RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 ARHGAP9Q9BRR9 750 aa10.43□□□□□ -0.74
MSH5-219ENST00000497269 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
MSH5-219ENST00000497269 FBXO45P0C2W1 286 aa10.42□□□□□ -0.74
MSH5-219ENST00000497269 FOXC1Q12948 553 aa10.42□□□□□ -0.74
MSH5-219ENST00000497269 ZNF697Q5TEC3 545 aa10.42□□□□□ -0.74
MSH5-219ENST00000497269 SPRYD7Q5W111 196 aa10.42□□□□□ -0.74
MSH5-219ENST00000497269 WWC1Q8IX03 1113 aa10.41□□□□□ -0.74
MSH5-219ENST00000497269 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
MSH5-219ENST00000497269 ZC3H4Q9UPT8 1303 aaKnown RBP10.4□□□□□ -0.74
MSH5-219ENST00000497269 POM121CA8CG34 1229 aa10.4□□□□□ -0.74
MSH5-219ENST00000497269 ZBBXA8MT70 800 aa10.4□□□□□ -0.74
MSH5-219ENST00000497269 PTK2Q05397 1052 aa10.4□□□□□ -0.74
MSH5-219ENST00000497269 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
MSH5-219ENST00000497269 PDXDC2PQ6P474 469 aa10.4□□□□□ -0.74
MSH5-219ENST00000497269 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
MSH5-219ENST00000497269 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.74
MSH5-219ENST00000497269 WRNQ14191 1432 aaPredicted RBP eCLIP10.4□□□□□ -0.75
MSH5-219ENST00000497269 ABCA5Q8WWZ7 1642 aa10.4□□□□□ -0.75
MSH5-219ENST00000497269 A6NJR5 290 aa10.39□□□□□ -0.75
MSH5-219ENST00000497269 RC3H1Q5TC82 1133 aaKnown RBP10.39□□□□□ -0.75
MSH5-219ENST00000497269 SH3BP5LQ7L8J4 393 aa10.39□□□□□ -0.75
MSH5-219ENST00000497269 BPHLQ86WA6 291 aaPredicted RBP10.39□□□□□ -0.75
MSH5-219ENST00000497269 EHBP1Q8NDI1 1231 aa10.39□□□□□ -0.75
MSH5-219ENST00000497269 GPKOWQ92917 476 aaPredicted RBP eCLIP10.39□□□□□ -0.75
MSH5-219ENST00000497269 OCSTAMPQ9BR26 566 aa10.39□□□□□ -0.75
MSH5-219ENST00000497269 ADAM32Q8TC27 787 aa10.38□□□□□ -0.75
MSH5-219ENST00000497269 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
MSH5-219ENST00000497269 GRIN2AQ12879 1464 aa10.37□□□□□ -0.75
MSH5-219ENST00000497269 ARID3CA6NKF2 412 aa10.37□□□□□ -0.75
MSH5-219ENST00000497269 TNFRSF10AO00220 468 aa10.37□□□□□ -0.75
MSH5-219ENST00000497269 WNT7BP56706 349 aa10.37□□□□□ -0.75
MSH5-219ENST00000497269 NR1H3Q13133 447 aa10.37□□□□□ -0.75
MSH5-219ENST00000497269 ZNF598Q86UK7 904 aaKnown RBP10.37□□□□□ -0.75
MSH5-219ENST00000497269 PCDHB9Q9Y5E1 797 aa10.37□□□□□ -0.75
MSH5-219ENST00000497269 CEP170Q5SW79 1584 aa10.36□□□□□ -0.75
MSH5-219ENST00000497269 TRAK2O60296 914 aa10.36□□□□□ -0.75
MSH5-219ENST00000497269 ARID5BQ14865 1188 aa10.36□□□□□ -0.75
MSH5-219ENST00000497269 ERICH6Q7L0X2 663 aa10.36□□□□□ -0.75
MSH5-219ENST00000497269 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
MSH5-219ENST00000497269 TTBK1Q5TCY1 1321 aaPredicted RBP10.35□□□□□ -0.75
MSH5-219ENST00000497269 SH3RF1Q7Z6J0 888 aa10.35□□□□□ -0.75
MSH5-219ENST00000497269 FNBP4Q8N3X1 1017 aaPredicted RBP10.35□□□□□ -0.75
MSH5-219ENST00000497269 TLL2Q9Y6L7 1015 aa10.35□□□□□ -0.75
MSH5-219ENST00000497269 TOP2BQ02880 1626 aa10.34□□□□□ -0.75
MSH5-219ENST00000497269 WASHC4Q2M389 1173 aa10.34□□□□□ -0.75
MSH5-219ENST00000497269 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
MSH5-219ENST00000497269 MRGPRX2Q96LB1 330 aa10.34□□□□□ -0.75
MSH5-219ENST00000497269 DZIP3Q86Y13 1208 aaKnown RBP10.33□□□□□ -0.76
MSH5-219ENST00000497269 GPSM3Q9Y4H4 160 aa10.33□□□□□ -0.76
MSH5-219ENST00000497269 ADAMTS12P58397 1594 aa10.33□□□□□ -0.76
MSH5-219ENST00000497269 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
MSH5-219ENST00000497269 RAB15P59190 212 aa10.32□□□□□ -0.76
MSH5-219ENST00000497269 FAM174AQ8TBP5 190 aa10.32□□□□□ -0.76
MSH5-219ENST00000497269 SLC10A4Q96EP9 437 aa10.32□□□□□ -0.76
MSH5-219ENST00000497269 FHAD1B1AJZ9 1412 aa10.32□□□□□ -0.76
MSH5-219ENST00000497269 WNT7AO00755 349 aa10.31□□□□□ -0.76
MSH5-219ENST00000497269 VARSP26640 1264 aaKnown RBP10.31□□□□□ -0.76
MSH5-219ENST00000497269 EIF4G2P78344 907 aaKnown RBP eCLIP10.31□□□□□ -0.76
MSH5-219ENST00000497269 PKD2L1Q9P0L9 805 aa10.31□□□□□ -0.76
MSH5-219ENST00000497269 SEMA3FQ13275 785 aa10.3□□□□□ -0.76
MSH5-219ENST00000497269 NUP160Q12769 1436 aa10.3□□□□□ -0.76
MSH5-219ENST00000497269 PRG4Q92954 1404 aaPredicted RBP10.3□□□□□ -0.76
MSH5-219ENST00000497269 GLMNQ92990 594 aa10.29□□□□□ -0.76
MSH5-219ENST00000497269 ALDH1A1P00352 501 aa10.28□□□□□ -0.76
MSH5-219ENST00000497269 HDGFL1Q5TGJ6 251 aa10.28□□□□□ -0.76
MSH5-219ENST00000497269 VASH1Q7L8A9 365 aaPredicted RBP10.28□□□□□ -0.76
MSH5-219ENST00000497269 ADAMTS19Q8TE59 1207 aa10.28□□□□□ -0.76
MSH5-219ENST00000497269 C1QTNF2Q9BXJ5 285 aa10.28□□□□□ -0.76
MSH5-219ENST00000497269 TTC24A2A3L6 582 aaPredicted RBP10.27□□□□□ -0.77
MSH5-219ENST00000497269 GDF9O60383 454 aa10.27□□□□□ -0.77
MSH5-219ENST00000497269 CALR3Q96L12 384 aaKnown RBP10.27□□□□□ -0.77
MSH5-219ENST00000497269 TRIM67Q6ZTA4 783 aa10.26□□□□□ -0.77
MSH5-219ENST00000497269 CYP4X1Q8N118 509 aa10.26□□□□□ -0.77
MSH5-219ENST00000497269 ERICH3Q5RHP9 1530 aa10.25□□□□□ -0.77
MSH5-219ENST00000497269 SIAH2O43255 324 aa10.25□□□□□ -0.77
MSH5-219ENST00000497269 FSHRP23945 695 aa10.25□□□□□ -0.77
MSH5-219ENST00000497269 J3QL48 77 aa10.24□□□□□ -0.77
MSH5-219ENST00000497269 FAM69CQ0P6D2 419 aa10.24□□□□□ -0.77
MSH5-219ENST00000497269 ARID3AQ99856 593 aa10.24□□□□□ -0.77
MSH5-219ENST00000497269 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
MSH5-219ENST00000497269 SHROOM2Q13796 1616 aa10.24□□□□□ -0.77
MSH5-219ENST00000497269 GIGYF1O75420 1035 aaPredicted RBP10.23□□□□□ -0.77
MSH5-219ENST00000497269 RGS20O76081 388 aa10.23□□□□□ -0.77
MSH5-219ENST00000497269 TRMT44Q8IYL2 757 aaKnown RBP10.23□□□□□ -0.77
MSH5-219ENST00000497269 KCTD15Q96SI1 283 aaPredicted RBP10.23□□□□□ -0.77
MSH5-219ENST00000497269 ALG2Q9H553 416 aa10.23□□□□□ -0.77
MSH5-219ENST00000497269 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
MSH5-219ENST00000497269 WASF2Q9Y6W5 498 aa10.23□□□□□ -0.77
MSH5-219ENST00000497269 PIK3CDO00329 1044 aa10.22□□□□□ -0.77
MSH5-219ENST00000497269 SNIP1Q8TAD8 396 aaKnown RBP10.22□□□□□ -0.77
MSH5-219ENST00000497269 SOX11P35716 441 aa10.21□□□□□ -0.77
MSH5-219ENST00000497269 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.77
MSH5-219ENST00000497269 CEP126Q9P2H0 1117 aa10.21□□□□□ -0.77
MSH5-219ENST00000497269 IGF1RP08069 1367 aa10.21□□□□□ -0.78
MSH5-219ENST00000497269 SLFNL1Q499Z3 407 aa10.2□□□□□ -0.78
MSH5-219ENST00000497269 KIF13AQ9H1H9 1805 aa10.2□□□□□ -0.78
MSH5-219ENST00000497269 GFRA3O60609 400 aa10.19□□□□□ -0.78
MSH5-219ENST00000497269 ADH1CP00326 375 aa10.19□□□□□ -0.78
MSH5-219ENST00000497269 INTS6LQ5JSJ4 861 aaKnown RBP10.19□□□□□ -0.78
MSH5-219ENST00000497269 RNF135Q8IUD6 432 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms