RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 NSD2O96028 1365 aa27.65■■■□□ 2.02
TSC22D4-206ENST00000496728 AMPHP49418 695 aa27.65■■■□□ 2.02
TSC22D4-206ENST00000496728 LMO7Q8WWI1 1683 aa27.65■■■□□ 2.02
TSC22D4-206ENST00000496728 MAP3K19Q56UN5 1328 aa27.65■■■□□ 2.02
TSC22D4-206ENST00000496728 NRAPQ86VF7 1730 aa27.64■■■□□ 2.01
TSC22D4-206ENST00000496728 COL5A2P05997 1499 aaPredicted RBP27.64■■■□□ 2.01
TSC22D4-206ENST00000496728 KIF20BQ96Q89 1820 aa27.63■■■□□ 2.01
TSC22D4-206ENST00000496728 PER1O15534 1290 aaPredicted RBP27.63■■■□□ 2.01
TSC22D4-206ENST00000496728 CSB-PGBD3P0DP91 1061 aa27.63■■■□□ 2.01
TSC22D4-206ENST00000496728 RRS1Q15050 365 aaKnown RBP27.63■■■□□ 2.01
TSC22D4-206ENST00000496728 IP6K1Q92551 441 aa27.63■■■□□ 2.01
TSC22D4-206ENST00000496728 SPATA31A1Q5TZJ5 1347 aa27.63■■■□□ 2.01
TSC22D4-206ENST00000496728 AMER1Q5JTC6 1135 aaPredicted RBP27.61■■■□□ 2.01
TSC22D4-206ENST00000496728 TOM1L2Q6ZVM7 507 aa27.61■■■□□ 2.01
TSC22D4-206ENST00000496728 MORC1Q86VD1 984 aa27.61■■■□□ 2.01
TSC22D4-206ENST00000496728 USP35Q9P2H5 1018 aa27.61■■■□□ 2.01
TSC22D4-206ENST00000496728 ABCC6O95255 1503 aa27.61■■■□□ 2.01
TSC22D4-206ENST00000496728 WDR17Q8IZU2 1322 aa27.6■■■□□ 2.01
TSC22D4-206ENST00000496728 COL18A1P39060 1754 aa27.59■■■□□ 2.01
TSC22D4-206ENST00000496728 ONECUT3O60422 494 aaPredicted RBP27.59■■■□□ 2.01
TSC22D4-206ENST00000496728 HOXC9P31274 260 aa27.59■■■□□ 2.01
TSC22D4-206ENST00000496728 TNNT2P45379 298 aaPredicted RBP27.59■■■□□ 2.01
TSC22D4-206ENST00000496728 FAM98CQ17RN3 349 aaKnown RBP27.59■■■□□ 2.01
TSC22D4-206ENST00000496728 RGS12O14924 1447 aa27.58■■■□□ 2.01
TSC22D4-206ENST00000496728 GLI3P10071 1580 aa27.58■■■□□ 2.01
TSC22D4-206ENST00000496728 A0A0G2JS52 829 aa27.58■■■□□ 2.01
TSC22D4-206ENST00000496728 MYT1Q01538 1121 aa27.58■■■□□ 2.01
TSC22D4-206ENST00000496728 TCP11L2Q8N4U5 519 aa27.58■■■□□ 2.01
TSC22D4-206ENST00000496728 CRB1P82279 1406 aa27.58■■■□□ 2
TSC22D4-206ENST00000496728 ANKRD24Q8TF21 1146 aa27.57■■■□□ 2
TSC22D4-206ENST00000496728 BLMP54132 1417 aaPredicted RBP27.57■■■□□ 2
TSC22D4-206ENST00000496728 SEPT12Q8IYM1 358 aa27.56■■■□□ 2
TSC22D4-206ENST00000496728 THRAP3Q9Y2W1 955 aaKnown RBP27.56■■■□□ 2
TSC22D4-206ENST00000496728 RTL1A6NKG5 1358 aa27.56■■■□□ 2
TSC22D4-206ENST00000496728 ERBB3P21860 1342 aa27.55■■■□□ 2
TSC22D4-206ENST00000496728 PPM1GO15355 546 aaPredicted RBP27.54■■■□□ 2
TSC22D4-206ENST00000496728 CC2D1BQ5T0F9 858 aaKnown RBP27.54■■■□□ 2
TSC22D4-206ENST00000496728 KIF24Q5T7B8 1368 aa27.54■■■□□ 2
TSC22D4-206ENST00000496728 BARGINQ6ZT62 677 aa27.54■■■□□ 2
TSC22D4-206ENST00000496728 LTV1Q96GA3 475 aaPredicted RBP27.54■■■□□ 2
TSC22D4-206ENST00000496728 EMILIN1Q9Y6C2 1016 aa27.54■■■□□ 2
TSC22D4-206ENST00000496728 CARD10Q9BWT7 1032 aa27.53■■■□□ 2
TSC22D4-206ENST00000496728 NLRP2Q9NX02 1062 aa27.53■■■□□ 2
TSC22D4-206ENST00000496728 LTN1O94822 1766 aa27.53■■■□□ 2
TSC22D4-206ENST00000496728 POLKQ9UBT6 870 aa27.52■■■□□ 2
TSC22D4-206ENST00000496728 FLT4P35916 1363 aa27.51■■□□□ 1.99
TSC22D4-206ENST00000496728 NPC1L1Q9UHC9 1359 aa27.51■■□□□ 1.99
TSC22D4-206ENST00000496728 SOCS7O14512 581 aa27.5■■□□□ 1.99
TSC22D4-206ENST00000496728 CNGB1Q14028 1251 aaPredicted RBP27.49■■□□□ 1.99
TSC22D4-206ENST00000496728 HSP90AB2PQ58FF8 381 aa27.49■■□□□ 1.99
TSC22D4-206ENST00000496728 INSRP06213 1382 aa27.48■■□□□ 1.99
TSC22D4-206ENST00000496728 ANKRD26Q9UPS8 1709 aa27.47■■□□□ 1.99
TSC22D4-206ENST00000496728 RGPD5Q99666 1765 aa27.46■■□□□ 1.99
TSC22D4-206ENST00000496728 DDX10Q13206 875 aaKnown RBP27.46■■□□□ 1.99
TSC22D4-206ENST00000496728 SMG6Q86US8 1419 aaKnown RBP27.46■■□□□ 1.99
TSC22D4-206ENST00000496728 KRT27Q7Z3Y8 459 aa27.45■■□□□ 1.98
TSC22D4-206ENST00000496728 CDCA7Q9BWT1 371 aaPredicted RBP27.45■■□□□ 1.98
TSC22D4-206ENST00000496728 ZNF316A6NFI3 1004 aaPredicted RBP27.4■■□□□ 1.98
TSC22D4-206ENST00000496728 PDE3BQ13370 1112 aa27.4■■□□□ 1.98
TSC22D4-206ENST00000496728 PEAK1Q9H792 1746 aa27.39■■□□□ 1.98
TSC22D4-206ENST00000496728 NBPF6Q5VWK0 638 aa27.38■■□□□ 1.97
TSC22D4-206ENST00000496728 NBPF4Q96M43 638 aa27.38■■□□□ 1.97
TSC22D4-206ENST00000496728 THSD7AQ9UPZ6 1657 aa27.37■■□□□ 1.97
TSC22D4-206ENST00000496728 IL2RBP14784 551 aa27.37■■□□□ 1.97
TSC22D4-206ENST00000496728 MTHFSP49914 203 aa27.37■■□□□ 1.97
TSC22D4-206ENST00000496728 DDB1Q16531 1140 aa27.37■■□□□ 1.97
TSC22D4-206ENST00000496728 MAP2P11137 1827 aaKnown RBP27.37■■□□□ 1.97
TSC22D4-206ENST00000496728 EXOC5O00471 708 aa27.35■■□□□ 1.97
TSC22D4-206ENST00000496728 EIF4A2Q14240 407 aaKnown RBP27.34■■□□□ 1.97
TSC22D4-206ENST00000496728 DISP2A7MBM2 1401 aa27.33■■□□□ 1.97
TSC22D4-206ENST00000496728 USHBP1Q8N6Y0 703 aa27.33■■□□□ 1.97
TSC22D4-206ENST00000496728 UPF1Q92900 1129 aaKnown RBP eCLIP27.32■■□□□ 1.96
TSC22D4-206ENST00000496728 FAM208AQ9UK61 1670 aaKnown RBP27.32■■□□□ 1.96
TSC22D4-206ENST00000496728 FAM182BQ5T319 152 aa27.31■■□□□ 1.96
TSC22D4-206ENST00000496728 RAPGEF4Q8WZA2 1011 aa27.31■■□□□ 1.96
TSC22D4-206ENST00000496728 EYA1Q99502 592 aa27.31■■□□□ 1.96
TSC22D4-206ENST00000496728 BRWD3Q6RI45 1802 aa27.29■■□□□ 1.96
TSC22D4-206ENST00000496728 FAM196AQ6ZSG2 479 aa27.28■■□□□ 1.96
TSC22D4-206ENST00000496728 TATP17735 454 aaPredicted RBP27.26■■□□□ 1.95
TSC22D4-206ENST00000496728 PPP2R1AP30153 589 aa27.26■■□□□ 1.95
TSC22D4-206ENST00000496728 PARP4Q9UKK3 1724 aaKnown RBP27.26■■□□□ 1.95
TSC22D4-206ENST00000496728 CCDC125Q86Z20 511 aa27.25■■□□□ 1.95
TSC22D4-206ENST00000496728 IL13P35225 146 aa27.24■■□□□ 1.95
TSC22D4-206ENST00000496728 CFAP53Q96M91 514 aa27.24■■□□□ 1.95
TSC22D4-206ENST00000496728 TNS2Q63HR2 1409 aa27.24■■□□□ 1.95
TSC22D4-206ENST00000496728 DIAPH1O60610 1272 aaKnown RBP27.23■■□□□ 1.95
TSC22D4-206ENST00000496728 MARCH10Q8NA82 808 aaPredicted RBP27.23■■□□□ 1.95
TSC22D4-206ENST00000496728 ZCRB1Q8TBF4 217 aaKnown RBP27.23■■□□□ 1.95
TSC22D4-206ENST00000496728 PARD3Q8TEW0 1356 aa27.22■■□□□ 1.95
TSC22D4-206ENST00000496728 IGSF1Q8N6C5 1336 aa27.22■■□□□ 1.95
TSC22D4-206ENST00000496728 RALBP1Q15311 655 aa27.22■■□□□ 1.95
TSC22D4-206ENST00000496728 LRRC37A3O60309 1634 aa27.21■■□□□ 1.95
TSC22D4-206ENST00000496728 SF3B2Q13435 895 aaKnown RBP27.21■■□□□ 1.95
TSC22D4-206ENST00000496728 WNK3Q9BYP7 1800 aa27.2■■□□□ 1.95
TSC22D4-206ENST00000496728 RGPD2P0DJD1 1756 aa27.2■■□□□ 1.95
TSC22D4-206ENST00000496728 OVOS2A0A0G2JMS6 1433 aa27.2■■□□□ 1.94
TSC22D4-206ENST00000496728 NCAPD2Q15021 1401 aa27.2■■□□□ 1.94
TSC22D4-206ENST00000496728 DDX54Q8TDD1 881 aaKnown RBP27.2■■□□□ 1.94
TSC22D4-206ENST00000496728 MEGF6O75095 1541 aa27.2■■□□□ 1.94
TSC22D4-206ENST00000496728 TRIM37O94972 964 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms