RNA–Protein interactions for RNA: ENST00000498039.5

RNF6-207, Transcript of ring finger protein 6, humanhuman

TSL 3

Gene RNF6, Length 855 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-207ENST00000498039 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
RNF6-207ENST00000498039 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
RNF6-207ENST00000498039 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
RNF6-207ENST00000498039 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
RNF6-207ENST00000498039 FOXD1Q16676 465 aa19.27■□□□□ 0.68
RNF6-207ENST00000498039 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
RNF6-207ENST00000498039 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
RNF6-207ENST00000498039 ADRA2BP18089 450 aa18.09■□□□□ 0.49
RNF6-207ENST00000498039 PIAS4Q8N2W9 510 aaPredicted RBP18.09■□□□□ 0.49
RNF6-207ENST00000498039 MSH5O43196 834 aa18■□□□□ 0.47
RNF6-207ENST00000498039 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
RNF6-207ENST00000498039 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
RNF6-207ENST00000498039 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
RNF6-207ENST00000498039 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
RNF6-207ENST00000498039 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
RNF6-207ENST00000498039 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
RNF6-207ENST00000498039 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
RNF6-207ENST00000498039 HOXD11P31277 338 aaPredicted RBP15.83■□□□□ 0.12
RNF6-207ENST00000498039 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
RNF6-207ENST00000498039 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
RNF6-207ENST00000498039 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
RNF6-207ENST00000498039 CACNB1Q02641 598 aaPredicted RBP15.43■□□□□ 0.06
RNF6-207ENST00000498039 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
RNF6-207ENST00000498039 KCNA4P22459 653 aa15.31■□□□□ 0.04
RNF6-207ENST00000498039 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
RNF6-207ENST00000498039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
RNF6-207ENST00000498039 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
RNF6-207ENST00000498039 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
RNF6-207ENST00000498039 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
RNF6-207ENST00000498039 CAPN15O75808 1086 aa14.62□□□□□ -0.07
RNF6-207ENST00000498039 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
RNF6-207ENST00000498039 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
RNF6-207ENST00000498039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.46□□□□□ -0.09
RNF6-207ENST00000498039 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.09
RNF6-207ENST00000498039 APLP2Q06481 763 aa14.45□□□□□ -0.1
RNF6-207ENST00000498039 DSG3P32926 999 aa14.42□□□□□ -0.1
RNF6-207ENST00000498039 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
RNF6-207ENST00000498039 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
RNF6-207ENST00000498039 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
RNF6-207ENST00000498039 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
RNF6-207ENST00000498039 ABCB7O75027 752 aa14.29□□□□□ -0.12
RNF6-207ENST00000498039 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
RNF6-207ENST00000498039 ZBTB22O15209 634 aa14.05□□□□□ -0.16
RNF6-207ENST00000498039 POLA2Q14181 598 aa14.01□□□□□ -0.17
RNF6-207ENST00000498039 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
RNF6-207ENST00000498039 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
RNF6-207ENST00000498039 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
RNF6-207ENST00000498039 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
RNF6-207ENST00000498039 POTEHQ6S545 545 aa13.65□□□□□ -0.22
RNF6-207ENST00000498039 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
RNF6-207ENST00000498039 CSRNP3Q8WYN3 585 aa13.51□□□□□ -0.25
RNF6-207ENST00000498039 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
RNF6-207ENST00000498039 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
RNF6-207ENST00000498039 FBLN2P98095 1184 aa13.47□□□□□ -0.25
RNF6-207ENST00000498039 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
RNF6-207ENST00000498039 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
RNF6-207ENST00000498039 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
RNF6-207ENST00000498039 SPDYE2BA6NHP3 402 aa13.3□□□□□ -0.28
RNF6-207ENST00000498039 SPDYE6P0CI01 402 aa13.3□□□□□ -0.28
RNF6-207ENST00000498039 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
RNF6-207ENST00000498039 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
RNF6-207ENST00000498039 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
RNF6-207ENST00000498039 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
RNF6-207ENST00000498039 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
RNF6-207ENST00000498039 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
RNF6-207ENST00000498039 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
RNF6-207ENST00000498039 FXR2P51116 673 aaKnown RBP eCLIP13.05□□□□□ -0.32
RNF6-207ENST00000498039 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
RNF6-207ENST00000498039 HAX1O00165 279 aa12.92□□□□□ -0.34
RNF6-207ENST00000498039 PRKAR2AP13861 404 aaKnown RBP12.91□□□□□ -0.34
RNF6-207ENST00000498039 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
RNF6-207ENST00000498039 SP7Q8TDD2 431 aaPredicted RBP12.85□□□□□ -0.35
RNF6-207ENST00000498039 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
RNF6-207ENST00000498039 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
RNF6-207ENST00000498039 EVX2Q03828 476 aa12.71□□□□□ -0.37
RNF6-207ENST00000498039 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
RNF6-207ENST00000498039 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
RNF6-207ENST00000498039 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
RNF6-207ENST00000498039 CREBZFQ9NS37 354 aa12.52□□□□□ -0.41
RNF6-207ENST00000498039 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
RNF6-207ENST00000498039 GABBR2O75899 941 aa12.44□□□□□ -0.42
RNF6-207ENST00000498039 PROM2Q8N271 834 aa12.41□□□□□ -0.42
RNF6-207ENST00000498039 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
RNF6-207ENST00000498039 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
RNF6-207ENST00000498039 FKBP8Q14318 412 aa12.31□□□□□ -0.44
RNF6-207ENST00000498039 PAK3O75914 559 aaPredicted RBP12.3□□□□□ -0.44
RNF6-207ENST00000498039 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
RNF6-207ENST00000498039 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
RNF6-207ENST00000498039 CLCN6P51797 869 aa12.24□□□□□ -0.45
RNF6-207ENST00000498039 MIER1Q8N108 512 aa12.24□□□□□ -0.45
RNF6-207ENST00000498039 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
RNF6-207ENST00000498039 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
RNF6-207ENST00000498039 DCBLD2Q96PD2 775 aa12.18□□□□□ -0.46
RNF6-207ENST00000498039 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
RNF6-207ENST00000498039 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
RNF6-207ENST00000498039 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
RNF6-207ENST00000498039 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
RNF6-207ENST00000498039 LHX8Q68G74 356 aa12.07□□□□□ -0.48
RNF6-207ENST00000498039 ZBTB47Q9UFB7 747 aaPredicted RBP12.03□□□□□ -0.48
RNF6-207ENST00000498039 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms