RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 CCDC116Q8IYX3 515 aa13.34□□□□□ -0.27
TARDBP-210ENST00000496840 PRM3Q9NNZ6 103 aa13.34□□□□□ -0.27
TARDBP-210ENST00000496840 GMPR2Q9P2T1 348 aaKnown RBP13.34□□□□□ -0.27
TARDBP-210ENST00000496840 DZIP3Q86Y13 1208 aaKnown RBP13.33□□□□□ -0.28
TARDBP-210ENST00000496840 ZIC2O95409 532 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-210ENST00000496840 NR1H3Q13133 447 aa13.32□□□□□ -0.28
TARDBP-210ENST00000496840 MCM6Q14566 821 aa13.32□□□□□ -0.28
TARDBP-210ENST00000496840 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
TARDBP-210ENST00000496840 EMILIN1Q9Y6C2 1016 aa13.32□□□□□ -0.28
TARDBP-210ENST00000496840 ITPKCQ96DU7 683 aa13.31□□□□□ -0.28
TARDBP-210ENST00000496840 DHX9Q08211 1270 aaKnown RBP13.3□□□□□ -0.28
TARDBP-210ENST00000496840 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
TARDBP-210ENST00000496840 TRIM46Q7Z4K8 759 aa13.3□□□□□ -0.28
TARDBP-210ENST00000496840 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
TARDBP-210ENST00000496840 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
TARDBP-210ENST00000496840 ZFAND3Q9H8U3 227 aa13.29□□□□□ -0.28
TARDBP-210ENST00000496840 TBC1D2BQ9UPU7 963 aa13.29□□□□□ -0.28
TARDBP-210ENST00000496840 ESPNB1AK53 854 aa13.28□□□□□ -0.28
TARDBP-210ENST00000496840 MCCD1P59942 119 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-210ENST00000496840 PPP1R26Q5T8A7 1209 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-210ENST00000496840 TRIM47Q96LD4 638 aa13.28□□□□□ -0.28
TARDBP-210ENST00000496840 ZNF330Q9Y3S2 320 aaPredicted RBP13.28□□□□□ -0.28
TARDBP-210ENST00000496840 BMP1P13497 986 aa13.27□□□□□ -0.29
TARDBP-210ENST00000496840 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.29
TARDBP-210ENST00000496840 C11orf95C9JLR9 678 aaPredicted RBP13.26□□□□□ -0.29
TARDBP-210ENST00000496840 MRPL14Q6P1L8 145 aaKnown RBP13.26□□□□□ -0.29
TARDBP-210ENST00000496840 SEPT12Q8IYM1 358 aa13.26□□□□□ -0.29
TARDBP-210ENST00000496840 PCDHB9Q9Y5E1 797 aa13.26□□□□□ -0.29
TARDBP-210ENST00000496840 MEIOBQ8N635 442 aa13.24□□□□□ -0.29
TARDBP-210ENST00000496840 IRF5Q13568 498 aa13.22□□□□□ -0.29
TARDBP-210ENST00000496840 SCARF1Q14162 830 aa13.22□□□□□ -0.29
TARDBP-210ENST00000496840 CCDC125Q86Z20 511 aa13.22□□□□□ -0.29
TARDBP-210ENST00000496840 GDPD2Q9HCC8 539 aa13.22□□□□□ -0.29
TARDBP-210ENST00000496840 FLIIQ13045 1269 aa13.21□□□□□ -0.29
TARDBP-210ENST00000496840 Q6ZVU0 165 aa13.2□□□□□ -0.3
TARDBP-210ENST00000496840 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
TARDBP-210ENST00000496840 ERVH48-1M5A8F1 160 aa13.19□□□□□ -0.3
TARDBP-210ENST00000496840 SNRPBP14678 240 aaKnown RBP13.19□□□□□ -0.3
TARDBP-210ENST00000496840 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
TARDBP-210ENST00000496840 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
TARDBP-210ENST00000496840 UPP2O95045 317 aa13.17□□□□□ -0.3
TARDBP-210ENST00000496840 RNF20Q5VTR2 975 aa13.17□□□□□ -0.3
TARDBP-210ENST00000496840 LINC00528Q8N1L1 170 aa13.17□□□□□ -0.3
TARDBP-210ENST00000496840 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
TARDBP-210ENST00000496840 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
TARDBP-210ENST00000496840 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
TARDBP-210ENST00000496840 ABL2P42684 1182 aa13.16□□□□□ -0.3
TARDBP-210ENST00000496840 RAB15P59190 212 aa13.16□□□□□ -0.3
TARDBP-210ENST00000496840 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
TARDBP-210ENST00000496840 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.38e-11■■□□□ 12.1
TARDBP-210ENST00000496840 CBLBQ13191 982 aa13.15□□□□□ -0.3
TARDBP-210ENST00000496840 ZNF784Q8NCA9 323 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-210ENST00000496840 ZNF775Q96BV0 537 aaPredicted RBP13.15□□□□□ -0.3
TARDBP-210ENST00000496840 TMPRSS4Q9NRS4 437 aa13.15□□□□□ -0.3
TARDBP-210ENST00000496840 LILRA1O75019 489 aa13.13□□□□□ -0.31
TARDBP-210ENST00000496840 BMP2P12643 396 aa13.12□□□□□ -0.31
TARDBP-210ENST00000496840 VAC14Q08AM6 782 aa13.11□□□□□ -0.31
TARDBP-210ENST00000496840 C6orf118Q5T5N4 469 aa13.11□□□□□ -0.31
TARDBP-210ENST00000496840 CEP126Q9P2H0 1117 aa13.11□□□□□ -0.31
TARDBP-210ENST00000496840 SPINT1O43278 529 aa13.08□□□□□ -0.32
TARDBP-210ENST00000496840 RAD21O60216 631 aa13.08□□□□□ -0.32
TARDBP-210ENST00000496840 ADH1AP07327 375 aa13.08□□□□□ -0.32
TARDBP-210ENST00000496840 UBTFP17480 764 aaKnown RBP13.08□□□□□ -0.32
TARDBP-210ENST00000496840 SOX11P35716 441 aa13.08□□□□□ -0.32
TARDBP-210ENST00000496840 ADD1P35611 737 aaKnown RBP13.07□□□□□ -0.32
TARDBP-210ENST00000496840 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
TARDBP-210ENST00000496840 WWC1Q8IX03 1113 aa13.07□□□□□ -0.32
TARDBP-210ENST00000496840 POM121Q96HA1 1249 aa13.07□□□□□ -0.32
TARDBP-210ENST00000496840 CYLDQ9NQC7 956 aa13.07□□□□□ -0.32
TARDBP-210ENST00000496840 SOS2Q07890 1332 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-210ENST00000496840 CC2D2BQ6DHV5 1058 aa13.05□□□□□ -0.32
TARDBP-210ENST00000496840 AGBL1Q96MI9 1066 aa13.05□□□□□ -0.32
TARDBP-210ENST00000496840 PCDHB11Q9Y5F2 797 aa13.05□□□□□ -0.32
TARDBP-210ENST00000496840 RELBQ01201 579 aa13.03□□□□□ -0.32
TARDBP-210ENST00000496840 PHTF2Q8N3S3 785 aa13.03□□□□□ -0.32
TARDBP-210ENST00000496840 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-210ENST00000496840 MAN1A2O60476 641 aa13.02□□□□□ -0.33
TARDBP-210ENST00000496840 PTGIRP43119 386 aa13.02□□□□□ -0.33
TARDBP-210ENST00000496840 TTLL8A6PVC2 850 aa13.01□□□□□ -0.33
TARDBP-210ENST00000496840 SEMA3FQ13275 785 aa13.01□□□□□ -0.33
TARDBP-210ENST00000496840 SLFNL1Q499Z3 407 aa13.01□□□□□ -0.33
TARDBP-210ENST00000496840 CCDC85AQ96PX6 553 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-210ENST00000496840 TERTO14746 1132 aaKnown RBP13□□□□□ -0.33
TARDBP-210ENST00000496840 NPAS3Q8IXF0 933 aa13□□□□□ -0.33
TARDBP-210ENST00000496840 NXF1Q9UBU9 619 aaKnown RBP13□□□□□ -0.33
TARDBP-210ENST00000496840 DNMT3LQ9UJW3 386 aa13□□□□□ -0.33
TARDBP-210ENST00000496840 CHIC2Q9UKJ5 165 aa13□□□□□ -0.33
TARDBP-210ENST00000496840 SOBPA7XYQ1 873 aa12.99□□□□□ -0.33
TARDBP-210ENST00000496840 SCTRP47872 440 aa12.99□□□□□ -0.33
TARDBP-210ENST00000496840 NFX1Q12986 1120 aaKnown RBP12.99□□□□□ -0.33
TARDBP-210ENST00000496840 TREML4Q6UXN2 200 aa12.99□□□□□ -0.33
TARDBP-210ENST00000496840 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
TARDBP-210ENST00000496840 RNF135Q8IUD6 432 aa12.98□□□□□ -0.33
TARDBP-210ENST00000496840 ZNF395Q9H8N7 513 aaPredicted RBP12.98□□□□□ -0.33
TARDBP-210ENST00000496840 TRAK2O60296 914 aa12.97□□□□□ -0.33
TARDBP-210ENST00000496840 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.97□□□□□ -0.33
TARDBP-210ENST00000496840 LCE2AQ5TA79 106 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-210ENST00000496840 CYP2U1Q7Z449 544 aa12.97□□□□□ -0.33
TARDBP-210ENST00000496840 INSM2Q96T92 566 aaPredicted RBP12.97□□□□□ -0.33
TARDBP-210ENST00000496840 OSBPL3Q9H4L5 887 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms