RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 AMPHP49418 695 aa24.83■■□□□ 1.57
TSSC4-210ENST00000496468 BLMP54132 1417 aaPredicted RBP24.83■■□□□ 1.57
TSSC4-210ENST00000496468 RGPD5Q99666 1765 aa24.82■■□□□ 1.56
TSSC4-210ENST00000496468 SLIT2O94813 1529 aa24.82■■□□□ 1.56
TSSC4-210ENST00000496468 DIEXFQ68CQ4 756 aaKnown RBP24.82■■□□□ 1.56
TSSC4-210ENST00000496468 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.82■■□□□ 1.56
TSSC4-210ENST00000496468 POLKQ9UBT6 870 aa24.82■■□□□ 1.56
TSSC4-210ENST00000496468 FAM83GA6ND36 823 aa24.81■■□□□ 1.56
TSSC4-210ENST00000496468 PPM1GO15355 546 aaPredicted RBP24.81■■□□□ 1.56
TSSC4-210ENST00000496468 CAMTA1Q9Y6Y1 1673 aa24.81■■□□□ 1.56
TSSC4-210ENST00000496468 MYBBP1AQ9BQG0 1328 aaKnown RBP24.81■■□□□ 1.56
TSSC4-210ENST00000496468 PPP2R1AP30153 589 aa24.8■■□□□ 1.56
TSSC4-210ENST00000496468 COL5A2P05997 1499 aaPredicted RBP24.8■■□□□ 1.56
TSSC4-210ENST00000496468 FAM208AQ9UK61 1670 aaKnown RBP24.79■■□□□ 1.56
TSSC4-210ENST00000496468 HOXC9P31274 260 aa24.79■■□□□ 1.56
TSSC4-210ENST00000496468 IP6K1Q92551 441 aa24.78■■□□□ 1.56
TSSC4-210ENST00000496468 NGLY1Q96IV0 654 aa24.78■■□□□ 1.56
TSSC4-210ENST00000496468 MTHFSP49914 203 aa24.76■■□□□ 1.55
TSSC4-210ENST00000496468 BTG4Q9NY30 223 aa24.76■■□□□ 1.55
TSSC4-210ENST00000496468 AFF2P51816 1311 aa24.76■■□□□ 1.55
TSSC4-210ENST00000496468 INSRP06213 1382 aa24.76■■□□□ 1.55
TSSC4-210ENST00000496468 COL3A1P02461 1466 aaPredicted RBP24.75■■□□□ 1.55
TSSC4-210ENST00000496468 AXIN2Q9Y2T1 843 aa24.74■■□□□ 1.55
TSSC4-210ENST00000496468 BCL9LQ86UU0 1499 aa24.73■■□□□ 1.55
TSSC4-210ENST00000496468 ERBB3P21860 1342 aa24.73■■□□□ 1.55
TSSC4-210ENST00000496468 FNBP4Q8N3X1 1017 aaPredicted RBP24.73■■□□□ 1.55
TSSC4-210ENST00000496468 HSP90AB2PQ58FF8 381 aa24.72■■□□□ 1.55
TSSC4-210ENST00000496468 CFAP53Q96M91 514 aa24.71■■□□□ 1.55
TSSC4-210ENST00000496468 STRN4Q9NRL3 753 aa24.71■■□□□ 1.55
TSSC4-210ENST00000496468 ANKRD24Q8TF21 1146 aa24.7■■□□□ 1.54
TSSC4-210ENST00000496468 USP21Q9UK80 565 aa24.7■■□□□ 1.54
TSSC4-210ENST00000496468 CSB-PGBD3P0DP91 1061 aa24.69■■□□□ 1.54
TSSC4-210ENST00000496468 UNC5CLQ8IV45 518 aa24.69■■□□□ 1.54
TSSC4-210ENST00000496468 LTV1Q96GA3 475 aaPredicted RBP24.69■■□□□ 1.54
TSSC4-210ENST00000496468 WDR17Q8IZU2 1322 aa24.68■■□□□ 1.54
TSSC4-210ENST00000496468 EVA1CP58658 441 aa24.68■■□□□ 1.54
TSSC4-210ENST00000496468 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
TSSC4-210ENST00000496468 RGPD2P0DJD1 1756 aa24.67■■□□□ 1.54
TSSC4-210ENST00000496468 CRB1P82279 1406 aa24.67■■□□□ 1.54
TSSC4-210ENST00000496468 RGPD1P0DJD0 1748 aa24.66■■□□□ 1.54
TSSC4-210ENST00000496468 EIF4A2Q14240 407 aaKnown RBP24.66■■□□□ 1.54
TSSC4-210ENST00000496468 ATRNO75882 1429 aa24.66■■□□□ 1.54
TSSC4-210ENST00000496468 WNK3Q9BYP7 1800 aa24.65■■□□□ 1.54
TSSC4-210ENST00000496468 ZNF772Q68DY9 489 aaPredicted RBP24.64■■□□□ 1.54
TSSC4-210ENST00000496468 LARP1Q6PKG0 1096 aaKnown RBP24.64■■□□□ 1.54
TSSC4-210ENST00000496468 DIAPH1O60610 1272 aaKnown RBP24.63■■□□□ 1.53
TSSC4-210ENST00000496468 TOM1L2Q6ZVM7 507 aa24.63■■□□□ 1.53
TSSC4-210ENST00000496468 VPS72Q15906 364 aa24.62■■□□□ 1.53
TSSC4-210ENST00000496468 NLRP2Q9NX02 1062 aa24.61■■□□□ 1.53
TSSC4-210ENST00000496468 TRPC5Q9UL62 973 aaPredicted RBP24.61■■□□□ 1.53
TSSC4-210ENST00000496468 CCDC9Q9Y3X0 531 aaKnown RBP24.61■■□□□ 1.53
TSSC4-210ENST00000496468 GLI3P10071 1580 aa24.6■■□□□ 1.53
TSSC4-210ENST00000496468 IL13P35225 146 aa24.6■■□□□ 1.53
TSSC4-210ENST00000496468 NCAPD2Q15021 1401 aa24.6■■□□□ 1.53
TSSC4-210ENST00000496468 SPATA31A5Q5VU36 1347 aa24.59■■□□□ 1.53
TSSC4-210ENST00000496468 SPATA31A7Q8IWB4 1347 aa24.59■■□□□ 1.53
TSSC4-210ENST00000496468 IGSF1Q8N6C5 1336 aa24.58■■□□□ 1.52
TSSC4-210ENST00000496468 CARD10Q9BWT7 1032 aa24.57■■□□□ 1.52
TSSC4-210ENST00000496468 MRS2Q9HD23 443 aa24.57■■□□□ 1.52
TSSC4-210ENST00000496468 NUDCQ9Y266 331 aa24.57■■□□□ 1.52
TSSC4-210ENST00000496468 PARP4Q9UKK3 1724 aaKnown RBP24.57■■□□□ 1.52
TSSC4-210ENST00000496468 SPATA31A1Q5TZJ5 1347 aa24.57■■□□□ 1.52
TSSC4-210ENST00000496468 USP35Q9P2H5 1018 aa24.56■■□□□ 1.52
TSSC4-210ENST00000496468 U2SURPO15042 1029 aaKnown RBP24.55■■□□□ 1.52
TSSC4-210ENST00000496468 NBPF6Q5VWK0 638 aa24.55■■□□□ 1.52
TSSC4-210ENST00000496468 USHBP1Q8N6Y0 703 aa24.55■■□□□ 1.52
TSSC4-210ENST00000496468 NBPF4Q96M43 638 aa24.55■■□□□ 1.52
TSSC4-210ENST00000496468 EYA1Q99502 592 aa24.55■■□□□ 1.52
TSSC4-210ENST00000496468 QTRT2Q9H974 415 aaKnown RBP24.55■■□□□ 1.52
TSSC4-210ENST00000496468 MIER1Q8N108 512 aa24.54■■□□□ 1.52
TSSC4-210ENST00000496468 RGS17Q9UGC6 210 aaPredicted RBP24.54■■□□□ 1.52
TSSC4-210ENST00000496468 CCDC184Q52MB2 194 aa24.53■■□□□ 1.52
TSSC4-210ENST00000496468 TCP11L2Q8N4U5 519 aa24.53■■□□□ 1.52
TSSC4-210ENST00000496468 GJD4Q96KN9 370 aaPredicted RBP24.53■■□□□ 1.52
TSSC4-210ENST00000496468 THSD7AQ9UPZ6 1657 aa24.53■■□□□ 1.52
TSSC4-210ENST00000496468 THRAP3Q9Y2W1 955 aaKnown RBP24.52■■□□□ 1.52
TSSC4-210ENST00000496468 KDRP35968 1356 aa24.52■■□□□ 1.52
TSSC4-210ENST00000496468 MEGF6O75095 1541 aa24.51■■□□□ 1.51
TSSC4-210ENST00000496468 LRRC37A3O60309 1634 aa24.51■■□□□ 1.51
TSSC4-210ENST00000496468 CCER2I3L3R5 266 aa24.51■■□□□ 1.51
TSSC4-210ENST00000496468 WDR43Q15061 677 aaKnown RBP eCLIP24.51■■□□□ 1.51
TSSC4-210ENST00000496468 DISP2A7MBM2 1401 aa24.51■■□□□ 1.51
TSSC4-210ENST00000496468 U2AF1L5P0DN76 240 aaPredicted RBP24.49■■□□□ 1.51
TSSC4-210ENST00000496468 U2AF1Q01081 240 aaKnown RBP eCLIP24.49■■□□□ 1.51
TSSC4-210ENST00000496468 SULT6B1Q6IMI4 303 aa24.49■■□□□ 1.51
TSSC4-210ENST00000496468 BARGINQ6ZT62 677 aa24.48■■□□□ 1.51
TSSC4-210ENST00000496468 AEBP1Q8IUX7 1158 aa24.48■■□□□ 1.51
TSSC4-210ENST00000496468 PKD1L3Q7Z443 1732 aa24.47■■□□□ 1.51
TSSC4-210ENST00000496468 OVOS2A0A0G2JMS6 1433 aa24.47■■□□□ 1.51
TSSC4-210ENST00000496468 HMOX1P09601 288 aa24.47■■□□□ 1.51
TSSC4-210ENST00000496468 RBM6P78332 1123 aaKnown RBP24.47■■□□□ 1.51
TSSC4-210ENST00000496468 FAM98CQ17RN3 349 aaKnown RBP24.47■■□□□ 1.51
TSSC4-210ENST00000496468 POTEAQ6S8J7 498 aa24.47■■□□□ 1.51
TSSC4-210ENST00000496468 RAPGEF4Q8WZA2 1011 aa24.47■■□□□ 1.51
TSSC4-210ENST00000496468 IL2RBP14784 551 aa24.46■■□□□ 1.51
TSSC4-210ENST00000496468 TNS2Q63HR2 1409 aa24.45■■□□□ 1.51
TSSC4-210ENST00000496468 PLEKHG2Q9H7P9 1386 aa24.45■■□□□ 1.5
TSSC4-210ENST00000496468 A0A0G2JS52 829 aa24.45■■□□□ 1.5
TSSC4-210ENST00000496468 MYT1Q01538 1121 aa24.45■■□□□ 1.5
TSSC4-210ENST00000496468 CDCA7Q9BWT1 371 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms