RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 SPATA31A5Q5VU36 1347 aa11.17□□□□□ -0.62
SMARCD3-215ENST00000496530 SPATA31A7Q8IWB4 1347 aa11.17□□□□□ -0.62
SMARCD3-215ENST00000496530 TOM1L2Q6ZVM7 507 aa11.17□□□□□ -0.62
SMARCD3-215ENST00000496530 ARHGEF25Q86VW2 580 aa11.17□□□□□ -0.62
SMARCD3-215ENST00000496530 THRAP3Q9Y2W1 955 aaKnown RBP11.17□□□□□ -0.62
SMARCD3-215ENST00000496530 NSD3Q9BZ95 1437 aa11.17□□□□□ -0.62
SMARCD3-215ENST00000496530 LTN1O94822 1766 aa11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 FAM98CQ17RN3 349 aaKnown RBP11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 DIEXFQ68CQ4 756 aaKnown RBP11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 SEPT12Q8IYM1 358 aa11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 COL5A2P05997 1499 aaPredicted RBP11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 OVOS2A0A0J9YW53 1432 aa11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 CRB1P82279 1406 aa11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 OVOS2Q6IE36 1432 aa11.16□□□□□ -0.62
SMARCD3-215ENST00000496530 NFAT5O94916 1531 aa11.15□□□□□ -0.62
SMARCD3-215ENST00000496530 SPATA31A1Q5TZJ5 1347 aa11.15□□□□□ -0.62
SMARCD3-215ENST00000496530 CAMTA1Q9Y6Y1 1673 aa11.15□□□□□ -0.62
SMARCD3-215ENST00000496530 TCP11L2Q8N4U5 519 aa11.15□□□□□ -0.62
SMARCD3-215ENST00000496530 CCDC7Q96M83 1385 aa11.15□□□□□ -0.63
SMARCD3-215ENST00000496530 FYB1O15117 783 aa11.14□□□□□ -0.63
SMARCD3-215ENST00000496530 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
SMARCD3-215ENST00000496530 AMPHP49418 695 aa11.14□□□□□ -0.63
SMARCD3-215ENST00000496530 LARP1Q6PKG0 1096 aaKnown RBP11.14□□□□□ -0.63
SMARCD3-215ENST00000496530 KRT27Q7Z3Y8 459 aa11.14□□□□□ -0.63
SMARCD3-215ENST00000496530 GGNBP2Q9H3C7 697 aa11.14□□□□□ -0.63
SMARCD3-215ENST00000496530 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
SMARCD3-215ENST00000496530 WDR17Q8IZU2 1322 aa11.13□□□□□ -0.63
SMARCD3-215ENST00000496530 BLMP54132 1417 aaPredicted RBP11.13□□□□□ -0.63
SMARCD3-215ENST00000496530 PDE3BQ13370 1112 aa11.13□□□□□ -0.63
SMARCD3-215ENST00000496530 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
SMARCD3-215ENST00000496530 BARGINQ6ZT62 677 aa11.13□□□□□ -0.63
SMARCD3-215ENST00000496530 KNSTRNQ9Y448 316 aa11.13□□□□□ -0.63
SMARCD3-215ENST00000496530 COL18A1P39060 1754 aa11.13□□□□□ -0.63
SMARCD3-215ENST00000496530 SMG6Q86US8 1419 aaKnown RBP11.12□□□□□ -0.63
SMARCD3-215ENST00000496530 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
SMARCD3-215ENST00000496530 CDCA7Q9BWT1 371 aaPredicted RBP11.12□□□□□ -0.63
SMARCD3-215ENST00000496530 RGPD5Q99666 1765 aa11.12□□□□□ -0.63
SMARCD3-215ENST00000496530 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
SMARCD3-215ENST00000496530 NSD2O96028 1365 aa11.12□□□□□ -0.63
SMARCD3-215ENST00000496530 BRWD3Q6RI45 1802 aa11.12□□□□□ -0.63
SMARCD3-215ENST00000496530 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCD3-215ENST00000496530 FAM208AQ9UK61 1670 aaKnown RBP11.11□□□□□ -0.63
SMARCD3-215ENST00000496530 ANKRD26Q9UPS8 1709 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 ANKRD24Q8TF21 1146 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 IP6K1Q92551 441 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 CARD10Q9BWT7 1032 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 CARD14Q9BXL6 1004 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 NLRP2Q9NX02 1062 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 KIF24Q5T7B8 1368 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 THSD7AQ9UPZ6 1657 aa11.1□□□□□ -0.63
SMARCD3-215ENST00000496530 ERBB3P21860 1342 aa11.09□□□□□ -0.63
SMARCD3-215ENST00000496530 ANP32CO43423 234 aa11.09□□□□□ -0.63
SMARCD3-215ENST00000496530 CC2D1BQ5T0F9 858 aaKnown RBP11.09□□□□□ -0.63
SMARCD3-215ENST00000496530 MAP3K19Q56UN5 1328 aa11.09□□□□□ -0.63
SMARCD3-215ENST00000496530 FLT4P35916 1363 aa11.08□□□□□ -0.64
SMARCD3-215ENST00000496530 WNK3Q9BYP7 1800 aa11.08□□□□□ -0.64
SMARCD3-215ENST00000496530 HOXC9P31274 260 aa11.08□□□□□ -0.64
SMARCD3-215ENST00000496530 RRS1Q15050 365 aaKnown RBP11.08□□□□□ -0.64
SMARCD3-215ENST00000496530 DDB1Q16531 1140 aa11.08□□□□□ -0.64
SMARCD3-215ENST00000496530 PARP4Q9UKK3 1724 aaKnown RBP11.08□□□□□ -0.64
SMARCD3-215ENST00000496530 PPM1GO15355 546 aaPredicted RBP11.07□□□□□ -0.64
SMARCD3-215ENST00000496530 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
SMARCD3-215ENST00000496530 MORC1Q86VD1 984 aa11.07□□□□□ -0.64
SMARCD3-215ENST00000496530 LTV1Q96GA3 475 aaPredicted RBP11.07□□□□□ -0.64
SMARCD3-215ENST00000496530 EXOC5O00471 708 aa11.06□□□□□ -0.64
SMARCD3-215ENST00000496530 TNNT2P45379 298 aaPredicted RBP11.06□□□□□ -0.64
SMARCD3-215ENST00000496530 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
SMARCD3-215ENST00000496530 RGPD1P0DJD0 1748 aa11.05□□□□□ -0.64
SMARCD3-215ENST00000496530 IL2RBP14784 551 aa11.05□□□□□ -0.64
SMARCD3-215ENST00000496530 BAG6P46379 1132 aa11.05□□□□□ -0.64
SMARCD3-215ENST00000496530 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
SMARCD3-215ENST00000496530 INSRP06213 1382 aa11.04□□□□□ -0.64
SMARCD3-215ENST00000496530 FBLN1P23142 703 aa11.04□□□□□ -0.64
SMARCD3-215ENST00000496530 OVOS2A0A0G2JMS6 1433 aa11.03□□□□□ -0.64
SMARCD3-215ENST00000496530 LRRC37A3O60309 1634 aa11.03□□□□□ -0.64
SMARCD3-215ENST00000496530 PER1O15534 1290 aaPredicted RBP11.03□□□□□ -0.64
SMARCD3-215ENST00000496530 MIER1Q8N108 512 aa11.03□□□□□ -0.64
SMARCD3-215ENST00000496530 EMILIN1Q9Y6C2 1016 aa11.03□□□□□ -0.64
SMARCD3-215ENST00000496530 CACNB1Q02641 598 aaPredicted RBP11.02□□□□□ -0.65
SMARCD3-215ENST00000496530 RAPGEF4Q8WZA2 1011 aa11.02□□□□□ -0.65
SMARCD3-215ENST00000496530 TATP17735 454 aaPredicted RBP11.01□□□□□ -0.65
SMARCD3-215ENST00000496530 HSP90AB2PQ58FF8 381 aa11.01□□□□□ -0.65
SMARCD3-215ENST00000496530 FAM182BQ5T319 152 aa11.01□□□□□ -0.65
SMARCD3-215ENST00000496530 POLKQ9UBT6 870 aa11.01□□□□□ -0.65
SMARCD3-215ENST00000496530 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
SMARCD3-215ENST00000496530 TNS2Q63HR2 1409 aa11.01□□□□□ -0.65
SMARCD3-215ENST00000496530 PEAK1Q9H792 1746 aa11□□□□□ -0.65
SMARCD3-215ENST00000496530 TRIM37O94972 964 aa10.99□□□□□ -0.65
SMARCD3-215ENST00000496530 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
SMARCD3-215ENST00000496530 NPC1L1Q9UHC9 1359 aa10.99□□□□□ -0.65
SMARCD3-215ENST00000496530 RGPD2P0DJD1 1756 aa10.98□□□□□ -0.65
SMARCD3-215ENST00000496530 APBA3O96018 575 aa10.98□□□□□ -0.65
SMARCD3-215ENST00000496530 RALBP1Q15311 655 aa10.98□□□□□ -0.65
SMARCD3-215ENST00000496530 ZCRB1Q8TBF4 217 aaKnown RBP10.98□□□□□ -0.65
SMARCD3-215ENST00000496530 NBPF6Q5VWK0 638 aa10.97□□□□□ -0.65
SMARCD3-215ENST00000496530 DDX54Q8TDD1 881 aaKnown RBP10.97□□□□□ -0.65
SMARCD3-215ENST00000496530 NBPF4Q96M43 638 aa10.97□□□□□ -0.65
SMARCD3-215ENST00000496530 TNS1Q9HBL0 1735 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms