RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.03□□□□□ -0.962e-6■■□□□ 13.3
CLK1-214ENST00000496205 ERFEQ4G0M1 354 aa9.03□□□□□ -0.96
CLK1-214ENST00000496205 CNTNAP3BQ96NU0 1288 aa9.03□□□□□ -0.96
CLK1-214ENST00000496205 CNTNAP3Q9BZ76 1288 aa9.03□□□□□ -0.96
CLK1-214ENST00000496205 SUZ12Q15022 739 aaKnown RBP9.02□□□□□ -0.97
CLK1-214ENST00000496205 PPP1R26Q5T8A7 1209 aaPredicted RBP9.02□□□□□ -0.97
CLK1-214ENST00000496205 HELBQ8NG08 1087 aaPredicted RBP9.01□□□□□ -0.97
CLK1-214ENST00000496205 CTDSPL2Q05D32 466 aa9□□□□□ -0.97
CLK1-214ENST00000496205 Q6ZVU0 165 aa9□□□□□ -0.97
CLK1-214ENST00000496205 COL25A1Q9BXS0 654 aaPredicted RBP9□□□□□ -0.97
CLK1-214ENST00000496205 ADAMTS8Q9UP79 889 aa9□□□□□ -0.97
CLK1-214ENST00000496205 SPINT1O43278 529 aa8.99□□□□□ -0.97
CLK1-214ENST00000496205 RNFT1Q5M7Z0 435 aa8.99□□□□□ -0.97
CLK1-214ENST00000496205 CCDC155Q8N6L0 562 aa8.99□□□□□ -0.97
CLK1-214ENST00000496205 CLK2P49760 499 aaKnown RBP8.98□□□□□ -0.97
CLK1-214ENST00000496205 NANOS1Q8WY41 292 aaKnown RBP8.98□□□□□ -0.97
CLK1-214ENST00000496205 POLR3EQ9NVU0 708 aa8.98□□□□□ -0.97
CLK1-214ENST00000496205 RASSF7Q02833 373 aa8.97□□□□□ -0.97
CLK1-214ENST00000496205 GPKOWQ92917 476 aaPredicted RBP eCLIP8.97□□□□□ -0.97
CLK1-214ENST00000496205 SLC35F4A4IF30 521 aa8.96□□□□□ -0.98
CLK1-214ENST00000496205 FBXO31Q5XUX0 539 aaPredicted RBP8.96□□□□□ -0.98
CLK1-214ENST00000496205 ZNF385CQ66K41 422 aaPredicted RBP8.96□□□□□ -0.98
CLK1-214ENST00000496205 TMEM151AQ8N4L1 468 aa8.96□□□□□ -0.98
CLK1-214ENST00000496205 WHAMMQ8TF30 809 aa8.96□□□□□ -0.98
CLK1-214ENST00000496205 AGBL1Q96MI9 1066 aa8.96□□□□□ -0.98
CLK1-214ENST00000496205 KCTD15Q96SI1 283 aaPredicted RBP8.96□□□□□ -0.98
CLK1-214ENST00000496205 PGPEP1Q9NXJ5 209 aa8.96□□□□□ -0.98
CLK1-214ENST00000496205 GDF11O95390 407 aa8.95□□□□□ -0.98
CLK1-214ENST00000496205 CTSOP43234 321 aaPredicted RBP8.95□□□□□ -0.98
CLK1-214ENST00000496205 PDXDC2PQ6P474 469 aa8.95□□□□□ -0.98
CLK1-214ENST00000496205 LRRN4Q8WUT4 740 aa8.95□□□□□ -0.98
CLK1-214ENST00000496205 ARHGAP9Q9BRR9 750 aa8.95□□□□□ -0.98
CLK1-214ENST00000496205 VWA5B2Q8N398 1253 aa8.94□□□□□ -0.98
CLK1-214ENST00000496205 OCSTAMPQ9BR26 566 aa8.94□□□□□ -0.98
CLK1-214ENST00000496205 SLC24A3Q9HC58 644 aa8.94□□□□□ -0.98
CLK1-214ENST00000496205 FKBPLQ9UIM3 349 aa8.93□□□□□ -0.98
CLK1-214ENST00000496205 ITGA6P23229 1130 aa8.92□□□□□ -0.98
CLK1-214ENST00000496205 RELBQ01201 579 aa8.92□□□□□ -0.98
CLK1-214ENST00000496205 INTS6LQ5JSJ4 861 aaKnown RBP8.92□□□□□ -0.98
CLK1-214ENST00000496205 INSM2Q96T92 566 aaPredicted RBP8.92□□□□□ -0.98
CLK1-214ENST00000496205 SLURP2P0DP57 97 aa8.91□□□□□ -0.98
CLK1-214ENST00000496205 NR6A1Q15406 480 aa8.91□□□□□ -0.98
CLK1-214ENST00000496205 SVOPQ8N4V2 548 aa8.91□□□□□ -0.98
CLK1-214ENST00000496205 SLC10A4Q96EP9 437 aa8.91□□□□□ -0.98
CLK1-214ENST00000496205 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
CLK1-214ENST00000496205 ARHGEF15O94989 841 aa8.9□□□□□ -0.98
CLK1-214ENST00000496205 ZBTB33Q86T24 672 aa8.9□□□□□ -0.98
CLK1-214ENST00000496205 SENP3-EIF4A1A0A087X0R7 540 aa8.89□□□□□ -0.99
CLK1-214ENST00000496205 CDC14CA4D256 554 aa8.89□□□□□ -0.99
CLK1-214ENST00000496205 DHX9Q08211 1270 aaKnown RBP8.89□□□□□ -0.99
CLK1-214ENST00000496205 ZNF395Q9H8N7 513 aaPredicted RBP8.89□□□□□ -0.99
CLK1-214ENST00000496205 TMPRSS4Q9NRS4 437 aa8.89□□□□□ -0.99
CLK1-214ENST00000496205 SV2AQ7L0J3 742 aa8.88□□□□□ -0.99
CLK1-214ENST00000496205 RNF217Q8TC41 542 aa8.88□□□□□ -0.99
CLK1-214ENST00000496205 POLMQ9NP87 494 aaPredicted RBP8.88□□□□□ -0.99
CLK1-214ENST00000496205 CDV3Q9UKY7 258 aaKnown RBP8.88□□□□□ -0.99
CLK1-214ENST00000496205 RNF225M0QZC1 329 aaPredicted RBP8.87□□□□□ -0.99
CLK1-214ENST00000496205 ADD1P35611 737 aaKnown RBP8.87□□□□□ -0.99
CLK1-214ENST00000496205 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
CLK1-214ENST00000496205 ADAM32Q8TC27 787 aa8.87□□□□□ -0.99
CLK1-214ENST00000496205 IRS1P35568 1242 aa8.86□□□□□ -0.99
CLK1-214ENST00000496205 KDF1Q8NAX2 398 aaPredicted RBP8.86□□□□□ -0.99
CLK1-214ENST00000496205 EPS8L1Q8TE68 723 aa8.86□□□□□ -0.99
CLK1-214ENST00000496205 ZNF784Q8NCA9 323 aaPredicted RBP8.85□□□□□ -0.99
CLK1-214ENST00000496205 CUEDC1Q9NWM3 386 aaPredicted RBP8.85□□□□□ -0.99
CLK1-214ENST00000496205 ZC3H4Q9UPT8 1303 aaKnown RBP8.84□□□□□ -0.99
CLK1-214ENST00000496205 LILRA1O75019 489 aa8.84□□□□□ -0.99
CLK1-214ENST00000496205 RAB15P59190 212 aa8.84□□□□□ -0.99
CLK1-214ENST00000496205 PTK2Q05397 1052 aa8.84□□□□□ -0.99
CLK1-214ENST00000496205 FOXD4L5Q5VV16 416 aaPredicted RBP8.84□□□□□ -0.99
CLK1-214ENST00000496205 LYPD4Q6UWN0 246 aa8.84□□□□□ -0.99
CLK1-214ENST00000496205 SKIV2LQ15477 1246 aaKnown RBP8.83□□□□□ -1
CLK1-214ENST00000496205 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.83□□□□□ -1
CLK1-214ENST00000496205 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
CLK1-214ENST00000496205 ADAMTS2O95450 1211 aa8.82□□□□□ -1
CLK1-214ENST00000496205 ADH1AP07327 375 aa8.82□□□□□ -1
CLK1-214ENST00000496205 PPP2R2DQ66LE6 453 aa8.82□□□□□ -1
CLK1-214ENST00000496205 GPAT2Q6NUI2 795 aa8.82□□□□□ -1
CLK1-214ENST00000496205 GPSM3Q9Y4H4 160 aa8.82□□□□□ -1
CLK1-214ENST00000496205 PTGIRP43119 386 aa8.81□□□□□ -1
CLK1-214ENST00000496205 GAS6Q14393 721 aa8.81□□□□□ -1
CLK1-214ENST00000496205 AP1G2O75843 785 aa8.8□□□□□ -1
CLK1-214ENST00000496205 MARSP56192 900 aaKnown RBP8.8□□□□□ -1
CLK1-214ENST00000496205 HMX1Q9NP08 348 aaPredicted RBP8.8□□□□□ -1
CLK1-214ENST00000496205 DNMT3AQ9Y6K1 912 aaPredicted RBP8.8□□□□□ -1
CLK1-214ENST00000496205 NBPF20Q3BBV1 942 aa8.79□□□□□ -1
CLK1-214ENST00000496205 SH3D19Q5HYK7 790 aa8.79□□□□□ -1
CLK1-214ENST00000496205 ESPNB1AK53 854 aa8.78□□□□□ -1
CLK1-214ENST00000496205 CELA2BP08218 269 aaPredicted RBP8.78□□□□□ -1
CLK1-214ENST00000496205 SRSF11Q05519 484 aaKnown RBP8.78□□□□□ -1
CLK1-214ENST00000496205 LYSMD3Q7Z3D4 306 aa8.78□□□□□ -1
CLK1-214ENST00000496205 RHOQP17081 205 aa8.77□□□□□ -1.01
CLK1-214ENST00000496205 PRICKLE2Q7Z3G6 844 aa8.77□□□□□ -1.01
CLK1-214ENST00000496205 DZIP3Q86Y13 1208 aaKnown RBP8.77□□□□□ -1.01
CLK1-214ENST00000496205 FAM117AQ9C073 453 aa8.77□□□□□ -1.01
CLK1-214ENST00000496205 KANK3Q6NY19 840 aa8.76□□□□□ -1.01
CLK1-214ENST00000496205 SCARF2Q96GP6 870 aaPredicted RBP8.76□□□□□ -1.01
CLK1-214ENST00000496205 GPBP1L1Q9HC44 474 aaPredicted RBP8.76□□□□□ -1.01
CLK1-214ENST00000496205 CYLDQ9NQC7 956 aa8.75□□□□□ -1.01
CLK1-214ENST00000496205 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms