RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 SLIT3O75094 1523 aa16.35■□□□□ 0.21
LRP8-211ENST00000496580 C11orf95C9JLR9 678 aaPredicted RBP16.34■□□□□ 0.21
LRP8-211ENST00000496580 MARCH10Q8NA82 808 aaPredicted RBP16.33■□□□□ 0.2
LRP8-211ENST00000496580 PIK3C2AO00443 1686 aa16.32■□□□□ 0.2
LRP8-211ENST00000496580 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
LRP8-211ENST00000496580 TOM1L2Q6ZVM7 507 aa16.32■□□□□ 0.2
LRP8-211ENST00000496580 FHDC1Q9C0D6 1143 aaPredicted RBP16.32■□□□□ 0.2
LRP8-211ENST00000496580 GOLGB1Q14789 3259 aaKnown RBP16.31■□□□□ 0.2
LRP8-211ENST00000496580 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
LRP8-211ENST00000496580 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
LRP8-211ENST00000496580 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
LRP8-211ENST00000496580 SYT17Q9BSW7 474 aa16.3■□□□□ 0.2
LRP8-211ENST00000496580 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
LRP8-211ENST00000496580 AXIN2Q9Y2T1 843 aa16.3■□□□□ 0.2
LRP8-211ENST00000496580 KIAA1210Q9ULL0 1709 aa16.3■□□□□ 0.2
LRP8-211ENST00000496580 CHD4Q14839 1912 aa16.29■□□□□ 0.2
LRP8-211ENST00000496580 BCL9O00512 1426 aa16.29■□□□□ 0.2
LRP8-211ENST00000496580 USP6P35125 1406 aa16.29■□□□□ 0.2
LRP8-211ENST00000496580 NLRP6P59044 892 aa16.29■□□□□ 0.2
LRP8-211ENST00000496580 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
LRP8-211ENST00000496580 STAC3Q96MF2 364 aa16.29■□□□□ 0.2
LRP8-211ENST00000496580 STK32BQ9NY57 414 aa16.29■□□□□ 0.2
LRP8-211ENST00000496580 WDR17Q8IZU2 1322 aa16.28■□□□□ 0.2
LRP8-211ENST00000496580 SLC15A2Q16348 729 aa16.28■□□□□ 0.2
LRP8-211ENST00000496580 NBPF1Q3BBV0 1214 aa16.28■□□□□ 0.2
LRP8-211ENST00000496580 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
LRP8-211ENST00000496580 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
LRP8-211ENST00000496580 QRICH2Q9H0J4 1663 aa16.27■□□□□ 0.2
LRP8-211ENST00000496580 CEP350Q5VT06 3117 aa16.27■□□□□ 0.2
LRP8-211ENST00000496580 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
LRP8-211ENST00000496580 NHSQ6T4R5 1651 aa16.25■□□□□ 0.19
LRP8-211ENST00000496580 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
LRP8-211ENST00000496580 MTFR1LQ9H019 292 aa16.25■□□□□ 0.19
LRP8-211ENST00000496580 CABP1Q9NZU7 370 aa16.25■□□□□ 0.19
LRP8-211ENST00000496580 BRD4O60885 1362 aaPredicted RBP16.25■□□□□ 0.19
LRP8-211ENST00000496580 CENPJQ9HC77 1338 aaPredicted RBP16.23■□□□□ 0.19
LRP8-211ENST00000496580 TNS2Q63HR2 1409 aa16.23■□□□□ 0.19
LRP8-211ENST00000496580 SOX12O15370 315 aa16.23■□□□□ 0.19
LRP8-211ENST00000496580 ARHGEF25Q86VW2 580 aa16.22■□□□□ 0.19
LRP8-211ENST00000496580 CDCA7Q9BWT1 371 aaPredicted RBP16.22■□□□□ 0.19
LRP8-211ENST00000496580 CARD10Q9BWT7 1032 aa16.22■□□□□ 0.19
LRP8-211ENST00000496580 TRPM1Q7Z4N2 1603 aa16.22■□□□□ 0.19
LRP8-211ENST00000496580 CSB-PGBD3P0DP91 1061 aa16.21■□□□□ 0.19
LRP8-211ENST00000496580 ACSBG1Q96GR2 724 aa16.21■□□□□ 0.19
LRP8-211ENST00000496580 ARXQ96QS3 562 aa16.21■□□□□ 0.19
LRP8-211ENST00000496580 NFAT5O94916 1531 aa16.2■□□□□ 0.18
LRP8-211ENST00000496580 EXOC5O00471 708 aa16.2■□□□□ 0.18
LRP8-211ENST00000496580 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
LRP8-211ENST00000496580 BTAF1O14981 1849 aa16.19■□□□□ 0.18
LRP8-211ENST00000496580 MAP3K5Q99683 1374 aa16.18■□□□□ 0.18
LRP8-211ENST00000496580 ABCC6O95255 1503 aa16.18■□□□□ 0.18
LRP8-211ENST00000496580 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
LRP8-211ENST00000496580 CCDC7Q96M83 1385 aa16.17■□□□□ 0.18
LRP8-211ENST00000496580 SHANK3Q9BYB0 1731 aa16.16■□□□□ 0.18
LRP8-211ENST00000496580 GPR162Q16538 588 aa16.15■□□□□ 0.18
LRP8-211ENST00000496580 KLHL34Q8N239 644 aa16.15■□□□□ 0.18
LRP8-211ENST00000496580 KCNH5Q8NCM2 988 aa16.15■□□□□ 0.18
LRP8-211ENST00000496580 LRRC4BQ9NT99 713 aa16.15■□□□□ 0.18
LRP8-211ENST00000496580 TUBGCP6Q96RT7 1819 aa16.15■□□□□ 0.18
LRP8-211ENST00000496580 IFFO2Q5TF58 517 aa16.14■□□□□ 0.17
LRP8-211ENST00000496580 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
LRP8-211ENST00000496580 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
LRP8-211ENST00000496580 QSER1Q2KHR3 1735 aa16.13■□□□□ 0.17
LRP8-211ENST00000496580 PELP1Q8IZL8 1130 aaKnown RBP16.12■□□□□ 0.17
LRP8-211ENST00000496580 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
LRP8-211ENST00000496580 EVC2Q86UK5 1308 aa16.11■□□□□ 0.17
LRP8-211ENST00000496580 TTC21AQ8NDW8 1320 aa16.11■□□□□ 0.17
LRP8-211ENST00000496580 MON2Q7Z3U7 1717 aa16.11■□□□□ 0.17
LRP8-211ENST00000496580 LTN1O94822 1766 aa16.1■□□□□ 0.17
LRP8-211ENST00000496580 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
LRP8-211ENST00000496580 ERBB3P21860 1342 aa16.1■□□□□ 0.17
LRP8-211ENST00000496580 NLRP2Q9NX02 1062 aa16.09■□□□□ 0.17
LRP8-211ENST00000496580 PNPLA7Q6ZV29 1317 aa16.09■□□□□ 0.17
LRP8-211ENST00000496580 USP54Q70EL1 1684 aa16.08■□□□□ 0.17
LRP8-211ENST00000496580 KAT6BQ8WYB5 2073 aa16.08■□□□□ 0.16
LRP8-211ENST00000496580 IL2RBP14784 551 aa16.08■□□□□ 0.16
LRP8-211ENST00000496580 KCNQ4P56696 695 aa16.08■□□□□ 0.16
LRP8-211ENST00000496580 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
LRP8-211ENST00000496580 KTN1Q86UP2 1357 aaKnown RBP16.08■□□□□ 0.16
LRP8-211ENST00000496580 POLD1P28340 1107 aa16.06■□□□□ 0.16
LRP8-211ENST00000496580 YBX3P16989 372 aaKnown RBP eCLIP16.05■□□□□ 0.16
LRP8-211ENST00000496580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.16
LRP8-211ENST00000496580 ANKRD24Q8TF21 1146 aa16.05■□□□□ 0.16
LRP8-211ENST00000496580 SLC16A10Q8TF71 515 aa16.05■□□□□ 0.16
LRP8-211ENST00000496580 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
LRP8-211ENST00000496580 USP31Q70CQ4 1352 aa16.04■□□□□ 0.16
LRP8-211ENST00000496580 NME9Q86XW9 330 aa16.04■□□□□ 0.16
LRP8-211ENST00000496580 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
LRP8-211ENST00000496580 LY75O60449 1722 aa16.03■□□□□ 0.16
LRP8-211ENST00000496580 SLC27A3Q5K4L6 730 aa16.02■□□□□ 0.16
LRP8-211ENST00000496580 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.16
LRP8-211ENST00000496580 NSD2O96028 1365 aa16.01■□□□□ 0.15
LRP8-211ENST00000496580 SBNO2Q9Y2G9 1366 aa16.01■□□□□ 0.15
LRP8-211ENST00000496580 DDX54Q8TDD1 881 aaKnown RBP16.01■□□□□ 0.15
LRP8-211ENST00000496580 ATP10DQ9P241 1426 aa16.01■□□□□ 0.15
LRP8-211ENST00000496580 L3MBTL2Q969R5 705 aa16■□□□□ 0.15
LRP8-211ENST00000496580 SYTL4Q96C24 671 aaPredicted RBP15.99■□□□□ 0.15
LRP8-211ENST00000496580 ROCK2O75116 1388 aaKnown RBP15.99■□□□□ 0.15
LRP8-211ENST00000496580 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
LRP8-211ENST00000496580 PRIM1P49642 420 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms