0.04
CTTN-208ENST00000498223 CRB1P82279 1406 aa15.32■□□□□ 0.04
CTTN-208ENST00000498223 KRT27Q7Z3Y8 459 aa15.31■□□□□ 0.04
CTTN-208ENST00000498223 MIER1Q8N108 512 aa15.31■□□□□ 0.04
CTTN-208ENST00000498223 FAM98CQ17RN3 349 aaKnown RBP15.3■□□□□ 0.04
CTTN-208ENST00000498223 USHBP1Q8N6Y0 703 aa15.3■□□□□ 0.04
CTTN-208ENST00000498223 WNK3Q9BYP7 1800 aa15.3■□□□□ 0.04
CTTN-208ENST00000498223 COL3A1P02461 1466 aaPredicted RBP15.29■□□□□ 0.04
CTTN-208ENST00000498223 SPATA31A5Q5VU36 1347 aa15.29■□□□□ 0.04
CTTN-208ENST00000498223 SPATA31A7Q8IWB4 1347 aa15.29■□□□□ 0.04
CTTN-208ENST00000498223 A0A0G2JS52 829 aa15.29■□□□□ 0.04
CTTN-208ENST00000498223 IL13P35225 146 aa15.29■□□□□ 0.04
CTTN-208ENST00000498223 MYT1Q01538 1121 aa15.29■□□□□ 0.04
CTTN-208ENST00000498223 WDR43Q15061 677 aaKnown RBP eCLIP15.29■□□□□ 0.04
CTTN-208ENST00000498223 KAT6BQ8WYB5 2073 aa15.29■□□□□ 0.04
CTTN-208ENST00000498223 U2AF1L5P0DN76 240 aaPredicted RBP15.28■□□□□ 0.04
CTTN-208ENST00000498223 U2AF1Q01081 240 aaKnown RBP eCLIP15.28■□□□□ 0.04
CTTN-208ENST00000498223 SF3B2Q13435 895 aaKnown RBP15.28■□□□□ 0.04
CTTN-208ENST00000498223 NBPF6Q5VWK0 638 aa15.28■□□□□ 0.04
CTTN-208ENST00000498223 NBPF4Q96M43 638 aa15.28■□□□□ 0.04
CTTN-208ENST00000498223 EYA1Q99502 592 aa15.28■□□□□ 0.04
CTTN-208ENST00000498223 CARD10Q9BWT7 1032 aa15.28■□□□□ 0.04
CTTN-208ENST00000498223 RGPD1P0DJD0 1748 aa15.28■□□□□ 0.04
CTTN-208ENST00000498223 PARP4Q9UKK3 1724 aaKnown RBP15.27■□□□□ 0.04
CTTN-208ENST00000498223 CCDC184Q52MB2 194 aa15.27■□□□□ 0.04
CTTN-208ENST00000498223 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.04
CTTN-208ENST00000498223 SPATA31A1Q5TZJ5 1347 aa15.26■□□□□ 0.03
CTTN-208ENST00000498223 HMOX1P09601 288 aa15.26■□□□□ 0.03
CTTN-208ENST00000498223 SULT6B1Q6IMI4 303 aa15.26■□□□□ 0.03
CTTN-208ENST00000498223 RAPGEF4Q8WZA2 1011 aa15.25■□□□□ 0.03
CTTN-208ENST00000498223 SRCAPQ6ZRS2 3230 aa15.24■□□□□ 0.03
CTTN-208ENST00000498223 BRWD3Q6RI45 1802 aa15.24■□□□□ 0.03
CTTN-208ENST00000498223 IGSF1Q8N6C5 1336 aa15.24■□□□□ 0.03
CTTN-208ENST00000498223 CCER2I3L3R5 266 aa15.24■□□□□ 0.03
CTTN-208ENST00000498223 TATP17735 454 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms