RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 CGNL1Q0VF96 1302 aa22.76■■□□□ 1.23
HCLS1-212ENST00000497391 LARP1Q6PKG0 1096 aaKnown RBP22.74■■□□□ 1.23
HCLS1-212ENST00000497391 TOM1L2Q6ZVM7 507 aa22.74■■□□□ 1.23
HCLS1-212ENST00000497391 THRAP3Q9Y2W1 955 aaKnown RBP22.74■■□□□ 1.23
HCLS1-212ENST00000497391 CRB1P82279 1406 aa22.74■■□□□ 1.23
HCLS1-212ENST00000497391 ONECUT3O60422 494 aaPredicted RBP22.73■■□□□ 1.23
HCLS1-212ENST00000497391 TCP11L2Q8N4U5 519 aa22.73■■□□□ 1.23
HCLS1-212ENST00000497391 GGNBP2Q9H3C7 697 aa22.72■■□□□ 1.23
HCLS1-212ENST00000497391 KIF20BQ96Q89 1820 aa22.71■■□□□ 1.23
HCLS1-212ENST00000497391 FYB1O15117 783 aa22.71■■□□□ 1.23
HCLS1-212ENST00000497391 KRT27Q7Z3Y8 459 aa22.71■■□□□ 1.23
HCLS1-212ENST00000497391 WDR17Q8IZU2 1322 aa22.71■■□□□ 1.23
HCLS1-212ENST00000497391 BARGINQ6ZT62 677 aa22.7■■□□□ 1.22
HCLS1-212ENST00000497391 AMPHP49418 695 aa22.69■■□□□ 1.22
HCLS1-212ENST00000497391 LTN1O94822 1766 aa22.68■■□□□ 1.22
HCLS1-212ENST00000497391 BLMP54132 1417 aaPredicted RBP22.68■■□□□ 1.22
HCLS1-212ENST00000497391 UPF1Q92900 1129 aaKnown RBP eCLIP22.68■■□□□ 1.22
HCLS1-212ENST00000497391 CARD14Q9BXL6 1004 aa22.68■■□□□ 1.22
HCLS1-212ENST00000497391 PANK3Q9H999 370 aa22.67■■□□□ 1.22
HCLS1-212ENST00000497391 AXIN2Q9Y2T1 843 aa22.67■■□□□ 1.22
HCLS1-212ENST00000497391 COL18A1P39060 1754 aa22.67■■□□□ 1.22
HCLS1-212ENST00000497391 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
HCLS1-212ENST00000497391 RTL1A6NKG5 1358 aa22.65■■□□□ 1.22
HCLS1-212ENST00000497391 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
HCLS1-212ENST00000497391 CCDC125Q86Z20 511 aa22.65■■□□□ 1.22
HCLS1-212ENST00000497391 IP6K1Q92551 441 aa22.65■■□□□ 1.22
HCLS1-212ENST00000497391 CDCA7Q9BWT1 371 aaPredicted RBP22.65■■□□□ 1.22
HCLS1-212ENST00000497391 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
HCLS1-212ENST00000497391 THSD7AQ9UPZ6 1657 aa22.65■■□□□ 1.22
HCLS1-212ENST00000497391 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
HCLS1-212ENST00000497391 SF3B2Q13435 895 aaKnown RBP22.64■■□□□ 1.21
HCLS1-212ENST00000497391 ANKRD24Q8TF21 1146 aa22.64■■□□□ 1.21
HCLS1-212ENST00000497391 CARD10Q9BWT7 1032 aa22.64■■□□□ 1.21
HCLS1-212ENST00000497391 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
HCLS1-212ENST00000497391 NSD2O96028 1365 aa22.63■■□□□ 1.21
HCLS1-212ENST00000497391 ERBB3P21860 1342 aa22.63■■□□□ 1.21
HCLS1-212ENST00000497391 MAP3K19Q56UN5 1328 aa22.63■■□□□ 1.21
HCLS1-212ENST00000497391 C11orf95C9JLR9 678 aaPredicted RBP22.63■■□□□ 1.21
HCLS1-212ENST00000497391 NLRP2Q9NX02 1062 aa22.63■■□□□ 1.21
HCLS1-212ENST00000497391 BRWD3Q6RI45 1802 aa22.61■■□□□ 1.21
HCLS1-212ENST00000497391 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
HCLS1-212ENST00000497391 RGPD5Q99666 1765 aa22.59■■□□□ 1.21
HCLS1-212ENST00000497391 HOXC9P31274 260 aa22.59■■□□□ 1.21
HCLS1-212ENST00000497391 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
HCLS1-212ENST00000497391 LTV1Q96GA3 475 aaPredicted RBP22.59■■□□□ 1.21
HCLS1-212ENST00000497391 DDB1Q16531 1140 aa22.58■■□□□ 1.21
HCLS1-212ENST00000497391 FLT4P35916 1363 aa22.58■■□□□ 1.21
HCLS1-212ENST00000497391 FAM208AQ9UK61 1670 aaKnown RBP22.57■■□□□ 1.2
HCLS1-212ENST00000497391 FAM196AQ6ZSG2 479 aa22.56■■□□□ 1.2
HCLS1-212ENST00000497391 PARP4Q9UKK3 1724 aaKnown RBP22.55■■□□□ 1.2
HCLS1-212ENST00000497391 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
HCLS1-212ENST00000497391 ZEB1P37275 1124 aaPredicted RBP22.55■■□□□ 1.2
HCLS1-212ENST00000497391 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
HCLS1-212ENST00000497391 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
HCLS1-212ENST00000497391 FBLN1P23142 703 aa22.54■■□□□ 1.2
HCLS1-212ENST00000497391 TNNT2P45379 298 aaPredicted RBP22.53■■□□□ 1.2
HCLS1-212ENST00000497391 WASHC2AQ641Q2 1341 aa22.53■■□□□ 1.2
HCLS1-212ENST00000497391 INSRP06213 1382 aa22.52■■□□□ 1.2
HCLS1-212ENST00000497391 EXOC5O00471 708 aa22.52■■□□□ 1.2
HCLS1-212ENST00000497391 IL2RBP14784 551 aa22.52■■□□□ 1.2
HCLS1-212ENST00000497391 EP400Q96L91 3159 aa22.51■■□□□ 1.19
HCLS1-212ENST00000497391 OVOS2A0A0G2JMS6 1433 aa22.51■■□□□ 1.19
HCLS1-212ENST00000497391 WNK3Q9BYP7 1800 aa22.51■■□□□ 1.19
HCLS1-212ENST00000497391 FAM182BQ5T319 152 aa22.5■■□□□ 1.19
HCLS1-212ENST00000497391 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
HCLS1-212ENST00000497391 BAG6P46379 1132 aa22.49■■□□□ 1.19
HCLS1-212ENST00000497391 EMILIN1Q9Y6C2 1016 aa22.49■■□□□ 1.19
HCLS1-212ENST00000497391 DISP2A7MBM2 1401 aa22.48■■□□□ 1.19
HCLS1-212ENST00000497391 TNS2Q63HR2 1409 aa22.48■■□□□ 1.19
HCLS1-212ENST00000497391 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
HCLS1-212ENST00000497391 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
HCLS1-212ENST00000497391 RAPGEF4Q8WZA2 1011 aa22.45■■□□□ 1.18
HCLS1-212ENST00000497391 POLKQ9UBT6 870 aa22.45■■□□□ 1.18
HCLS1-212ENST00000497391 AMER1Q5JTC6 1135 aaPredicted RBP22.44■■□□□ 1.18
HCLS1-212ENST00000497391 PEAK1Q9H792 1746 aa22.43■■□□□ 1.18
HCLS1-212ENST00000497391 TRIM37O94972 964 aa22.43■■□□□ 1.18
HCLS1-212ENST00000497391 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
HCLS1-212ENST00000497391 TATP17735 454 aaPredicted RBP22.41■■□□□ 1.18
HCLS1-212ENST00000497391 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
HCLS1-212ENST00000497391 NPC1L1Q9UHC9 1359 aa22.4■■□□□ 1.18
HCLS1-212ENST00000497391 NBPF6Q5VWK0 638 aa22.4■■□□□ 1.18
HCLS1-212ENST00000497391 NBPF4Q96M43 638 aa22.4■■□□□ 1.18
HCLS1-212ENST00000497391 PER1O15534 1290 aaPredicted RBP22.39■■□□□ 1.17
HCLS1-212ENST00000497391 MARCH10Q8NA82 808 aaPredicted RBP22.39■■□□□ 1.17
HCLS1-212ENST00000497391 APBA3O96018 575 aa22.38■■□□□ 1.17
HCLS1-212ENST00000497391 USHBP1Q8N6Y0 703 aa22.38■■□□□ 1.17
HCLS1-212ENST00000497391 CNGB1Q14028 1251 aaPredicted RBP22.37■■□□□ 1.17
HCLS1-212ENST00000497391 DEFB132Q7Z7B7 95 aa22.37■■□□□ 1.17
HCLS1-212ENST00000497391 BCL9O00512 1426 aa22.37■■□□□ 1.17
HCLS1-212ENST00000497391 ZCRB1Q8TBF4 217 aaKnown RBP22.36■■□□□ 1.17
HCLS1-212ENST00000497391 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
HCLS1-212ENST00000497391 PARD3Q8TEW0 1356 aa22.36■■□□□ 1.17
HCLS1-212ENST00000497391 EIF4A2Q14240 407 aaKnown RBP22.34■■□□□ 1.17
HCLS1-212ENST00000497391 BCL11BQ9C0K0 894 aaPredicted RBP22.34■■□□□ 1.17
HCLS1-212ENST00000497391 RGPD2P0DJD1 1756 aa22.34■■□□□ 1.17
HCLS1-212ENST00000497391 TNS1Q9HBL0 1735 aaKnown RBP22.34■■□□□ 1.17
HCLS1-212ENST00000497391 MEGF6O75095 1541 aa22.33■■□□□ 1.17
HCLS1-212ENST00000497391 EN1Q05925 392 aaPredicted RBP22.32■■□□□ 1.16
HCLS1-212ENST00000497391 PCDH11XQ9BZA7 1347 aa22.31■■□□□ 1.16
HCLS1-212ENST00000497391 PCDH11YQ9BZA8 1340 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms