RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SHANK3Q9BYB0 1731 aa14.54□□□□□ -0.08
SMARCAL1-213ENST00000496037 ANKRD30BQ9BXX2 1392 aa14.53□□□□□ -0.08
SMARCAL1-213ENST00000496037 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
SMARCAL1-213ENST00000496037 THRAP3Q9Y2W1 955 aaKnown RBP14.53□□□□□ -0.08
SMARCAL1-213ENST00000496037 PIK3C2GO75747 1445 aa14.52□□□□□ -0.08
SMARCAL1-213ENST00000496037 EIF3AQ14152 1382 aaKnown RBP14.52□□□□□ -0.08
SMARCAL1-213ENST00000496037 LOC105371045A0A1W2PR82 267 aa14.52□□□□□ -0.09
SMARCAL1-213ENST00000496037 HSPA6P17066 643 aa14.52□□□□□ -0.09
SMARCAL1-213ENST00000496037 ZC3H6P61129 1189 aaKnown RBP14.52□□□□□ -0.09
SMARCAL1-213ENST00000496037 LARP1Q6PKG0 1096 aaKnown RBP14.52□□□□□ -0.09
SMARCAL1-213ENST00000496037 SGIP1Q9BQI5 828 aa14.52□□□□□ -0.09
SMARCAL1-213ENST00000496037 PARP4Q9UKK3 1724 aaKnown RBP14.52□□□□□ -0.09
SMARCAL1-213ENST00000496037 SLC15A2Q16348 729 aa14.51□□□□□ -0.09
SMARCAL1-213ENST00000496037 PRAM1Q96QH2 718 aa14.51□□□□□ -0.09
SMARCAL1-213ENST00000496037 PHRF1Q9P1Y6 1649 aaKnown RBP14.51□□□□□ -0.09
SMARCAL1-213ENST00000496037 DHX57Q6P158 1386 aaKnown RBP14.5□□□□□ -0.09
SMARCAL1-213ENST00000496037 KLHL34Q8N239 644 aa14.5□□□□□ -0.09
SMARCAL1-213ENST00000496037 NGDNQ8NEJ9 315 aaKnown RBP14.5□□□□□ -0.09
SMARCAL1-213ENST00000496037 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
SMARCAL1-213ENST00000496037 RGL3Q3MIN7 710 aa14.49□□□□□ -0.09
SMARCAL1-213ENST00000496037 PEAK1Q9H792 1746 aa14.49□□□□□ -0.09
SMARCAL1-213ENST00000496037 POTEHQ6S545 545 aa14.48□□□□□ -0.09
SMARCAL1-213ENST00000496037 POGKQ9P215 609 aa14.48□□□□□ -0.09
SMARCAL1-213ENST00000496037 ATP7BP35670 1465 aa14.48□□□□□ -0.09
SMARCAL1-213ENST00000496037 TXNRD1Q16881 649 aa14.47□□□□□ -0.09
SMARCAL1-213ENST00000496037 PROM2Q8N271 834 aa14.47□□□□□ -0.09
SMARCAL1-213ENST00000496037 DDB1Q16531 1140 aa14.46□□□□□ -0.09
SMARCAL1-213ENST00000496037 GPBP1L1Q9HC44 474 aaPredicted RBP14.46□□□□□ -0.09
SMARCAL1-213ENST00000496037 ATP10DQ9P241 1426 aa14.46□□□□□ -0.09
SMARCAL1-213ENST00000496037 TULP4Q9NRJ4 1543 aa14.46□□□□□ -0.1
SMARCAL1-213ENST00000496037 SBF2Q86WG5 1849 aa14.45□□□□□ -0.1
SMARCAL1-213ENST00000496037 LRRC37A3O60309 1634 aa14.45□□□□□ -0.1
SMARCAL1-213ENST00000496037 PLCB2Q00722 1185 aa14.45□□□□□ -0.1
SMARCAL1-213ENST00000496037 PRKCSHP14314 528 aaPredicted RBP14.44□□□□□ -0.1
SMARCAL1-213ENST00000496037 NUTM2GQ5VZR2 741 aa14.44□□□□□ -0.1
SMARCAL1-213ENST00000496037 PTF1AQ7RTS3 328 aa14.44□□□□□ -0.1
SMARCAL1-213ENST00000496037 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
SMARCAL1-213ENST00000496037 PRR36Q9H6K5 1346 aa14.43□□□□□ -0.1
SMARCAL1-213ENST00000496037 CRB1P82279 1406 aa14.43□□□□□ -0.1
SMARCAL1-213ENST00000496037 GRIN3BO60391 1043 aa14.43□□□□□ -0.1
SMARCAL1-213ENST00000496037 LMO7Q8WWI1 1683 aa14.42□□□□□ -0.1
SMARCAL1-213ENST00000496037 SPATA31E1Q6ZUB1 1445 aa14.42□□□□□ -0.1
SMARCAL1-213ENST00000496037 POLD1P28340 1107 aa14.42□□□□□ -0.1
SMARCAL1-213ENST00000496037 FKBP8Q14318 412 aa14.42□□□□□ -0.1
SMARCAL1-213ENST00000496037 C14orf93Q9H972 538 aaKnown RBP14.42□□□□□ -0.1
SMARCAL1-213ENST00000496037 TAOK2Q9UL54 1235 aa14.42□□□□□ -0.1
SMARCAL1-213ENST00000496037 CPDO75976 1380 aa14.42□□□□□ -0.1
SMARCAL1-213ENST00000496037 COL5A2P05997 1499 aaPredicted RBP14.42□□□□□ -0.1
SMARCAL1-213ENST00000496037 AATKQ6ZMQ8 1374 aa14.41□□□□□ -0.1
SMARCAL1-213ENST00000496037 BCL9O00512 1426 aa14.41□□□□□ -0.1
SMARCAL1-213ENST00000496037 MINK1Q8N4C8 1332 aaPredicted RBP14.4□□□□□ -0.1
SMARCAL1-213ENST00000496037 TOPAZ1Q8N9V7 1692 aa14.39□□□□□ -0.11
SMARCAL1-213ENST00000496037 WASLO00401 505 aaPredicted RBP14.38□□□□□ -0.11
SMARCAL1-213ENST00000496037 CFAP70Q5T0N1 1121 aa14.38□□□□□ -0.11
SMARCAL1-213ENST00000496037 ZNF526Q8TF50 670 aaPredicted RBP14.38□□□□□ -0.11
SMARCAL1-213ENST00000496037 ITSN1Q15811 1721 aa14.38□□□□□ -0.11
SMARCAL1-213ENST00000496037 MARCH10Q8NA82 808 aaPredicted RBP14.37□□□□□ -0.11
SMARCAL1-213ENST00000496037 NLGN2Q8NFZ4 835 aa14.37□□□□□ -0.11
SMARCAL1-213ENST00000496037 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
SMARCAL1-213ENST00000496037 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMARCAL1-213ENST00000496037 APLP1P51693 650 aa14.36□□□□□ -0.11
SMARCAL1-213ENST00000496037 TOM1L2Q6ZVM7 507 aa14.36□□□□□ -0.11
SMARCAL1-213ENST00000496037 PIP4P2Q8N4L2 257 aa14.36□□□□□ -0.11
SMARCAL1-213ENST00000496037 PAPPAQ13219 1627 aa14.35□□□□□ -0.11
SMARCAL1-213ENST00000496037 YBX3P16989 372 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMARCAL1-213ENST00000496037 ABTB2Q8N961 1025 aa14.35□□□□□ -0.11
SMARCAL1-213ENST00000496037 SLC16A10Q8TF71 515 aa14.35□□□□□ -0.11
SMARCAL1-213ENST00000496037 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
SMARCAL1-213ENST00000496037 ZBTB7CA1YPR0 619 aa14.34□□□□□ -0.11
SMARCAL1-213ENST00000496037 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
SMARCAL1-213ENST00000496037 USP19O94966 1318 aa14.34□□□□□ -0.11
SMARCAL1-213ENST00000496037 PRELPP51888 382 aa14.33□□□□□ -0.12
SMARCAL1-213ENST00000496037 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
SMARCAL1-213ENST00000496037 WNK3Q9BYP7 1800 aa14.32□□□□□ -0.12
SMARCAL1-213ENST00000496037 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
SMARCAL1-213ENST00000496037 COL13A1Q5TAT6 717 aaPredicted RBP14.32□□□□□ -0.12
SMARCAL1-213ENST00000496037 TNS4Q8IZW8 715 aa14.32□□□□□ -0.12
SMARCAL1-213ENST00000496037 ADCY9O60503 1353 aa14.32□□□□□ -0.12
SMARCAL1-213ENST00000496037 GCP02774 474 aa14.31□□□□□ -0.12
SMARCAL1-213ENST00000496037 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
SMARCAL1-213ENST00000496037 NUDT16Q96DE0 195 aaKnown RBP14.31□□□□□ -0.12
SMARCAL1-213ENST00000496037 POLR3AO14802 1390 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-213ENST00000496037 BRD4O60885 1362 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-213ENST00000496037 NHSQ6T4R5 1651 aa14.3□□□□□ -0.12
SMARCAL1-213ENST00000496037 ACEP12821 1306 aa14.29□□□□□ -0.12
SMARCAL1-213ENST00000496037 EXOC5O00471 708 aa14.28□□□□□ -0.12
SMARCAL1-213ENST00000496037 ADGRB1O14514 1584 aa14.28□□□□□ -0.12
SMARCAL1-213ENST00000496037 SLC34A2O95436 690 aa14.28□□□□□ -0.12
SMARCAL1-213ENST00000496037 WDR17Q8IZU2 1322 aa14.28□□□□□ -0.12
SMARCAL1-213ENST00000496037 DNAJC5GQ8N7S2 189 aa14.27□□□□□ -0.13
SMARCAL1-213ENST00000496037 COL24A1Q17RW2 1714 aa14.27□□□□□ -0.13
SMARCAL1-213ENST00000496037 TNS2Q63HR2 1409 aa14.26□□□□□ -0.13
SMARCAL1-213ENST00000496037 KIF3CO14782 793 aa14.26□□□□□ -0.13
SMARCAL1-213ENST00000496037 ACSBG1Q96GR2 724 aa14.26□□□□□ -0.13
SMARCAL1-213ENST00000496037 QSER1Q2KHR3 1735 aa14.25□□□□□ -0.13
SMARCAL1-213ENST00000496037 CSB-PGBD3P0DP91 1061 aa14.25□□□□□ -0.13
SMARCAL1-213ENST00000496037 TFCP2L1Q9NZI6 479 aa14.25□□□□□ -0.13
SMARCAL1-213ENST00000496037 PNPLA7Q6ZV29 1317 aa14.24□□□□□ -0.13
SMARCAL1-213ENST00000496037 USP6P35125 1406 aa14.24□□□□□ -0.13
SMARCAL1-213ENST00000496037 LRRC4BQ9NT99 713 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms