RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 FAM98CQ17RN3 349 aaKnown RBP16.17■□□□□ 0.18
MRPL55-234ENST00000497758 LARP1Q6PKG0 1096 aaKnown RBP16.17■□□□□ 0.18
MRPL55-234ENST00000497758 PANK3Q9H999 370 aa16.17■□□□□ 0.18
MRPL55-234ENST00000497758 USP35Q9P2H5 1018 aa16.17■□□□□ 0.18
MRPL55-234ENST00000497758 SPATA31A1Q5TZJ5 1347 aa16.17■□□□□ 0.18
MRPL55-234ENST00000497758 CSB-PGBD3P0DP91 1061 aa16.16■□□□□ 0.18
MRPL55-234ENST00000497758 SEPT12Q8IYM1 358 aa16.16■□□□□ 0.18
MRPL55-234ENST00000497758 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
MRPL55-234ENST00000497758 ABCC6O95255 1503 aa16.14■□□□□ 0.18
MRPL55-234ENST00000497758 ONECUT3O60422 494 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-234ENST00000497758 TOM1L2Q6ZVM7 507 aa16.14■□□□□ 0.17
MRPL55-234ENST00000497758 TCP11L2Q8N4U5 519 aa16.14■□□□□ 0.17
MRPL55-234ENST00000497758 KIF20BQ96Q89 1820 aa16.14■□□□□ 0.17
MRPL55-234ENST00000497758 CRB1P82279 1406 aa16.13■□□□□ 0.17
MRPL55-234ENST00000497758 WDR17Q8IZU2 1322 aa16.13■□□□□ 0.17
MRPL55-234ENST00000497758 AMPHP49418 695 aa16.12■□□□□ 0.17
MRPL55-234ENST00000497758 COL18A1P39060 1754 aa16.12■□□□□ 0.17
MRPL55-234ENST00000497758 CCDC7Q96M83 1385 aa16.12■□□□□ 0.17
MRPL55-234ENST00000497758 LTN1O94822 1766 aa16.11■□□□□ 0.17
MRPL55-234ENST00000497758 EP400Q96L91 3159 aa16.11■□□□□ 0.17
MRPL55-234ENST00000497758 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
MRPL55-234ENST00000497758 THRAP3Q9Y2W1 955 aaKnown RBP16.11■□□□□ 0.17
MRPL55-234ENST00000497758 KNSTRNQ9Y448 316 aa16.11■□□□□ 0.17
MRPL55-234ENST00000497758 MAP3K19Q56UN5 1328 aa16.11■□□□□ 0.17
MRPL55-234ENST00000497758 FBLN1P23142 703 aa16.1■□□□□ 0.17
MRPL55-234ENST00000497758 RRS1Q15050 365 aaKnown RBP16.1■□□□□ 0.17
MRPL55-234ENST00000497758 KRT27Q7Z3Y8 459 aa16.1■□□□□ 0.17
MRPL55-234ENST00000497758 IP6K1Q92551 441 aa16.1■□□□□ 0.17
MRPL55-234ENST00000497758 BLMP54132 1417 aaPredicted RBP16.1■□□□□ 0.17
MRPL55-234ENST00000497758 ANKRD24Q8TF21 1146 aa16.09■□□□□ 0.17
MRPL55-234ENST00000497758 ERBB3P21860 1342 aa16.09■□□□□ 0.17
MRPL55-234ENST00000497758 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
MRPL55-234ENST00000497758 NSD2O96028 1365 aa16.09■□□□□ 0.17
MRPL55-234ENST00000497758 HOXC9P31274 260 aa16.08■□□□□ 0.16
MRPL55-234ENST00000497758 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-234ENST00000497758 UPF1Q92900 1129 aaKnown RBP eCLIP16.08■□□□□ 0.16
MRPL55-234ENST00000497758 CARD10Q9BWT7 1032 aa16.08■□□□□ 0.16
MRPL55-234ENST00000497758 NLRP2Q9NX02 1062 aa16.08■□□□□ 0.16
MRPL55-234ENST00000497758 RTL1A6NKG5 1358 aa16.08■□□□□ 0.16
MRPL55-234ENST00000497758 LTV1Q96GA3 475 aaPredicted RBP16.07■□□□□ 0.16
MRPL55-234ENST00000497758 THSD7AQ9UPZ6 1657 aa16.07■□□□□ 0.16
MRPL55-234ENST00000497758 RGPD5Q99666 1765 aa16.07■□□□□ 0.16
MRPL55-234ENST00000497758 TNNT2P45379 298 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-234ENST00000497758 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-234ENST00000497758 PDE3BQ13370 1112 aa16.05■□□□□ 0.16
MRPL55-234ENST00000497758 MORC1Q86VD1 984 aa16.05■□□□□ 0.16
MRPL55-234ENST00000497758 CDCA7Q9BWT1 371 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-234ENST00000497758 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
MRPL55-234ENST00000497758 SMG6Q86US8 1419 aaKnown RBP16.04■□□□□ 0.16
MRPL55-234ENST00000497758 FLT4P35916 1363 aa16.04■□□□□ 0.16
MRPL55-234ENST00000497758 KIF24Q5T7B8 1368 aa16.04■□□□□ 0.16
MRPL55-234ENST00000497758 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
MRPL55-234ENST00000497758 DDB1Q16531 1140 aa16.02■□□□□ 0.16
MRPL55-234ENST00000497758 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.15
MRPL55-234ENST00000497758 HSP90AB2PQ58FF8 381 aa16.01■□□□□ 0.15
MRPL55-234ENST00000497758 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-234ENST00000497758 CCDC125Q86Z20 511 aa16.01■□□□□ 0.15
MRPL55-234ENST00000497758 INSRP06213 1382 aa16■□□□□ 0.15
MRPL55-234ENST00000497758 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
MRPL55-234ENST00000497758 FAM182BQ5T319 152 aa16■□□□□ 0.15
MRPL55-234ENST00000497758 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
MRPL55-234ENST00000497758 PER1O15534 1290 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-234ENST00000497758 IL2RBP14784 551 aa15.99■□□□□ 0.15
MRPL55-234ENST00000497758 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
MRPL55-234ENST00000497758 FAM196AQ6ZSG2 479 aa15.99■□□□□ 0.15
MRPL55-234ENST00000497758 POLKQ9UBT6 870 aa15.99■□□□□ 0.15
MRPL55-234ENST00000497758 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
MRPL55-234ENST00000497758 DISP2A7MBM2 1401 aa15.98■□□□□ 0.15
MRPL55-234ENST00000497758 EXOC5O00471 708 aa15.98■□□□□ 0.15
MRPL55-234ENST00000497758 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-234ENST00000497758 PEAK1Q9H792 1746 aa15.98■□□□□ 0.15
MRPL55-234ENST00000497758 LRRC37A3O60309 1634 aa15.97■□□□□ 0.15
MRPL55-234ENST00000497758 WNK3Q9BYP7 1800 aa15.96■□□□□ 0.15
MRPL55-234ENST00000497758 TNS2Q63HR2 1409 aa15.95■□□□□ 0.14
MRPL55-234ENST00000497758 NBPF6Q5VWK0 638 aa15.95■□□□□ 0.14
MRPL55-234ENST00000497758 NBPF4Q96M43 638 aa15.95■□□□□ 0.14
MRPL55-234ENST00000497758 MAP2P11137 1827 aaKnown RBP15.95■□□□□ 0.14
MRPL55-234ENST00000497758 NPC1L1Q9UHC9 1359 aa15.95■□□□□ 0.14
MRPL55-234ENST00000497758 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
MRPL55-234ENST00000497758 USHBP1Q8N6Y0 703 aa15.94■□□□□ 0.14
MRPL55-234ENST00000497758 RAPGEF4Q8WZA2 1011 aa15.94■□□□□ 0.14
MRPL55-234ENST00000497758 TRIM37O94972 964 aa15.93■□□□□ 0.14
MRPL55-234ENST00000497758 MARCH10Q8NA82 808 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-234ENST00000497758 BAG6P46379 1132 aa15.91■□□□□ 0.14
MRPL55-234ENST00000497758 EIF4A2Q14240 407 aaKnown RBP15.91■□□□□ 0.14
MRPL55-234ENST00000497758 RGPD2P0DJD1 1756 aa15.9■□□□□ 0.14
MRPL55-234ENST00000497758 TATP17735 454 aaPredicted RBP15.9■□□□□ 0.14
MRPL55-234ENST00000497758 MEGF6O75095 1541 aa15.89■□□□□ 0.13
MRPL55-234ENST00000497758 MTHFSP49914 203 aa15.89■□□□□ 0.13
MRPL55-234ENST00000497758 DEFB132Q7Z7B7 95 aa15.89■□□□□ 0.13
MRPL55-234ENST00000497758 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
MRPL55-234ENST00000497758 DDX54Q8TDD1 881 aaKnown RBP15.89■□□□□ 0.13
MRPL55-234ENST00000497758 EYA1Q99502 592 aa15.89■□□□□ 0.13
MRPL55-234ENST00000497758 RGPD1P0DJD0 1748 aa15.88■□□□□ 0.13
MRPL55-234ENST00000497758 APBA3O96018 575 aa15.87■□□□□ 0.13
MRPL55-234ENST00000497758 BCL9O00512 1426 aa15.86■□□□□ 0.13
MRPL55-234ENST00000497758 DDX10Q13206 875 aaKnown RBP15.86■□□□□ 0.13
MRPL55-234ENST00000497758 EN1Q05925 392 aaPredicted RBP15.85■□□□□ 0.13
MRPL55-234ENST00000497758 BCL11BQ9C0K0 894 aaPredicted RBP15.85■□□□□ 0.13
MRPL55-234ENST00000497758 IGSF1Q8N6C5 1336 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms