RNA–Protein interactions for RNA: ENST00000497393.1

GTF2E1-205, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 1 (best)

Gene GTF2E1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-205ENST00000497393 SLC10A4Q96EP9 437 aa7.48□□□□□ -1.21
GTF2E1-205ENST00000497393 CCDC85AQ96PX6 553 aaPredicted RBP7.48□□□□□ -1.21
GTF2E1-205ENST00000497393 VRTNQ9H8Y1 702 aa7.48□□□□□ -1.21
GTF2E1-205ENST00000497393 GIGYF1O75420 1035 aaPredicted RBP7.47□□□□□ -1.21
GTF2E1-205ENST00000497393 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
GTF2E1-205ENST00000497393 SKOR1P84550 965 aa7.47□□□□□ -1.21
GTF2E1-205ENST00000497393 PPP1R18Q6NYC8 613 aa7.47□□□□□ -1.21
GTF2E1-205ENST00000497393 CHIC2Q9UKJ5 165 aa7.47□□□□□ -1.21
GTF2E1-205ENST00000497393 ZMIZ1Q9ULJ6 1067 aa7.47□□□□□ -1.21
GTF2E1-205ENST00000497393 ZBTB24O43167 697 aaPredicted RBP7.46□□□□□ -1.22
GTF2E1-205ENST00000497393 CRTC2Q53ET0 693 aaPredicted RBP7.46□□□□□ -1.22
GTF2E1-205ENST00000497393 TRAF7Q6Q0C0 670 aa7.46□□□□□ -1.22
GTF2E1-205ENST00000497393 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
GTF2E1-205ENST00000497393 STK32AQ8WU08 396 aa7.46□□□□□ -1.22
GTF2E1-205ENST00000497393 USTQ9Y2C2 406 aa7.46□□□□□ -1.22
GTF2E1-205ENST00000497393 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
GTF2E1-205ENST00000497393 GGCXP38435 758 aa7.45□□□□□ -1.22
GTF2E1-205ENST00000497393 OXLD1Q5BKU9 147 aa7.45□□□□□ -1.22
GTF2E1-205ENST00000497393 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.45□□□□□ -1.22
GTF2E1-205ENST00000497393 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
GTF2E1-205ENST00000497393 DOLKQ9UPQ8 538 aa7.45□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L12C9JPN9 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L21D6R901 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 TRMT44Q8IYL2 757 aaKnown RBP7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 EMID1Q96A84 441 aaPredicted RBP7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 NOVA2Q9UNW9 492 aaKnown RBP7.44□□□□□ -1.22
GTF2E1-205ENST00000497393 ZBTB7CA1YPR0 619 aa7.43□□□□□ -1.22
GTF2E1-205ENST00000497393 ESPNB1AK53 854 aa7.43□□□□□ -1.22
GTF2E1-205ENST00000497393 RAB15P59190 212 aa7.43□□□□□ -1.22
GTF2E1-205ENST00000497393 EML3Q32P44 896 aa7.43□□□□□ -1.22
GTF2E1-205ENST00000497393 NBPF20Q3BBV1 942 aa7.43□□□□□ -1.22
GTF2E1-205ENST00000497393 TMEM164Q5U3C3 297 aa7.43□□□□□ -1.22
GTF2E1-205ENST00000497393 CDCA7Q9BWT1 371 aaPredicted RBP7.43□□□□□ -1.22
GTF2E1-205ENST00000497393 FAM196BA6NMK8 535 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 RASA1P20936 1047 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 WNT7BP56706 349 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 CLDN10P78369 228 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 MMRN1Q13201 1228 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 PTK7Q13308 1070 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 MAP7D1Q3KQU3 841 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 LIAT1Q6ZQX7 453 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 KCTD17Q8N5Z5 321 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 KIAA1024Q9UPX6 916 aa7.42□□□□□ -1.22
GTF2E1-205ENST00000497393 ELOAQ14241 798 aaKnown RBP7.41□□□□□ -1.22
GTF2E1-205ENST00000497393 INTS6LQ5JSJ4 861 aaKnown RBP7.41□□□□□ -1.22
GTF2E1-205ENST00000497393 OGFOD1Q8N543 542 aa7.41□□□□□ -1.22
GTF2E1-205ENST00000497393 ZNF594Q96JF6 807 aaPredicted RBP7.41□□□□□ -1.22
GTF2E1-205ENST00000497393 PCDHB11Q9Y5F2 797 aa7.41□□□□□ -1.22
GTF2E1-205ENST00000497393 TLL2Q9Y6L7 1015 aa7.41□□□□□ -1.22
GTF2E1-205ENST00000497393 ATP5J2-PTCD1G3V325 749 aa7.4□□□□□ -1.22
GTF2E1-205ENST00000497393 RPIAP49247 311 aa7.4□□□□□ -1.22
GTF2E1-205ENST00000497393 LARP1Q6PKG0 1096 aaKnown RBP7.4□□□□□ -1.22
GTF2E1-205ENST00000497393 EHBP1Q8NDI1 1231 aa7.4□□□□□ -1.22
GTF2E1-205ENST00000497393 KCTD15Q96SI1 283 aaPredicted RBP7.4□□□□□ -1.22
GTF2E1-205ENST00000497393 VARSP26640 1264 aaKnown RBP7.39□□□□□ -1.23
GTF2E1-205ENST00000497393 GTF2IP78347 998 aa7.39□□□□□ -1.23
GTF2E1-205ENST00000497393 PDE4CQ08493 712 aa7.39□□□□□ -1.23
GTF2E1-205ENST00000497393 RC3H1Q5TC82 1133 aaKnown RBP7.39□□□□□ -1.23
GTF2E1-205ENST00000497393 RNF20Q5VTR2 975 aa7.39□□□□□ -1.23
GTF2E1-205ENST00000497393 VASH1Q7L8A9 365 aaPredicted RBP7.39□□□□□ -1.23
GTF2E1-205ENST00000497393 CDV3Q9UKY7 258 aaKnown RBP7.39□□□□□ -1.23
GTF2E1-205ENST00000497393 NOD1Q9Y239 953 aa7.39□□□□□ -1.23
GTF2E1-205ENST00000497393 LZTS3O60299 673 aaPredicted RBP7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 FSHRP23945 695 aa7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 DPYDQ12882 1025 aa7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 ARID5BQ14865 1188 aa7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 ANKMY2Q8IV38 441 aa7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 SEPT12Q8IYM1 358 aa7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 DNAAF2Q9NVR5 837 aaKnown RBP7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 SLAIN2Q9P270 581 aa7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 MAP4K5Q9Y4K4 846 aa7.38□□□□□ -1.23
GTF2E1-205ENST00000497393 BRD1O95696 1058 aa7.37□□□□□ -1.23
GTF2E1-205ENST00000497393 SCTRP47872 440 aa7.37□□□□□ -1.23
GTF2E1-205ENST00000497393 TRIM50Q86XT4 487 aa7.37□□□□□ -1.23
GTF2E1-205ENST00000497393 ERVH48-1M5A8F1 160 aa7.36□□□□□ -1.23
GTF2E1-205ENST00000497393 DKK1O94907 266 aa7.36□□□□□ -1.23
GTF2E1-205ENST00000497393 FAM69CQ0P6D2 419 aa7.36□□□□□ -1.23
GTF2E1-205ENST00000497393 PCDHGA11Q9Y5H2 935 aa7.36□□□□□ -1.23
GTF2E1-205ENST00000497393 ZBTB7BO15156 539 aaPredicted RBP7.35□□□□□ -1.23
GTF2E1-205ENST00000497393 CD2BP2O95400 341 aaKnown RBP7.35□□□□□ -1.23
GTF2E1-205ENST00000497393 ATP1A2P50993 1020 aa7.35□□□□□ -1.23
GTF2E1-205ENST00000497393 PSME1Q06323 249 aa7.35□□□□□ -1.23
GTF2E1-205ENST00000497393 SIX5Q8N196 739 aa7.35□□□□□ -1.23
GTF2E1-205ENST00000497393 TPCN2Q8NHX9 752 aa7.35□□□□□ -1.23
GTF2E1-205ENST00000497393 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
GTF2E1-205ENST00000497393 TMPRSS4Q9NRS4 437 aa7.35□□□□□ -1.23
GTF2E1-205ENST00000497393 SIAH2O43255 324 aa7.34□□□□□ -1.23
GTF2E1-205ENST00000497393 SLC19A1P41440 591 aa7.34□□□□□ -1.23
GTF2E1-205ENST00000497393 GRM5P41594 1212 aa7.34□□□□□ -1.23
GTF2E1-205ENST00000497393 KCNA1Q09470 495 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms