RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 CDK12Q9NYV4 1490 aaPredicted RBP29.28■■■□□ 2.28
ECHDC3-205ENST00000496136 CHRNA2Q15822 529 aa29.27■■■□□ 2.28
ECHDC3-205ENST00000496136 PRDM11Q9NQV5 511 aa29.27■■■□□ 2.28
ECHDC3-205ENST00000496136 SPATA31A6Q5VVP1 1343 aa29.27■■■□□ 2.28
ECHDC3-205ENST00000496136 AXIN2Q9Y2T1 843 aa29.26■■■□□ 2.27
ECHDC3-205ENST00000496136 RTL1A6NKG5 1358 aa29.25■■■□□ 2.27
ECHDC3-205ENST00000496136 FAM83GA6ND36 823 aa29.25■■■□□ 2.27
ECHDC3-205ENST00000496136 ADAMTS2O95450 1211 aa29.24■■■□□ 2.27
ECHDC3-205ENST00000496136 COL18A1P39060 1754 aa29.23■■■□□ 2.27
ECHDC3-205ENST00000496136 COL3A1P02461 1466 aaPredicted RBP29.23■■■□□ 2.27
ECHDC3-205ENST00000496136 DIAPH1O60610 1272 aaKnown RBP29.22■■■□□ 2.27
ECHDC3-205ENST00000496136 PNISRQ8TF01 805 aaKnown RBP29.22■■■□□ 2.27
ECHDC3-205ENST00000496136 RGPD5Q99666 1765 aa29.2■■■□□ 2.26
ECHDC3-205ENST00000496136 IL13P35225 146 aa29.19■■■□□ 2.26
ECHDC3-205ENST00000496136 EIF4A2Q14240 407 aaKnown RBP29.19■■■□□ 2.26
ECHDC3-205ENST00000496136 BLMP54132 1417 aaPredicted RBP29.18■■■□□ 2.26
ECHDC3-205ENST00000496136 ILDR2Q71H61 639 aa29.18■■■□□ 2.26
ECHDC3-205ENST00000496136 LTV1Q96GA3 475 aaPredicted RBP29.16■■■□□ 2.26
ECHDC3-205ENST00000496136 ABCC6O95255 1503 aa29.16■■■□□ 2.26
ECHDC3-205ENST00000496136 NUDCQ9Y266 331 aa29.16■■■□□ 2.26
ECHDC3-205ENST00000496136 CAMTA1Q9Y6Y1 1673 aa29.15■■■□□ 2.26
ECHDC3-205ENST00000496136 LMO7Q8WWI1 1683 aa29.15■■■□□ 2.26
ECHDC3-205ENST00000496136 LRP6O75581 1613 aa29.14■■■□□ 2.26
ECHDC3-205ENST00000496136 ANKRD24Q8TF21 1146 aa29.14■■■□□ 2.26
ECHDC3-205ENST00000496136 FAM9BQ8IZU0 186 aa29.13■■■□□ 2.25
ECHDC3-205ENST00000496136 COL14A1Q05707 1796 aaKnown RBP29.13■■■□□ 2.25
ECHDC3-205ENST00000496136 BTG4Q9NY30 223 aa29.13■■■□□ 2.25
ECHDC3-205ENST00000496136 ERBB3P21860 1342 aa29.12■■■□□ 2.25
ECHDC3-205ENST00000496136 U2SURPO15042 1029 aaKnown RBP29.12■■■□□ 2.25
ECHDC3-205ENST00000496136 WDR43Q15061 677 aaKnown RBP eCLIP29.12■■■□□ 2.25
ECHDC3-205ENST00000496136 ADAMTS8Q9UP79 889 aa29.11■■■□□ 2.25
ECHDC3-205ENST00000496136 SOCS7O14512 581 aa29.11■■■□□ 2.25
ECHDC3-205ENST00000496136 U2AF1L5P0DN76 240 aaPredicted RBP29.09■■■□□ 2.25
ECHDC3-205ENST00000496136 U2AF1Q01081 240 aaKnown RBP eCLIP29.09■■■□□ 2.25
ECHDC3-205ENST00000496136 EYA1Q99502 592 aa29.09■■■□□ 2.25
ECHDC3-205ENST00000496136 C8orf37Q96NL8 207 aa29.08■■■□□ 2.25
ECHDC3-205ENST00000496136 NGLY1Q96IV0 654 aa29.08■■■□□ 2.25
ECHDC3-205ENST00000496136 COL5A2P05997 1499 aaPredicted RBP29.07■■■□□ 2.24
ECHDC3-205ENST00000496136 EVA1CP58658 441 aa29.07■■■□□ 2.24
ECHDC3-205ENST00000496136 NBPF6Q5VWK0 638 aa29.07■■■□□ 2.24
ECHDC3-205ENST00000496136 NBPF4Q96M43 638 aa29.07■■■□□ 2.24
ECHDC3-205ENST00000496136 CSB-PGBD3P0DP91 1061 aa29.06■■■□□ 2.24
ECHDC3-205ENST00000496136 MEX3CQ5U5Q3 659 aaKnown RBP29.06■■■□□ 2.24
ECHDC3-205ENST00000496136 STRN4Q9NRL3 753 aa29.06■■■□□ 2.24
ECHDC3-205ENST00000496136 PLCH1Q4KWH8 1693 aa29.04■■■□□ 2.24
ECHDC3-205ENST00000496136 IGSF1Q8N6C5 1336 aa29.04■■■□□ 2.24
ECHDC3-205ENST00000496136 RGPD2P0DJD1 1756 aa29.04■■■□□ 2.24
ECHDC3-205ENST00000496136 SLIT2O94813 1529 aa29.04■■■□□ 2.24
ECHDC3-205ENST00000496136 RGPD1P0DJD0 1748 aa29.04■■■□□ 2.24
ECHDC3-205ENST00000496136 WDR17Q8IZU2 1322 aa29.04■■■□□ 2.24
ECHDC3-205ENST00000496136 FNBP4Q8N3X1 1017 aaPredicted RBP29.03■■■□□ 2.24
ECHDC3-205ENST00000496136 HMOX1P09601 288 aa29.03■■■□□ 2.24
ECHDC3-205ENST00000496136 SULT6B1Q6IMI4 303 aa29.02■■■□□ 2.24
ECHDC3-205ENST00000496136 NLRP2Q9NX02 1062 aa29.02■■■□□ 2.24
ECHDC3-205ENST00000496136 LARP1Q6PKG0 1096 aaKnown RBP29.01■■■□□ 2.23
ECHDC3-205ENST00000496136 FCHSD2O94868 740 aa29.01■■■□□ 2.23
ECHDC3-205ENST00000496136 AEBP1Q8IUX7 1158 aa29.01■■■□□ 2.23
ECHDC3-205ENST00000496136 NWD2Q9ULI1 1742 aa29■■■□□ 2.23
ECHDC3-205ENST00000496136 TOM1L2Q6ZVM7 507 aa29■■■□□ 2.23
ECHDC3-205ENST00000496136 USHBP1Q8N6Y0 703 aa29■■■□□ 2.23
ECHDC3-205ENST00000496136 UNC5CLQ8IV45 518 aa28.98■■■□□ 2.23
ECHDC3-205ENST00000496136 RSPH6AQ9H0K4 717 aa28.98■■■□□ 2.23
ECHDC3-205ENST00000496136 KDRP35968 1356 aa28.97■■■□□ 2.23
ECHDC3-205ENST00000496136 FAM208AQ9UK61 1670 aaKnown RBP28.97■■■□□ 2.23
ECHDC3-205ENST00000496136 BCL9LQ86UU0 1499 aa28.97■■■□□ 2.23
ECHDC3-205ENST00000496136 NRAPQ86VF7 1730 aa28.96■■■□□ 2.23
ECHDC3-205ENST00000496136 CARD10Q9BWT7 1032 aa28.96■■■□□ 2.23
ECHDC3-205ENST00000496136 CCDC146Q8IYE0 955 aa28.95■■■□□ 2.22
ECHDC3-205ENST00000496136 PLEKHF1Q96S99 279 aa28.95■■■□□ 2.22
ECHDC3-205ENST00000496136 USP21Q9UK80 565 aa28.95■■■□□ 2.22
ECHDC3-205ENST00000496136 CRB1P82279 1406 aa28.95■■■□□ 2.22
ECHDC3-205ENST00000496136 NCAPD2Q15021 1401 aa28.95■■■□□ 2.22
ECHDC3-205ENST00000496136 PRKAR2BP31323 418 aa28.94■■■□□ 2.22
ECHDC3-205ENST00000496136 AFF2P51816 1311 aa28.93■■■□□ 2.22
ECHDC3-205ENST00000496136 PNNQ9H307 717 aaKnown RBP28.93■■■□□ 2.22
ECHDC3-205ENST00000496136 RUNDC1Q96C34 613 aa28.92■■■□□ 2.22
ECHDC3-205ENST00000496136 USP35Q9P2H5 1018 aa28.91■■■□□ 2.22
ECHDC3-205ENST00000496136 PHACTR3Q96KR7 559 aa28.89■■■□□ 2.22
ECHDC3-205ENST00000496136 VPS72Q15906 364 aa28.88■■■□□ 2.21
ECHDC3-205ENST00000496136 SPATA31A1Q5TZJ5 1347 aa28.87■■■□□ 2.21
ECHDC3-205ENST00000496136 SPATA31A5Q5VU36 1347 aa28.87■■■□□ 2.21
ECHDC3-205ENST00000496136 SPATA31A7Q8IWB4 1347 aa28.87■■■□□ 2.21
ECHDC3-205ENST00000496136 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.87■■■□□ 2.21
ECHDC3-205ENST00000496136 CCDC9Q9Y3X0 531 aaKnown RBP28.85■■■□□ 2.21
ECHDC3-205ENST00000496136 APAF1O14727 1248 aa28.85■■■□□ 2.21
ECHDC3-205ENST00000496136 NEFMP07197 916 aa28.85■■■□□ 2.21
ECHDC3-205ENST00000496136 RAPGEF4Q8WZA2 1011 aa28.85■■■□□ 2.21
ECHDC3-205ENST00000496136 SENP3-EIF4A1A0A087X0R7 540 aa28.84■■■□□ 2.21
ECHDC3-205ENST00000496136 TCP11L2Q8N4U5 519 aa28.84■■■□□ 2.21
ECHDC3-205ENST00000496136 MAPK8IP3Q9UPT6 1336 aa28.84■■■□□ 2.21
ECHDC3-205ENST00000496136 THRAP3Q9Y2W1 955 aaKnown RBP28.82■■■□□ 2.2
ECHDC3-205ENST00000496136 IL2RBP14784 551 aa28.81■■■□□ 2.2
ECHDC3-205ENST00000496136 TATP17735 454 aaPredicted RBP28.81■■■□□ 2.2
ECHDC3-205ENST00000496136 TRPC5Q9UL62 973 aaPredicted RBP28.81■■■□□ 2.2
ECHDC3-205ENST00000496136 MEGF6O75095 1541 aa28.8■■■□□ 2.2
ECHDC3-205ENST00000496136 QTRT2Q9H974 415 aaKnown RBP28.8■■■□□ 2.2
ECHDC3-205ENST00000496136 HNRNPUQ00839 825 aaKnown RBP eCLIP28.79■■■□□ 2.2
ECHDC3-205ENST00000496136 YTHDC1Q96MU7 727 aaKnown RBP28.79■■■□□ 2.2
ECHDC3-205ENST00000496136 TMPOP42166 694 aaKnown RBP28.78■■■□□ 2.2
ECHDC3-205ENST00000496136 MTHFSDQ2M296 383 aaKnown RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms