RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 RTL1A6NKG5 1358 aa32.4■■■□□ 2.78
TNFRSF4-203ENST00000497869 ABCA3Q99758 1704 aa32.39■■■□□ 2.78
TNFRSF4-203ENST00000497869 KIAA0232Q92628 1395 aa32.39■■■□□ 2.78
TNFRSF4-203ENST00000497869 U2SURPO15042 1029 aaKnown RBP32.37■■■□□ 2.77
TNFRSF4-203ENST00000497869 BLMP54132 1417 aaPredicted RBP32.37■■■□□ 2.77
TNFRSF4-203ENST00000497869 CPDO75976 1380 aa32.37■■■□□ 2.77
TNFRSF4-203ENST00000497869 U2AF1L5P0DN76 240 aaPredicted RBP32.37■■■□□ 2.77
TNFRSF4-203ENST00000497869 U2AF1Q01081 240 aaKnown RBP eCLIP32.37■■■□□ 2.77
TNFRSF4-203ENST00000497869 COL22A1Q8NFW1 1626 aaPredicted RBP32.37■■■□□ 2.77
TNFRSF4-203ENST00000497869 CHRNA2Q15822 529 aa32.36■■■□□ 2.77
TNFRSF4-203ENST00000497869 CCDC146Q8IYE0 955 aa32.34■■■□□ 2.77
TNFRSF4-203ENST00000497869 NUDCQ9Y266 331 aa32.34■■■□□ 2.77
TNFRSF4-203ENST00000497869 HSPA1LP34931 641 aa32.32■■■□□ 2.76
TNFRSF4-203ENST00000497869 LTV1Q96GA3 475 aaPredicted RBP32.32■■■□□ 2.76
TNFRSF4-203ENST00000497869 COL18A1P39060 1754 aa32.32■■■□□ 2.76
TNFRSF4-203ENST00000497869 HNRNPUQ00839 825 aaKnown RBP eCLIP32.31■■■□□ 2.76
TNFRSF4-203ENST00000497869 HMOX1P09601 288 aa32.29■■■□□ 2.76
TNFRSF4-203ENST00000497869 HAP1P54257 671 aaPredicted RBP32.29■■■□□ 2.76
TNFRSF4-203ENST00000497869 AEBP1Q8IUX7 1158 aa32.29■■■□□ 2.76
TNFRSF4-203ENST00000497869 EYA1Q99502 592 aa32.29■■■□□ 2.76
TNFRSF4-203ENST00000497869 RGPD1P0DJD0 1748 aa32.28■■■□□ 2.76
TNFRSF4-203ENST00000497869 FAM83GA6ND36 823 aa32.27■■■□□ 2.76
TNFRSF4-203ENST00000497869 PLEKHF1Q96S99 279 aa32.27■■■□□ 2.76
TNFRSF4-203ENST00000497869 RSPH6AQ9H0K4 717 aa32.27■■■□□ 2.76
TNFRSF4-203ENST00000497869 PRDM11Q9NQV5 511 aa32.26■■■□□ 2.76
TNFRSF4-203ENST00000497869 ANKRD24Q8TF21 1146 aa32.25■■■□□ 2.75
TNFRSF4-203ENST00000497869 IGSF1Q8N6C5 1336 aa32.24■■■□□ 2.75
TNFRSF4-203ENST00000497869 CAMTA1Q9Y6Y1 1673 aa32.23■■■□□ 2.75
TNFRSF4-203ENST00000497869 JCADQ9P266 1359 aa32.23■■■□□ 2.75
TNFRSF4-203ENST00000497869 ERBB3P21860 1342 aa32.23■■■□□ 2.75
TNFRSF4-203ENST00000497869 NBPF6Q5VWK0 638 aa32.23■■■□□ 2.75
TNFRSF4-203ENST00000497869 NBPF4Q96M43 638 aa32.23■■■□□ 2.75
TNFRSF4-203ENST00000497869 SULT6B1Q6IMI4 303 aa32.22■■■□□ 2.75
TNFRSF4-203ENST00000497869 LMO7Q8WWI1 1683 aa32.22■■■□□ 2.75
TNFRSF4-203ENST00000497869 FCHSD2O94868 740 aa32.21■■■□□ 2.75
TNFRSF4-203ENST00000497869 RGPD5Q99666 1765 aa32.21■■■□□ 2.75
TNFRSF4-203ENST00000497869 APAF1O14727 1248 aa32.2■■■□□ 2.75
TNFRSF4-203ENST00000497869 RUNDC1Q96C34 613 aa32.2■■■□□ 2.75
TNFRSF4-203ENST00000497869 ABCC6O95255 1503 aa32.2■■■□□ 2.75
TNFRSF4-203ENST00000497869 PRKAR2BP31323 418 aa32.2■■■□□ 2.74
TNFRSF4-203ENST00000497869 USHBP1Q8N6Y0 703 aa32.2■■■□□ 2.74
TNFRSF4-203ENST00000497869 NUTM2BA6NNL0 878 aaPredicted RBP32.19■■■□□ 2.74
TNFRSF4-203ENST00000497869 NUTM2EB1AL46 878 aaPredicted RBP32.19■■■□□ 2.74
TNFRSF4-203ENST00000497869 NUTM2AQ8IVF1 878 aaPredicted RBP32.19■■■□□ 2.74
TNFRSF4-203ENST00000497869 PHACTR3Q96KR7 559 aa32.18■■■□□ 2.74
TNFRSF4-203ENST00000497869 ADAMTS2O95450 1211 aa32.17■■■□□ 2.74
TNFRSF4-203ENST00000497869 SALL2Q9Y467 1007 aaPredicted RBP32.17■■■□□ 2.74
TNFRSF4-203ENST00000497869 KDRP35968 1356 aa32.17■■■□□ 2.74
TNFRSF4-203ENST00000497869 TCP11L2Q8N4U5 519 aa32.14■■■□□ 2.74
TNFRSF4-203ENST00000497869 COL5A2P05997 1499 aaPredicted RBP32.14■■■□□ 2.74
TNFRSF4-203ENST00000497869 RGPD2P0DJD1 1756 aa32.13■■■□□ 2.73
TNFRSF4-203ENST00000497869 RRP7AQ9Y3A4 280 aaKnown RBP32.13■■■□□ 2.73
TNFRSF4-203ENST00000497869 NCAPD2Q15021 1401 aa32.13■■■□□ 2.73
TNFRSF4-203ENST00000497869 ZBED9Q6R2W3 1325 aa32.12■■■□□ 2.73
TNFRSF4-203ENST00000497869 LRP6O75581 1613 aa32.11■■■□□ 2.73
TNFRSF4-203ENST00000497869 BTG4Q9NY30 223 aa32.1■■■□□ 2.73
TNFRSF4-203ENST00000497869 COL14A1Q05707 1796 aaKnown RBP32.07■■■□□ 2.72
TNFRSF4-203ENST00000497869 CSB-PGBD3P0DP91 1061 aa32.06■■■□□ 2.72
TNFRSF4-203ENST00000497869 NLRP2Q9NX02 1062 aa32.06■■■□□ 2.72
TNFRSF4-203ENST00000497869 SPATA31A6Q5VVP1 1343 aa32.06■■■□□ 2.72
TNFRSF4-203ENST00000497869 WDR17Q8IZU2 1322 aa32.06■■■□□ 2.72
TNFRSF4-203ENST00000497869 TMPOP42166 694 aaKnown RBP32.06■■■□□ 2.72
TNFRSF4-203ENST00000497869 NEUROD2Q15784 382 aa32.06■■■□□ 2.72
TNFRSF4-203ENST00000497869 LARP1Q6PKG0 1096 aaKnown RBP32.06■■■□□ 2.72
TNFRSF4-203ENST00000497869 STRN4Q9NRL3 753 aa32.06■■■□□ 2.72
TNFRSF4-203ENST00000497869 MAPK8IP3Q9UPT6 1336 aa32.05■■■□□ 2.72
TNFRSF4-203ENST00000497869 ZNF521Q96K83 1311 aa32.04■■■□□ 2.72
TNFRSF4-203ENST00000497869 PNNQ9H307 717 aaKnown RBP32.04■■■□□ 2.72
TNFRSF4-203ENST00000497869 FAM208AQ9UK61 1670 aaKnown RBP32.03■■■□□ 2.72
TNFRSF4-203ENST00000497869 PHF23Q9BUL5 403 aaPredicted RBP32.03■■■□□ 2.72
TNFRSF4-203ENST00000497869 TRIM35Q9UPQ4 493 aa32■■■□□ 2.71
TNFRSF4-203ENST00000497869 SLIT2O94813 1529 aa31.99■■■□□ 2.71
TNFRSF4-203ENST00000497869 EVA1CP58658 441 aa31.99■■■□□ 2.71
TNFRSF4-203ENST00000497869 NFE2L2Q16236 605 aa31.99■■■□□ 2.71
TNFRSF4-203ENST00000497869 MTHFSDQ2M296 383 aaKnown RBP31.99■■■□□ 2.71
TNFRSF4-203ENST00000497869 TOM1L2Q6ZVM7 507 aa31.98■■■□□ 2.71
TNFRSF4-203ENST00000497869 PLCH1Q4KWH8 1693 aa31.98■■■□□ 2.71
TNFRSF4-203ENST00000497869 RIPK4P57078 832 aa31.97■■■□□ 2.71
TNFRSF4-203ENST00000497869 WWC1Q8IX03 1113 aa31.97■■■□□ 2.71
TNFRSF4-203ENST00000497869 C8orf37Q96NL8 207 aa31.96■■■□□ 2.71
TNFRSF4-203ENST00000497869 CDCA7LQ96GN5 454 aa31.95■■■□□ 2.71
TNFRSF4-203ENST00000497869 CARD10Q9BWT7 1032 aa31.95■■■□□ 2.71
TNFRSF4-203ENST00000497869 MEGF6O75095 1541 aa31.95■■■□□ 2.7
TNFRSF4-203ENST00000497869 NRAPQ86VF7 1730 aa31.93■■■□□ 2.7
TNFRSF4-203ENST00000497869 CCDC27Q2M243 656 aa31.93■■■□□ 2.7
TNFRSF4-203ENST00000497869 FBXO41Q8TF61 875 aa31.93■■■□□ 2.7
TNFRSF4-203ENST00000497869 CRB1P82279 1406 aa31.93■■■□□ 2.7
TNFRSF4-203ENST00000497869 NEFMP07197 916 aa31.92■■■□□ 2.7
TNFRSF4-203ENST00000497869 NCBP3Q53F19 620 aaKnown RBP31.92■■■□□ 2.7
TNFRSF4-203ENST00000497869 SPINK5Q9NQ38 1064 aaPredicted RBP31.92■■■□□ 2.7
TNFRSF4-203ENST00000497869 NGEFQ8N5V2 710 aa31.91■■■□□ 2.7
TNFRSF4-203ENST00000497869 BCL9LQ86UU0 1499 aa31.91■■■□□ 2.7
TNFRSF4-203ENST00000497869 FNBP4Q8N3X1 1017 aaPredicted RBP31.9■■■□□ 2.7
TNFRSF4-203ENST00000497869 NGLY1Q96IV0 654 aa31.9■■■□□ 2.7
TNFRSF4-203ENST00000497869 USP35Q9P2H5 1018 aa31.89■■■□□ 2.7
TNFRSF4-203ENST00000497869 THUMPD2Q9BTF0 503 aaKnown RBP31.88■■■□□ 2.69
TNFRSF4-203ENST00000497869 DCTN1Q14203 1278 aa31.86■■■□□ 2.69
TNFRSF4-203ENST00000497869 RAPGEF4Q8WZA2 1011 aa31.86■■■□□ 2.69
TNFRSF4-203ENST00000497869 NWD2Q9ULI1 1742 aa31.85■■■□□ 2.69
TNFRSF4-203ENST00000497869 UNC5CLQ8IV45 518 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms