RNA–Protein interactions for RNA: ENST00000498039.5

RNF6-207, Transcript of ring finger protein 6, humanhuman

TSL 3

Gene RNF6, Length 855 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-207ENST00000498039 ERCC6Q03468 1493 aa8.52□□□□□ -1.05
RNF6-207ENST00000498039 PROCA1Q8NCQ7 364 aaPredicted RBP8.52□□□□□ -1.05
RNF6-207ENST00000498039 UPP2O95045 317 aa8.51□□□□□ -1.05
RNF6-207ENST00000498039 GMPRP36959 345 aa8.51□□□□□ -1.05
RNF6-207ENST00000498039 SKIV2LQ15477 1246 aaKnown RBP8.51□□□□□ -1.05
RNF6-207ENST00000498039 SH3BP5LQ7L8J4 393 aa8.51□□□□□ -1.05
RNF6-207ENST00000498039 SH3RF1Q7Z6J0 888 aa8.51□□□□□ -1.05
RNF6-207ENST00000498039 NPAS3Q8IXF0 933 aa8.51□□□□□ -1.05
RNF6-207ENST00000498039 PCMTD1Q96MG8 357 aaPredicted RBP8.51□□□□□ -1.05
RNF6-207ENST00000498039 C1QTNF2Q9BXJ5 285 aa8.51□□□□□ -1.05
RNF6-207ENST00000498039 H3BM21 787 aa8.5□□□□□ -1.05
RNF6-207ENST00000498039 MAN1A2O60476 641 aa8.5□□□□□ -1.05
RNF6-207ENST00000498039 BMP2P12643 396 aa8.5□□□□□ -1.05
RNF6-207ENST00000498039 C14orf37Q86TY3 774 aa8.5□□□□□ -1.05
RNF6-207ENST00000498039 LRRN4Q8WUT4 740 aa8.5□□□□□ -1.05
RNF6-207ENST00000498039 SCRIBQ14160 1630 aa8.49□□□□□ -1.05
RNF6-207ENST00000498039 TRMT44Q8IYL2 757 aaKnown RBP8.48□□□□□ -1.05
RNF6-207ENST00000498039 LINC00528Q8N1L1 170 aa8.48□□□□□ -1.05
RNF6-207ENST00000498039 GPKOWQ92917 476 aaPredicted RBP eCLIP8.48□□□□□ -1.05
RNF6-207ENST00000498039 MAP4K5Q9Y4K4 846 aa8.48□□□□□ -1.05
RNF6-207ENST00000498039 ERFEQ4G0M1 354 aa8.47□□□□□ -1.05
RNF6-207ENST00000498039 FBXO31Q5XUX0 539 aaPredicted RBP8.47□□□□□ -1.05
RNF6-207ENST00000498039 CCDC116Q8IYX3 515 aa8.47□□□□□ -1.05
RNF6-207ENST00000498039 MEIOBQ8N635 442 aa8.47□□□□□ -1.05
RNF6-207ENST00000498039 ARHGAP9Q9BRR9 750 aa8.47□□□□□ -1.05
RNF6-207ENST00000498039 ERBB4Q15303 1308 aa8.47□□□□□ -1.05
RNF6-207ENST00000498039 FKBPLQ9UIM3 349 aa8.46□□□□□ -1.06
RNF6-207ENST00000498039 EMILIN1Q9Y6C2 1016 aa8.46□□□□□ -1.06
RNF6-207ENST00000498039 AP1G2O75843 785 aa8.45□□□□□ -1.06
RNF6-207ENST00000498039 NR6A1Q15406 480 aa8.45□□□□□ -1.06
RNF6-207ENST00000498039 ZBTB33Q86T24 672 aa8.45□□□□□ -1.06
RNF6-207ENST00000498039 SLC10A4Q96EP9 437 aa8.45□□□□□ -1.06
RNF6-207ENST00000498039 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.45□□□□□ -1.06
RNF6-207ENST00000498039 PDXDC2PQ6P474 469 aa8.44□□□□□ -1.06
RNF6-207ENST00000498039 FAM181BA6NEQ2 426 aa8.43□□□□□ -1.06
RNF6-207ENST00000498039 ZSCAN1Q8NBB4 408 aa8.43□□□□□ -1.06
RNF6-207ENST00000498039 TSEN34Q9BSV6 310 aaKnown RBP8.43□□□□□ -1.06
RNF6-207ENST00000498039 PPP1R26Q5T8A7 1209 aaPredicted RBP8.42□□□□□ -1.06
RNF6-207ENST00000498039 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
RNF6-207ENST00000498039 CBLBQ13191 982 aa8.41□□□□□ -1.06
RNF6-207ENST00000498039 KCTD15Q96SI1 283 aaPredicted RBP8.41□□□□□ -1.06
RNF6-207ENST00000498039 DNMT3LQ9UJW3 386 aa8.41□□□□□ -1.06
RNF6-207ENST00000498039 SOS2Q07890 1332 aaPredicted RBP8.4□□□□□ -1.06
RNF6-207ENST00000498039 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
RNF6-207ENST00000498039 PTK2Q05397 1052 aa8.4□□□□□ -1.06
RNF6-207ENST00000498039 PPP2R2DQ66LE6 453 aa8.4□□□□□ -1.06
RNF6-207ENST00000498039 ERICH6Q7L0X2 663 aa8.4□□□□□ -1.06
RNF6-207ENST00000498039 THOC2Q8NI27 1593 aaKnown RBP8.39□□□□□ -1.07
RNF6-207ENST00000498039 PPFIA3O75145 1194 aa8.39□□□□□ -1.07
RNF6-207ENST00000498039 CDV3Q9UKY7 258 aaKnown RBP8.39□□□□□ -1.07
RNF6-207ENST00000498039 FIGNL2A6NMB9 653 aa8.38□□□□□ -1.07
RNF6-207ENST00000498039 TTLL8A6PVC2 850 aa8.38□□□□□ -1.07
RNF6-207ENST00000498039 USP17L8P0C7I0 530 aa8.38□□□□□ -1.07
RNF6-207ENST00000498039 RAB15P59190 212 aa8.38□□□□□ -1.07
RNF6-207ENST00000498039 PNMA1Q8ND90 353 aa8.38□□□□□ -1.07
RNF6-207ENST00000498039 ADAM32Q8TC27 787 aa8.38□□□□□ -1.07
RNF6-207ENST00000498039 EPS8L1Q8TE68 723 aa8.38□□□□□ -1.07
RNF6-207ENST00000498039 RFC5P40937 340 aa8.37□□□□□ -1.07
RNF6-207ENST00000498039 DHX9Q08211 1270 aaKnown RBP8.37□□□□□ -1.07
RNF6-207ENST00000498039 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.37□□□□□ -1.07
RNF6-207ENST00000498039 INTS6LQ5JSJ4 861 aaKnown RBP8.37□□□□□ -1.07
RNF6-207ENST00000498039 HMX1Q9NP08 348 aaPredicted RBP8.37□□□□□ -1.07
RNF6-207ENST00000498039 VSIG8P0DPA2 414 aa8.36□□□□□ -1.07
RNF6-207ENST00000498039 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
RNF6-207ENST00000498039 OCSTAMPQ9BR26 566 aa8.36□□□□□ -1.07
RNF6-207ENST00000498039 RELBQ01201 579 aa8.35□□□□□ -1.07
RNF6-207ENST00000498039 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
RNF6-207ENST00000498039 GPSM3Q9Y4H4 160 aa8.35□□□□□ -1.07
RNF6-207ENST00000498039 NESP48681 1621 aa8.34□□□□□ -1.07
RNF6-207ENST00000498039 FLIIQ13045 1269 aa8.34□□□□□ -1.07
RNF6-207ENST00000498039 NBPF20Q3BBV1 942 aa8.34□□□□□ -1.07
RNF6-207ENST00000498039 Q6ZVU0 165 aa8.34□□□□□ -1.07
RNF6-207ENST00000498039 DZIP3Q86Y13 1208 aaKnown RBP8.34□□□□□ -1.07
RNF6-207ENST00000498039 SPINT1O43278 529 aa8.33□□□□□ -1.08
RNF6-207ENST00000498039 PTSQ03393 145 aa8.33□□□□□ -1.08
RNF6-207ENST00000498039 MCM6Q14566 821 aa8.33□□□□□ -1.08
RNF6-207ENST00000498039 ZMYND15Q9H091 742 aa8.33□□□□□ -1.08
RNF6-207ENST00000498039 TMPRSS4Q9NRS4 437 aa8.33□□□□□ -1.08
RNF6-207ENST00000498039 POLMQ9NP87 494 aaPredicted RBP8.32□□□□□ -1.08
RNF6-207ENST00000498039 SNRKQ9NRH2 765 aa8.32□□□□□ -1.08
RNF6-207ENST00000498039 SUPT5HO00267 1087 aaKnown RBP8.31□□□□□ -1.08
RNF6-207ENST00000498039 INSM2Q96T92 566 aaPredicted RBP8.31□□□□□ -1.08
RNF6-207ENST00000498039 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
RNF6-207ENST00000498039 CTSOP43234 321 aaPredicted RBP8.3□□□□□ -1.08
RNF6-207ENST00000498039 ZNF784Q8NCA9 323 aaPredicted RBP8.3□□□□□ -1.08
RNF6-207ENST00000498039 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
RNF6-207ENST00000498039 TMEM259Q4ZIN3 620 aa8.29□□□□□ -1.08
RNF6-207ENST00000498039 CCDC155Q8N6L0 562 aa8.29□□□□□ -1.08
RNF6-207ENST00000498039 CLUAP1Q96AJ1 413 aa8.29□□□□□ -1.08
RNF6-207ENST00000498039 BANK1Q8NDB2 785 aa8.28□□□□□ -1.08
RNF6-207ENST00000498039 CNTNAP3BQ96NU0 1288 aa8.28□□□□□ -1.08
RNF6-207ENST00000498039 CNTNAP3Q9BZ76 1288 aa8.28□□□□□ -1.08
RNF6-207ENST00000498039 KIF21AQ7Z4S6 1674 aa8.27□□□□□ -1.08
RNF6-207ENST00000498039 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
RNF6-207ENST00000498039 ADH1AP07327 375 aa8.27□□□□□ -1.09
RNF6-207ENST00000498039 GPR161Q8N6U8 529 aaKnown RBP8.27□□□□□ -1.09
RNF6-207ENST00000498039 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
RNF6-207ENST00000498039 TRIM34Q9BYJ4 488 aa8.27□□□□□ -1.09
RNF6-207ENST00000498039 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
RNF6-207ENST00000498039 SMARCA2P51531 1590 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms