RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 SPATA31A6Q5VVP1 1343 aa24.53■■□□□ 1.52
RGP1-202ENST00000496906 HSP90AB2PQ58FF8 381 aa24.53■■□□□ 1.52
RGP1-202ENST00000496906 PRDM11Q9NQV5 511 aa24.52■■□□□ 1.52
RGP1-202ENST00000496906 COL18A1P39060 1754 aa24.52■■□□□ 1.52
RGP1-202ENST00000496906 BLMP54132 1417 aaPredicted RBP24.5■■□□□ 1.51
RGP1-202ENST00000496906 NUTM2BA6NNL0 878 aaPredicted RBP24.5■■□□□ 1.51
RGP1-202ENST00000496906 NUTM2EB1AL46 878 aaPredicted RBP24.5■■□□□ 1.51
RGP1-202ENST00000496906 CHRNA2Q15822 529 aa24.5■■□□□ 1.51
RGP1-202ENST00000496906 NUTM2AQ8IVF1 878 aaPredicted RBP24.5■■□□□ 1.51
RGP1-202ENST00000496906 DIAPH1O60610 1272 aaKnown RBP24.49■■□□□ 1.51
RGP1-202ENST00000496906 PNISRQ8TF01 805 aaKnown RBP24.49■■□□□ 1.51
RGP1-202ENST00000496906 AXIN2Q9Y2T1 843 aa24.49■■□□□ 1.51
RGP1-202ENST00000496906 LMO7Q8WWI1 1683 aa24.48■■□□□ 1.51
RGP1-202ENST00000496906 FAM83GA6ND36 823 aa24.47■■□□□ 1.51
RGP1-202ENST00000496906 IL13P35225 146 aa24.47■■□□□ 1.51
RGP1-202ENST00000496906 EIF4A2Q14240 407 aaKnown RBP24.47■■□□□ 1.51
RGP1-202ENST00000496906 LRP6O75581 1613 aa24.47■■□□□ 1.51
RGP1-202ENST00000496906 ADAMTS2O95450 1211 aa24.46■■□□□ 1.51
RGP1-202ENST00000496906 COL14A1Q05707 1796 aaKnown RBP24.45■■□□□ 1.5
RGP1-202ENST00000496906 CAMTA1Q9Y6Y1 1673 aa24.44■■□□□ 1.5
RGP1-202ENST00000496906 NUDCQ9Y266 331 aa24.43■■□□□ 1.5
RGP1-202ENST00000496906 ERBB3P21860 1342 aa24.43■■□□□ 1.5
RGP1-202ENST00000496906 RGPD5Q99666 1765 aa24.43■■□□□ 1.5
RGP1-202ENST00000496906 WDR43Q15061 677 aaKnown RBP eCLIP24.42■■□□□ 1.5
RGP1-202ENST00000496906 ANKRD24Q8TF21 1146 aa24.42■■□□□ 1.5
RGP1-202ENST00000496906 LTV1Q96GA3 475 aaPredicted RBP24.42■■□□□ 1.5
RGP1-202ENST00000496906 COL5A2P05997 1499 aaPredicted RBP24.41■■□□□ 1.5
RGP1-202ENST00000496906 FAM9BQ8IZU0 186 aa24.41■■□□□ 1.5
RGP1-202ENST00000496906 RGPD1P0DJD0 1748 aa24.4■■□□□ 1.5
RGP1-202ENST00000496906 U2SURPO15042 1029 aaKnown RBP24.4■■□□□ 1.5
RGP1-202ENST00000496906 PLCH1Q4KWH8 1693 aa24.38■■□□□ 1.49
RGP1-202ENST00000496906 BTG4Q9NY30 223 aa24.38■■□□□ 1.49
RGP1-202ENST00000496906 ADAMTS8Q9UP79 889 aa24.38■■□□□ 1.49
RGP1-202ENST00000496906 U2AF1L5P0DN76 240 aaPredicted RBP24.37■■□□□ 1.49
RGP1-202ENST00000496906 U2AF1Q01081 240 aaKnown RBP eCLIP24.37■■□□□ 1.49
RGP1-202ENST00000496906 EYA1Q99502 592 aa24.37■■□□□ 1.49
RGP1-202ENST00000496906 IGSF1Q8N6C5 1336 aa24.37■■□□□ 1.49
RGP1-202ENST00000496906 SLIT2O94813 1529 aa24.37■■□□□ 1.49
RGP1-202ENST00000496906 WDR17Q8IZU2 1322 aa24.35■■□□□ 1.49
RGP1-202ENST00000496906 C8orf37Q96NL8 207 aa24.35■■□□□ 1.49
RGP1-202ENST00000496906 FAM208AQ9UK61 1670 aaKnown RBP24.35■■□□□ 1.49
RGP1-202ENST00000496906 NBPF6Q5VWK0 638 aa24.34■■□□□ 1.49
RGP1-202ENST00000496906 NBPF4Q96M43 638 aa24.34■■□□□ 1.49
RGP1-202ENST00000496906 NWD2Q9ULI1 1742 aa24.33■■□□□ 1.49
RGP1-202ENST00000496906 CSB-PGBD3P0DP91 1061 aa24.33■■□□□ 1.49
RGP1-202ENST00000496906 NCAPD2Q15021 1401 aa24.33■■□□□ 1.49
RGP1-202ENST00000496906 NRAPQ86VF7 1730 aa24.33■■□□□ 1.49
RGP1-202ENST00000496906 MEX3CQ5U5Q3 659 aaKnown RBP24.33■■□□□ 1.48
RGP1-202ENST00000496906 KDRP35968 1356 aa24.32■■□□□ 1.48
RGP1-202ENST00000496906 NGLY1Q96IV0 654 aa24.32■■□□□ 1.48
RGP1-202ENST00000496906 STRN4Q9NRL3 753 aa24.32■■□□□ 1.48
RGP1-202ENST00000496906 RGPD2P0DJD1 1756 aa24.32■■□□□ 1.48
RGP1-202ENST00000496906 HMOX1P09601 288 aa24.31■■□□□ 1.48
RGP1-202ENST00000496906 EVA1CP58658 441 aa24.31■■□□□ 1.48
RGP1-202ENST00000496906 SULT6B1Q6IMI4 303 aa24.31■■□□□ 1.48
RGP1-202ENST00000496906 AEBP1Q8IUX7 1158 aa24.31■■□□□ 1.48
RGP1-202ENST00000496906 FNBP4Q8N3X1 1017 aaPredicted RBP24.31■■□□□ 1.48
RGP1-202ENST00000496906 FCHSD2O94868 740 aa24.3■■□□□ 1.48
RGP1-202ENST00000496906 RSPH6AQ9H0K4 717 aa24.3■■□□□ 1.48
RGP1-202ENST00000496906 LARP1Q6PKG0 1096 aaKnown RBP24.29■■□□□ 1.48
RGP1-202ENST00000496906 USHBP1Q8N6Y0 703 aa24.29■■□□□ 1.48
RGP1-202ENST00000496906 NLRP2Q9NX02 1062 aa24.29■■□□□ 1.48
RGP1-202ENST00000496906 BCL9LQ86UU0 1499 aa24.28■■□□□ 1.48
RGP1-202ENST00000496906 CRB1P82279 1406 aa24.28■■□□□ 1.48
RGP1-202ENST00000496906 TOM1L2Q6ZVM7 507 aa24.28■■□□□ 1.48
RGP1-202ENST00000496906 PRKAR2BP31323 418 aa24.26■■□□□ 1.47
RGP1-202ENST00000496906 UNC5CLQ8IV45 518 aa24.26■■□□□ 1.47
RGP1-202ENST00000496906 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
RGP1-202ENST00000496906 PLEKHF1Q96S99 279 aa24.26■■□□□ 1.47
RGP1-202ENST00000496906 CARD10Q9BWT7 1032 aa24.26■■□□□ 1.47
RGP1-202ENST00000496906 PNNQ9H307 717 aaKnown RBP24.25■■□□□ 1.47
RGP1-202ENST00000496906 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.24■■□□□ 1.47
RGP1-202ENST00000496906 RUNDC1Q96C34 613 aa24.24■■□□□ 1.47
RGP1-202ENST00000496906 USP21Q9UK80 565 aa24.24■■□□□ 1.47
RGP1-202ENST00000496906 AFF2P51816 1311 aa24.23■■□□□ 1.47
RGP1-202ENST00000496906 VPS72Q15906 364 aa24.2■■□□□ 1.46
RGP1-202ENST00000496906 SPATA31A1Q5TZJ5 1347 aa24.2■■□□□ 1.46
RGP1-202ENST00000496906 SPATA31A5Q5VU36 1347 aa24.2■■□□□ 1.46
RGP1-202ENST00000496906 SPATA31A7Q8IWB4 1347 aa24.2■■□□□ 1.46
RGP1-202ENST00000496906 MAPK8IP3Q9UPT6 1336 aa24.2■■□□□ 1.46
RGP1-202ENST00000496906 PHACTR3Q96KR7 559 aa24.19■■□□□ 1.46
RGP1-202ENST00000496906 MEGF6O75095 1541 aa24.18■■□□□ 1.46
RGP1-202ENST00000496906 USP35Q9P2H5 1018 aa24.18■■□□□ 1.46
RGP1-202ENST00000496906 NEFMP07197 916 aa24.17■■□□□ 1.46
RGP1-202ENST00000496906 RAPGEF4Q8WZA2 1011 aa24.17■■□□□ 1.46
RGP1-202ENST00000496906 PLEKHG2Q9H7P9 1386 aa24.17■■□□□ 1.46
RGP1-202ENST00000496906 APAF1O14727 1248 aa24.16■■□□□ 1.46
RGP1-202ENST00000496906 TCP11L2Q8N4U5 519 aa24.16■■□□□ 1.46
RGP1-202ENST00000496906 DISP2A7MBM2 1401 aa24.15■■□□□ 1.46
RGP1-202ENST00000496906 ATRNO75882 1429 aa24.15■■□□□ 1.46
RGP1-202ENST00000496906 THRAP3Q9Y2W1 955 aaKnown RBP24.15■■□□□ 1.46
RGP1-202ENST00000496906 CCDC9Q9Y3X0 531 aaKnown RBP24.15■■□□□ 1.46
RGP1-202ENST00000496906 IL2RBP14784 551 aa24.14■■□□□ 1.45
RGP1-202ENST00000496906 TATP17735 454 aaPredicted RBP24.14■■□□□ 1.45
RGP1-202ENST00000496906 HNRNPUQ00839 825 aaKnown RBP eCLIP24.14■■□□□ 1.45
RGP1-202ENST00000496906 YTHDC1Q96MU7 727 aaKnown RBP24.14■■□□□ 1.45
RGP1-202ENST00000496906 OVOS2A0A0G2JMS6 1433 aa24.13■■□□□ 1.45
RGP1-202ENST00000496906 SENP3-EIF4A1A0A087X0R7 540 aa24.13■■□□□ 1.45
RGP1-202ENST00000496906 PARP4Q9UKK3 1724 aaKnown RBP24.13■■□□□ 1.45
RGP1-202ENST00000496906 RGS17Q9UGC6 210 aaPredicted RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms