RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 CRB1P82279 1406 aa24.91■■□□□ 1.58
NPDC1-206ENST00000496498 RGPD5Q99666 1765 aa24.9■■□□□ 1.58
NPDC1-206ENST00000496498 SEPT12Q8IYM1 358 aa24.9■■□□□ 1.58
NPDC1-206ENST00000496498 CARD14Q9BXL6 1004 aa24.9■■□□□ 1.58
NPDC1-206ENST00000496498 THRAP3Q9Y2W1 955 aaKnown RBP24.9■■□□□ 1.58
NPDC1-206ENST00000496498 CGNL1Q0VF96 1302 aa24.89■■□□□ 1.58
NPDC1-206ENST00000496498 BRWD3Q6RI45 1802 aa24.89■■□□□ 1.58
NPDC1-206ENST00000496498 WDR17Q8IZU2 1322 aa24.88■■□□□ 1.57
NPDC1-206ENST00000496498 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
NPDC1-206ENST00000496498 FAM98CQ17RN3 349 aaKnown RBP24.88■■□□□ 1.57
NPDC1-206ENST00000496498 LARP1Q6PKG0 1096 aaKnown RBP24.88■■□□□ 1.57
NPDC1-206ENST00000496498 BARGINQ6ZT62 677 aa24.88■■□□□ 1.57
NPDC1-206ENST00000496498 C11orf95C9JLR9 678 aaPredicted RBP24.87■■□□□ 1.57
NPDC1-206ENST00000496498 GGNBP2Q9H3C7 697 aa24.87■■□□□ 1.57
NPDC1-206ENST00000496498 KIF7Q2M1P5 1343 aa24.86■■□□□ 1.57
NPDC1-206ENST00000496498 ANKRD26Q9UPS8 1709 aa24.86■■□□□ 1.57
NPDC1-206ENST00000496498 TCP11L2Q8N4U5 519 aa24.86■■□□□ 1.57
NPDC1-206ENST00000496498 AXIN2Q9Y2T1 843 aa24.86■■□□□ 1.57
NPDC1-206ENST00000496498 RTL1A6NKG5 1358 aa24.85■■□□□ 1.57
NPDC1-206ENST00000496498 A0A0G2JS52 829 aa24.85■■□□□ 1.57
NPDC1-206ENST00000496498 MYT1Q01538 1121 aa24.85■■□□□ 1.57
NPDC1-206ENST00000496498 FAM208AQ9UK61 1670 aaKnown RBP24.85■■□□□ 1.57
NPDC1-206ENST00000496498 TOM1L2Q6ZVM7 507 aa24.83■■□□□ 1.57
NPDC1-206ENST00000496498 PANK3Q9H999 370 aa24.83■■□□□ 1.57
NPDC1-206ENST00000496498 NSD2O96028 1365 aa24.82■■□□□ 1.56
NPDC1-206ENST00000496498 KIF24Q5T7B8 1368 aa24.82■■□□□ 1.56
NPDC1-206ENST00000496498 WNK3Q9BYP7 1800 aa24.82■■□□□ 1.56
NPDC1-206ENST00000496498 KRT27Q7Z3Y8 459 aa24.82■■□□□ 1.56
NPDC1-206ENST00000496498 UPF1Q92900 1129 aaKnown RBP eCLIP24.82■■□□□ 1.56
NPDC1-206ENST00000496498 USP35Q9P2H5 1018 aa24.82■■□□□ 1.56
NPDC1-206ENST00000496498 PARP4Q9UKK3 1724 aaKnown RBP24.82■■□□□ 1.56
NPDC1-206ENST00000496498 ERBB3P21860 1342 aa24.82■■□□□ 1.56
NPDC1-206ENST00000496498 CSB-PGBD3P0DP91 1061 aa24.81■■□□□ 1.56
NPDC1-206ENST00000496498 IP6K1Q92551 441 aa24.81■■□□□ 1.56
NPDC1-206ENST00000496498 CCDC7Q96M83 1385 aa24.8■■□□□ 1.56
NPDC1-206ENST00000496498 CARD10Q9BWT7 1032 aa24.8■■□□□ 1.56
NPDC1-206ENST00000496498 MAP3K19Q56UN5 1328 aa24.8■■□□□ 1.56
NPDC1-206ENST00000496498 CDCA7Q9BWT1 371 aaPredicted RBP24.79■■□□□ 1.56
NPDC1-206ENST00000496498 AMPHP49418 695 aa24.78■■□□□ 1.56
NPDC1-206ENST00000496498 CCDC125Q86Z20 511 aa24.77■■□□□ 1.56
NPDC1-206ENST00000496498 HOXC9P31274 260 aa24.76■■□□□ 1.55
NPDC1-206ENST00000496498 ANKRD24Q8TF21 1146 aa24.76■■□□□ 1.55
NPDC1-206ENST00000496498 KNSTRNQ9Y448 316 aa24.75■■□□□ 1.55
NPDC1-206ENST00000496498 FLT4P35916 1363 aa24.74■■□□□ 1.55
NPDC1-206ENST00000496498 LRRC37A3O60309 1634 aa24.73■■□□□ 1.55
NPDC1-206ENST00000496498 SMG6Q86US8 1419 aaKnown RBP24.73■■□□□ 1.55
NPDC1-206ENST00000496498 WASHC2AQ641Q2 1341 aa24.73■■□□□ 1.55
NPDC1-206ENST00000496498 RRS1Q15050 365 aaKnown RBP24.72■■□□□ 1.55
NPDC1-206ENST00000496498 DISP2A7MBM2 1401 aa24.71■■□□□ 1.55
NPDC1-206ENST00000496498 PDE3BQ13370 1112 aa24.71■■□□□ 1.55
NPDC1-206ENST00000496498 NLRP2Q9NX02 1062 aa24.71■■□□□ 1.55
NPDC1-206ENST00000496498 MAP2P11137 1827 aaKnown RBP24.7■■□□□ 1.55
NPDC1-206ENST00000496498 INSRP06213 1382 aa24.7■■□□□ 1.55
NPDC1-206ENST00000496498 PEAK1Q9H792 1746 aa24.7■■□□□ 1.54
NPDC1-206ENST00000496498 FBLN1P23142 703 aa24.69■■□□□ 1.54
NPDC1-206ENST00000496498 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
NPDC1-206ENST00000496498 RGPD1P0DJD0 1748 aa24.67■■□□□ 1.54
NPDC1-206ENST00000496498 DDB1Q16531 1140 aa24.67■■□□□ 1.54
NPDC1-206ENST00000496498 FAM196AQ6ZSG2 479 aa24.67■■□□□ 1.54
NPDC1-206ENST00000496498 AMER1Q5JTC6 1135 aaPredicted RBP24.65■■□□□ 1.54
NPDC1-206ENST00000496498 NPC1L1Q9UHC9 1359 aa24.65■■□□□ 1.54
NPDC1-206ENST00000496498 OVOS2A0A0G2JMS6 1433 aa24.64■■□□□ 1.54
NPDC1-206ENST00000496498 TNS2Q63HR2 1409 aa24.64■■□□□ 1.54
NPDC1-206ENST00000496498 PER1O15534 1290 aaPredicted RBP24.64■■□□□ 1.54
NPDC1-206ENST00000496498 SF3B2Q13435 895 aaKnown RBP24.64■■□□□ 1.54
NPDC1-206ENST00000496498 MORC1Q86VD1 984 aa24.64■■□□□ 1.54
NPDC1-206ENST00000496498 LTV1Q96GA3 475 aaPredicted RBP24.64■■□□□ 1.54
NPDC1-206ENST00000496498 IL2RBP14784 551 aa24.63■■□□□ 1.53
NPDC1-206ENST00000496498 EMILIN1Q9Y6C2 1016 aa24.63■■□□□ 1.53
NPDC1-206ENST00000496498 EP400Q96L91 3159 aa24.62■■□□□ 1.53
NPDC1-206ENST00000496498 POLKQ9UBT6 870 aa24.62■■□□□ 1.53
NPDC1-206ENST00000496498 RGPD2P0DJD1 1756 aa24.62■■□□□ 1.53
NPDC1-206ENST00000496498 EXOC5O00471 708 aa24.61■■□□□ 1.53
NPDC1-206ENST00000496498 HSP90AB2PQ58FF8 381 aa24.61■■□□□ 1.53
NPDC1-206ENST00000496498 BCL9O00512 1426 aa24.61■■□□□ 1.53
NPDC1-206ENST00000496498 TNS1Q9HBL0 1735 aaKnown RBP24.59■■□□□ 1.53
NPDC1-206ENST00000496498 PPM1GO15355 546 aaPredicted RBP24.59■■□□□ 1.53
NPDC1-206ENST00000496498 TNNT2P45379 298 aaPredicted RBP24.58■■□□□ 1.53
NPDC1-206ENST00000496498 FAM182BQ5T319 152 aa24.57■■□□□ 1.52
NPDC1-206ENST00000496498 NCAPD2Q15021 1401 aa24.55■■□□□ 1.52
NPDC1-206ENST00000496498 BAG6P46379 1132 aa24.55■■□□□ 1.52
NPDC1-206ENST00000496498 NBPF6Q5VWK0 638 aa24.55■■□□□ 1.52
NPDC1-206ENST00000496498 NBPF4Q96M43 638 aa24.55■■□□□ 1.52
NPDC1-206ENST00000496498 SBF2Q86WG5 1849 aa24.54■■□□□ 1.52
NPDC1-206ENST00000496498 MARCH10Q8NA82 808 aaPredicted RBP24.53■■□□□ 1.52
NPDC1-206ENST00000496498 RAPGEF4Q8WZA2 1011 aa24.52■■□□□ 1.52
NPDC1-206ENST00000496498 PLEKHG2Q9H7P9 1386 aa24.51■■□□□ 1.51
NPDC1-206ENST00000496498 MEGF6O75095 1541 aa24.51■■□□□ 1.51
NPDC1-206ENST00000496498 TRIM37O94972 964 aa24.5■■□□□ 1.51
NPDC1-206ENST00000496498 CC2D1BQ5T0F9 858 aaKnown RBP24.5■■□□□ 1.51
NPDC1-206ENST00000496498 PARD3Q8TEW0 1356 aa24.49■■□□□ 1.51
NPDC1-206ENST00000496498 TATP17735 454 aaPredicted RBP24.48■■□□□ 1.51
NPDC1-206ENST00000496498 RGPD3A6NKT7 1758 aaPredicted RBP24.47■■□□□ 1.51
NPDC1-206ENST00000496498 RGPD4Q7Z3J3 1758 aa24.47■■□□□ 1.51
NPDC1-206ENST00000496498 SHANK3Q9BYB0 1731 aa24.47■■□□□ 1.51
NPDC1-206ENST00000496498 EIF4A2Q14240 407 aaKnown RBP24.47■■□□□ 1.51
NPDC1-206ENST00000496498 NHSQ6T4R5 1651 aa24.46■■□□□ 1.51
NPDC1-206ENST00000496498 USHBP1Q8N6Y0 703 aa24.46■■□□□ 1.51
NPDC1-206ENST00000496498 ZCRB1Q8TBF4 217 aaKnown RBP24.46■■□□□ 1.51
NPDC1-206ENST00000496498 PKD1L3Q7Z443 1732 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms