RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 FAM50AQ14320 339 aaKnown RBP8.58□□□□□ -1.04
UBE3C-208ENST00000497368 PLEKHG1Q9ULL1 1385 aa8.58□□□□□ -1.04
UBE3C-208ENST00000497368 PPLO60437 1756 aa8.58□□□□□ -1.04
UBE3C-208ENST00000497368 PTPRUQ92729 1446 aa8.57□□□□□ -1.04
UBE3C-208ENST00000497368 SEMA3EO15041 775 aa8.57□□□□□ -1.04
UBE3C-208ENST00000497368 HRO43593 1189 aa8.57□□□□□ -1.04
UBE3C-208ENST00000497368 PROX2Q3B8N5 592 aa8.57□□□□□ -1.04
UBE3C-208ENST00000497368 TMEM94Q12767 1356 aa8.57□□□□□ -1.04
UBE3C-208ENST00000497368 KIF1BO60333 1816 aa8.57□□□□□ -1.04
UBE3C-208ENST00000497368 TXNDC2Q86VQ3 553 aa8.56□□□□□ -1.04
UBE3C-208ENST00000497368 PPARGC1BQ86YN6 1023 aaKnown RBP8.56□□□□□ -1.04
UBE3C-208ENST00000497368 RNF166Q96A37 237 aaPredicted RBP8.56□□□□□ -1.04
UBE3C-208ENST00000497368 PHLPP1O60346 1717 aa8.56□□□□□ -1.04
UBE3C-208ENST00000497368 NHSL1Q5SYE7 1610 aa8.55□□□□□ -1.04
UBE3C-208ENST00000497368 SLC4A5Q9BY07 1137 aa8.55□□□□□ -1.04
UBE3C-208ENST00000497368 CDHR5Q9HBB8 845 aa8.55□□□□□ -1.04
UBE3C-208ENST00000497368 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
UBE3C-208ENST00000497368 AHDC1Q5TGY3 1603 aaPredicted RBP8.54□□□□□ -1.04
UBE3C-208ENST00000497368 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
UBE3C-208ENST00000497368 SHPRHQ149N8 1683 aa8.53□□□□□ -1.04
UBE3C-208ENST00000497368 SLC26A8Q96RN1 970 aa8.53□□□□□ -1.04
UBE3C-208ENST00000497368 HFM1A2PYH4 1435 aa8.53□□□□□ -1.04
UBE3C-208ENST00000497368 FAM135BQ49AJ0 1406 aa8.53□□□□□ -1.04
UBE3C-208ENST00000497368 LRP6O75581 1613 aa8.52□□□□□ -1.05
UBE3C-208ENST00000497368 LAMC1P11047 1609 aa8.52□□□□□ -1.05
UBE3C-208ENST00000497368 STAC3Q96MF2 364 aa8.52□□□□□ -1.05
UBE3C-208ENST00000497368 NUP155O75694 1391 aa8.51□□□□□ -1.05
UBE3C-208ENST00000497368 BHMG1C9JSJ3 638 aaPredicted RBP8.51□□□□□ -1.05
UBE3C-208ENST00000497368 SOCS7O14512 581 aa8.51□□□□□ -1.05
UBE3C-208ENST00000497368 TOM1O60784 492 aa8.51□□□□□ -1.05
UBE3C-208ENST00000497368 KCNA6P17658 529 aa8.51□□□□□ -1.05
UBE3C-208ENST00000497368 SLC52A1Q9NWF4 448 aa8.51□□□□□ -1.05
UBE3C-208ENST00000497368 KNDC1Q76NI1 1749 aa8.5□□□□□ -1.05
UBE3C-208ENST00000497368 PRAG1Q86YV5 1406 aa8.5□□□□□ -1.05
UBE3C-208ENST00000497368 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
UBE3C-208ENST00000497368 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
UBE3C-208ENST00000497368 KIAA1468Q9P260 1216 aa8.49□□□□□ -1.05
UBE3C-208ENST00000497368 RGS17Q9UGC6 210 aaPredicted RBP8.49□□□□□ -1.05
UBE3C-208ENST00000497368 RABGEF1Q9UJ41 708 aa8.49□□□□□ -1.05
UBE3C-208ENST00000497368 EID1Q9Y6B2 187 aa8.49□□□□□ -1.05
UBE3C-208ENST00000497368 ITGAEP38570 1179 aa8.48□□□□□ -1.05
UBE3C-208ENST00000497368 NUTM2DQ5VT03 806 aaPredicted RBP8.48□□□□□ -1.05
UBE3C-208ENST00000497368 MRPL50Q8N5N7 158 aaKnown RBP8.48□□□□□ -1.05
UBE3C-208ENST00000497368 TSKSQ9UJT2 592 aa8.48□□□□□ -1.05
UBE3C-208ENST00000497368 METP08581 1390 aa8.48□□□□□ -1.05
UBE3C-208ENST00000497368 PIK3R4Q99570 1358 aa8.48□□□□□ -1.05
UBE3C-208ENST00000497368 MST1RQ04912 1400 aa8.47□□□□□ -1.05
UBE3C-208ENST00000497368 KCTD12Q96CX2 325 aaKnown RBP8.47□□□□□ -1.05
UBE3C-208ENST00000497368 CDCA7LQ96GN5 454 aa8.47□□□□□ -1.05
UBE3C-208ENST00000497368 NBPF3Q9H094 633 aa8.47□□□□□ -1.05
UBE3C-208ENST00000497368 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
UBE3C-208ENST00000497368 NCOA3Q9Y6Q9 1424 aa8.46□□□□□ -1.05
UBE3C-208ENST00000497368 PRSS12P56730 875 aa8.46□□□□□ -1.06
UBE3C-208ENST00000497368 FAM198AQ9UFP1 575 aa8.46□□□□□ -1.06
UBE3C-208ENST00000497368 SEPT9Q9UHD8 586 aaPredicted RBP8.46□□□□□ -1.06
UBE3C-208ENST00000497368 DCCP43146 1447 aa8.46□□□□□ -1.06
UBE3C-208ENST00000497368 SPATA31E1Q6ZUB1 1445 aa8.46□□□□□ -1.06
UBE3C-208ENST00000497368 NUTM2FA1L443 756 aa8.45□□□□□ -1.06
UBE3C-208ENST00000497368 RBM26Q5T8P6 1007 aaKnown RBP8.45□□□□□ -1.06
UBE3C-208ENST00000497368 TBX22Q9Y458 520 aa8.45□□□□□ -1.06
UBE3C-208ENST00000497368 PTCH1Q13635 1447 aa8.45□□□□□ -1.06
UBE3C-208ENST00000497368 ADGRL3Q9HAR2 1447 aa8.45□□□□□ -1.06
UBE3C-208ENST00000497368 GOLGA8CPA6NN73 597 aa8.44□□□□□ -1.06
UBE3C-208ENST00000497368 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
UBE3C-208ENST00000497368 ONECUT3O60422 494 aaPredicted RBP8.44□□□□□ -1.06
UBE3C-208ENST00000497368 MSH6P52701 1360 aa8.44□□□□□ -1.06
UBE3C-208ENST00000497368 CDC42BPGQ6DT37 1551 aa8.44□□□□□ -1.06
UBE3C-208ENST00000497368 FMN2Q9NZ56 1722 aa8.43□□□□□ -1.06
UBE3C-208ENST00000497368 SMAPO00193 183 aa8.43□□□□□ -1.06
UBE3C-208ENST00000497368 PADI6Q6TGC4 694 aa8.43□□□□□ -1.06
UBE3C-208ENST00000497368 PROSER2Q86WR7 435 aaPredicted RBP8.43□□□□□ -1.06
UBE3C-208ENST00000497368 COL22A1Q8NFW1 1626 aaPredicted RBP8.43□□□□□ -1.06
UBE3C-208ENST00000497368 PTGDRQ13258 359 aa8.42□□□□□ -1.06
UBE3C-208ENST00000497368 SMYD5Q6GMV2 418 aa8.42□□□□□ -1.06
UBE3C-208ENST00000497368 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
UBE3C-208ENST00000497368 WNT2BQ93097 391 aa8.42□□□□□ -1.06
UBE3C-208ENST00000497368 ABCA3Q99758 1704 aa8.42□□□□□ -1.06
UBE3C-208ENST00000497368 MARF1Q9Y4F3 1742 aaKnown RBP8.42□□□□□ -1.06
UBE3C-208ENST00000497368 RGPD8O14715 1765 aaPredicted RBP8.42□□□□□ -1.06
UBE3C-208ENST00000497368 NRXN1Q9ULB1 1477 aa8.41□□□□□ -1.06
UBE3C-208ENST00000497368 ROBO2Q9HCK4 1378 aa8.41□□□□□ -1.06
UBE3C-208ENST00000497368 USP32Q8NFA0 1604 aa8.4□□□□□ -1.06
UBE3C-208ENST00000497368 PPP1R15AO75807 674 aaPredicted RBP8.4□□□□□ -1.06
UBE3C-208ENST00000497368 POTEAQ6S8J7 498 aa8.4□□□□□ -1.06
UBE3C-208ENST00000497368 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.4□□□□□ -1.06
UBE3C-208ENST00000497368 TECPR2O15040 1411 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 PIK3C2GO75747 1445 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 SETD5Q9C0A6 1442 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 JCADQ9P266 1359 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 PTPN5P54829 565 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 LAPTM4BQ86VI4 370 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 TTC13Q8NBP0 860 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 ZFRQ96KR1 1074 aaKnown RBP8.39□□□□□ -1.07
UBE3C-208ENST00000497368 SLAIN2Q9P270 581 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
UBE3C-208ENST00000497368 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 AMOTL2Q9Y2J4 779 aa8.39□□□□□ -1.07
UBE3C-208ENST00000497368 C1orf167Q5SNV9 1468 aa8.38□□□□□ -1.07
UBE3C-208ENST00000497368 CRYBG1Q9Y4K1 1723 aa8.38□□□□□ -1.07
UBE3C-208ENST00000497368 NBPF26B4DH59 902 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms