RNA–Protein interactions for RNA: ENST00000497393.1

GTF2E1-205, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 1 (best)

Gene GTF2E1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-205ENST00000497393 AEBP2Q6ZN18 517 aaPredicted RBP18.28■□□□□ 0.52
GTF2E1-205ENST00000497393 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
GTF2E1-205ENST00000497393 PHF23Q9BUL5 403 aaPredicted RBP16.04■□□□□ 0.16
GTF2E1-205ENST00000497393 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
GTF2E1-205ENST00000497393 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
GTF2E1-205ENST00000497393 FOXD1Q16676 465 aa14.26□□□□□ -0.13
GTF2E1-205ENST00000497393 ADRA2BP18089 450 aa14.04□□□□□ -0.16
GTF2E1-205ENST00000497393 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
GTF2E1-205ENST00000497393 PIAS4Q8N2W9 510 aaPredicted RBP13.53□□□□□ -0.24
GTF2E1-205ENST00000497393 KCNA4P22459 653 aa13.33□□□□□ -0.28
GTF2E1-205ENST00000497393 PPP4R3CPQ6ZMV5 832 aa13.17□□□□□ -0.3
GTF2E1-205ENST00000497393 MSH5O43196 834 aa12.94□□□□□ -0.34
GTF2E1-205ENST00000497393 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
GTF2E1-205ENST00000497393 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
GTF2E1-205ENST00000497393 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
GTF2E1-205ENST00000497393 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
GTF2E1-205ENST00000497393 SCAF1Q9H7N4 1312 aaKnown RBP12.7□□□□□ -0.38
GTF2E1-205ENST00000497393 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
GTF2E1-205ENST00000497393 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
GTF2E1-205ENST00000497393 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
GTF2E1-205ENST00000497393 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
GTF2E1-205ENST00000497393 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
GTF2E1-205ENST00000497393 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
GTF2E1-205ENST00000497393 ZBTB22O15209 634 aa12.32□□□□□ -0.44
GTF2E1-205ENST00000497393 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
GTF2E1-205ENST00000497393 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
GTF2E1-205ENST00000497393 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
GTF2E1-205ENST00000497393 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
GTF2E1-205ENST00000497393 DCAF8L1A6NGE4 600 aa11.81□□□□□ -0.52
GTF2E1-205ENST00000497393 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
GTF2E1-205ENST00000497393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.54
GTF2E1-205ENST00000497393 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
GTF2E1-205ENST00000497393 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
GTF2E1-205ENST00000497393 ATF5Q9Y2D1 282 aaPredicted RBP11.49□□□□□ -0.57
GTF2E1-205ENST00000497393 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
GTF2E1-205ENST00000497393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
GTF2E1-205ENST00000497393 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
GTF2E1-205ENST00000497393 FKBP8Q14318 412 aa11.27□□□□□ -0.61
GTF2E1-205ENST00000497393 ZNF219Q9P2Y4 722 aaPredicted RBP11.2□□□□□ -0.62
GTF2E1-205ENST00000497393 APLP2Q06481 763 aa11.18□□□□□ -0.62
GTF2E1-205ENST00000497393 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
GTF2E1-205ENST00000497393 SPINK5Q9NQ38 1064 aaPredicted RBP11.14□□□□□ -0.63
GTF2E1-205ENST00000497393 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
GTF2E1-205ENST00000497393 CAPN15O75808 1086 aa11.03□□□□□ -0.64
GTF2E1-205ENST00000497393 C1QBPQ07021 282 aaKnown RBP11□□□□□ -0.65
GTF2E1-205ENST00000497393 MKRN4PQ13434 485 aaPredicted RBP11□□□□□ -0.65
GTF2E1-205ENST00000497393 POLA2Q14181 598 aa10.95□□□□□ -0.66
GTF2E1-205ENST00000497393 RTN4Q9NQC3 1192 aaKnown RBP10.93□□□□□ -0.66
GTF2E1-205ENST00000497393 ABCB7O75027 752 aa10.9□□□□□ -0.66
GTF2E1-205ENST00000497393 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
GTF2E1-205ENST00000497393 FBLN2P98095 1184 aa10.87□□□□□ -0.67
GTF2E1-205ENST00000497393 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
GTF2E1-205ENST00000497393 DSG3P32926 999 aa10.76□□□□□ -0.69
GTF2E1-205ENST00000497393 PROM2Q8N271 834 aa10.75□□□□□ -0.69
GTF2E1-205ENST00000497393 ZBTB12Q9Y330 459 aaPredicted RBP10.74□□□□□ -0.69
GTF2E1-205ENST00000497393 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
GTF2E1-205ENST00000497393 OSCARQ8IYS5 282 aa10.63□□□□□ -0.71
GTF2E1-205ENST00000497393 CACNB1Q02641 598 aaPredicted RBP10.62□□□□□ -0.71
GTF2E1-205ENST00000497393 VASPP50552 380 aaPredicted RBP10.59□□□□□ -0.71
GTF2E1-205ENST00000497393 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
GTF2E1-205ENST00000497393 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
GTF2E1-205ENST00000497393 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
GTF2E1-205ENST00000497393 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
GTF2E1-205ENST00000497393 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
GTF2E1-205ENST00000497393 IFNLR1Q8IU57 520 aaPredicted RBP10.49□□□□□ -0.73
GTF2E1-205ENST00000497393 PABPN1Q86U42 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
GTF2E1-205ENST00000497393 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
GTF2E1-205ENST00000497393 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
GTF2E1-205ENST00000497393 KLHL34Q8N239 644 aa10.3□□□□□ -0.76
GTF2E1-205ENST00000497393 PKD2Q13563 968 aa10.29□□□□□ -0.76
GTF2E1-205ENST00000497393 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
GTF2E1-205ENST00000497393 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
GTF2E1-205ENST00000497393 MIER1Q8N108 512 aa10.25□□□□□ -0.77
GTF2E1-205ENST00000497393 DCAF8L2P0C7V8 631 aa10.2□□□□□ -0.78
GTF2E1-205ENST00000497393 RBM42Q9BTD8 480 aaKnown RBP10.18□□□□□ -0.78
GTF2E1-205ENST00000497393 AKT1S1Q96B36 256 aa10.15□□□□□ -0.78
GTF2E1-205ENST00000497393 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
GTF2E1-205ENST00000497393 PLEKHG5O94827 1062 aa10.11□□□□□ -0.79
GTF2E1-205ENST00000497393 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
GTF2E1-205ENST00000497393 REM2Q8IYK8 340 aaPredicted RBP10.09□□□□□ -0.79
GTF2E1-205ENST00000497393 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
GTF2E1-205ENST00000497393 ZBTB47Q9UFB7 747 aaPredicted RBP10.08□□□□□ -0.8
GTF2E1-205ENST00000497393 RGL2O15211 777 aa10.06□□□□□ -0.8
GTF2E1-205ENST00000497393 PLCB2Q00722 1185 aa10.06□□□□□ -0.8
GTF2E1-205ENST00000497393 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
GTF2E1-205ENST00000497393 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
GTF2E1-205ENST00000497393 PRR29P0C7W0 189 aa10.01□□□□□ -0.81
GTF2E1-205ENST00000497393 PITPNM1O00562 1244 aa10□□□□□ -0.81
GTF2E1-205ENST00000497393 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
GTF2E1-205ENST00000497393 NUBP1P53384 320 aa9.99□□□□□ -0.81
GTF2E1-205ENST00000497393 MNX1P50219 401 aaPredicted RBP9.97□□□□□ -0.81
GTF2E1-205ENST00000497393 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
GTF2E1-205ENST00000497393 GSE1Q14687 1217 aa9.91□□□□□ -0.82
GTF2E1-205ENST00000497393 RNF25Q96BH1 459 aaPredicted RBP9.91□□□□□ -0.82
GTF2E1-205ENST00000497393 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
GTF2E1-205ENST00000497393 BBXQ8WY36 941 aaPredicted RBP9.9□□□□□ -0.82
GTF2E1-205ENST00000497393 DCAF8Q5TAQ9 597 aa9.89□□□□□ -0.83
GTF2E1-205ENST00000497393 RASEFQ8IZ41 740 aa9.89□□□□□ -0.83
GTF2E1-205ENST00000497393 CHGAP10645 457 aaKnown RBP9.87□□□□□ -0.83
GTF2E1-205ENST00000497393 FAM212AQ96EL1 285 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms