RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 CAMKK2Q96RR4 588 aa25.67■■□□□ 1.7
YIPF4-204ENST00000495355 RREB1Q92766 1687 aa25.67■■□□□ 1.7
YIPF4-204ENST00000495355 TRIM26Q12899 539 aaPredicted RBP25.66■■□□□ 1.7
YIPF4-204ENST00000495355 PDE3BQ13370 1112 aa25.66■■□□□ 1.7
YIPF4-204ENST00000495355 USP31Q70CQ4 1352 aa25.66■■□□□ 1.7
YIPF4-204ENST00000495355 WDR17Q8IZU2 1322 aa25.65■■□□□ 1.7
YIPF4-204ENST00000495355 SOX12O15370 315 aa25.65■■□□□ 1.7
YIPF4-204ENST00000495355 KCNH5Q8NCM2 988 aa25.64■■□□□ 1.7
YIPF4-204ENST00000495355 TESK2Q96S53 571 aa25.64■■□□□ 1.7
YIPF4-204ENST00000495355 SLC12A5Q9H2X9 1139 aa25.64■■□□□ 1.7
YIPF4-204ENST00000495355 NUP188Q5SRE5 1749 aa25.63■■□□□ 1.69
YIPF4-204ENST00000495355 ABCC6O95255 1503 aa25.63■■□□□ 1.69
YIPF4-204ENST00000495355 NME9Q86XW9 330 aa25.62■■□□□ 1.69
YIPF4-204ENST00000495355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.62■■□□□ 1.69
YIPF4-204ENST00000495355 SBF2Q86WG5 1849 aa25.62■■□□□ 1.69
YIPF4-204ENST00000495355 A0A1W2PP64 1363 aa25.61■■□□□ 1.69
YIPF4-204ENST00000495355 TOM1L2Q6ZVM7 507 aa25.61■■□□□ 1.69
YIPF4-204ENST00000495355 APBA3O96018 575 aa25.6■■□□□ 1.69
YIPF4-204ENST00000495355 PIAS4Q8N2W9 510 aaPredicted RBP25.59■■□□□ 1.69
YIPF4-204ENST00000495355 EDC4Q6P2E9 1401 aaKnown RBP25.59■■□□□ 1.69
YIPF4-204ENST00000495355 LTN1O94822 1766 aa25.59■■□□□ 1.69
YIPF4-204ENST00000495355 OVOS2A0A0G2JMS6 1433 aa25.58■■□□□ 1.69
YIPF4-204ENST00000495355 OVOS2A0A0J9YW53 1432 aa25.58■■□□□ 1.69
YIPF4-204ENST00000495355 OVOS2Q6IE36 1432 aa25.58■■□□□ 1.69
YIPF4-204ENST00000495355 R3HDM1Q15032 1099 aaKnown RBP25.58■■□□□ 1.69
YIPF4-204ENST00000495355 TMC1Q8TDI8 760 aa25.58■■□□□ 1.69
YIPF4-204ENST00000495355 PARD3Q8TEW0 1356 aa25.57■■□□□ 1.68
YIPF4-204ENST00000495355 ST20-MTHFSA0A0A6YYL1 179 aa25.57■■□□□ 1.68
YIPF4-204ENST00000495355 PUS7Q96PZ0 661 aaKnown RBP25.57■■□□□ 1.68
YIPF4-204ENST00000495355 CARD10Q9BWT7 1032 aa25.55■■□□□ 1.68
YIPF4-204ENST00000495355 DDB1Q16531 1140 aa25.54■■□□□ 1.68
YIPF4-204ENST00000495355 PTF1AQ7RTS3 328 aa25.54■■□□□ 1.68
YIPF4-204ENST00000495355 HDGFL2Q7Z4V5 671 aaPredicted RBP25.53■■□□□ 1.68
YIPF4-204ENST00000495355 MARCH10Q8NA82 808 aaPredicted RBP25.53■■□□□ 1.68
YIPF4-204ENST00000495355 RGPD3A6NKT7 1758 aaPredicted RBP25.51■■□□□ 1.67
YIPF4-204ENST00000495355 RGPD4Q7Z3J3 1758 aa25.51■■□□□ 1.67
YIPF4-204ENST00000495355 ERBB3P21860 1342 aa25.51■■□□□ 1.67
YIPF4-204ENST00000495355 BCL9O00512 1426 aa25.51■■□□□ 1.67
YIPF4-204ENST00000495355 CSB-PGBD3P0DP91 1061 aa25.5■■□□□ 1.67
YIPF4-204ENST00000495355 TERF2IPQ9NYB0 399 aa25.49■■□□□ 1.67
YIPF4-204ENST00000495355 CCDC7Q96M83 1385 aa25.48■■□□□ 1.67
YIPF4-204ENST00000495355 NINLQ9Y2I6 1382 aa25.48■■□□□ 1.67
YIPF4-204ENST00000495355 CDCA7Q9BWT1 371 aaPredicted RBP25.48■■□□□ 1.67
YIPF4-204ENST00000495355 TNS2Q63HR2 1409 aa25.47■■□□□ 1.67
YIPF4-204ENST00000495355 POTEDQ86YR6 584 aa25.47■■□□□ 1.67
YIPF4-204ENST00000495355 USP47Q96K76 1375 aa25.46■■□□□ 1.67
YIPF4-204ENST00000495355 C11orf95C9JLR9 678 aaPredicted RBP25.46■■□□□ 1.67
YIPF4-204ENST00000495355 BCL11BQ9C0K0 894 aaPredicted RBP25.43■■□□□ 1.66
YIPF4-204ENST00000495355 PLSCR1O15162 318 aa25.42■■□□□ 1.66
YIPF4-204ENST00000495355 ANKRD24Q8TF21 1146 aa25.42■■□□□ 1.66
YIPF4-204ENST00000495355 ANKRD36BQ8N2N9 1353 aa25.42■■□□□ 1.66
YIPF4-204ENST00000495355 FBLN1P23142 703 aa25.4■■□□□ 1.66
YIPF4-204ENST00000495355 PROM2Q8N271 834 aa25.4■■□□□ 1.66
YIPF4-204ENST00000495355 NLRP2Q9NX02 1062 aa25.4■■□□□ 1.66
YIPF4-204ENST00000495355 NHSQ6T4R5 1651 aa25.39■■□□□ 1.66
YIPF4-204ENST00000495355 EXOC5O00471 708 aa25.39■■□□□ 1.66
YIPF4-204ENST00000495355 ANO8Q9HCE9 1232 aaPredicted RBP25.39■■□□□ 1.66
YIPF4-204ENST00000495355 MYOM1P52179 1685 aa25.39■■□□□ 1.65
YIPF4-204ENST00000495355 IP6K1Q92551 441 aa25.38■■□□□ 1.65
YIPF4-204ENST00000495355 FAM208AQ9UK61 1670 aaKnown RBP25.37■■□□□ 1.65
YIPF4-204ENST00000495355 MAP3K19Q56UN5 1328 aa25.37■■□□□ 1.65
YIPF4-204ENST00000495355 KCNQ2O43526 872 aa25.36■■□□□ 1.65
YIPF4-204ENST00000495355 RGPD2P0DJD1 1756 aa25.36■■□□□ 1.65
YIPF4-204ENST00000495355 SLC24A1O60721 1099 aa25.35■■□□□ 1.65
YIPF4-204ENST00000495355 IL2RBP14784 551 aa25.35■■□□□ 1.65
YIPF4-204ENST00000495355 NBPF14Q5TI25 921 aa25.35■■□□□ 1.65
YIPF4-204ENST00000495355 CASZ1Q86V15 1759 aa25.35■■□□□ 1.65
YIPF4-204ENST00000495355 TMF1P82094 1093 aa25.34■■□□□ 1.65
YIPF4-204ENST00000495355 COG3Q96JB2 828 aa25.33■■□□□ 1.65
YIPF4-204ENST00000495355 FYB1O15117 783 aa25.32■■□□□ 1.64
YIPF4-204ENST00000495355 HOXC9P31274 260 aa25.32■■□□□ 1.64
YIPF4-204ENST00000495355 SHANK3Q9BYB0 1731 aa25.31■■□□□ 1.64
YIPF4-204ENST00000495355 KIF20BQ96Q89 1820 aa25.3■■□□□ 1.64
YIPF4-204ENST00000495355 LTV1Q96GA3 475 aaPredicted RBP25.3■■□□□ 1.64
YIPF4-204ENST00000495355 ACSBG1Q96GR2 724 aa25.3■■□□□ 1.64
YIPF4-204ENST00000495355 BTAF1O14981 1849 aa25.3■■□□□ 1.64
YIPF4-204ENST00000495355 PDGFDQ9GZP0 370 aaPredicted RBP25.29■■□□□ 1.64
YIPF4-204ENST00000495355 GGNBP2Q9H3C7 697 aa25.29■■□□□ 1.64
YIPF4-204ENST00000495355 TXNRD1Q16881 649 aa25.28■■□□□ 1.64
YIPF4-204ENST00000495355 PAPPAQ13219 1627 aa25.27■■□□□ 1.64
YIPF4-204ENST00000495355 ADRA2BP18089 450 aa25.27■■□□□ 1.64
YIPF4-204ENST00000495355 RRS1Q15050 365 aaKnown RBP25.27■■□□□ 1.64
YIPF4-204ENST00000495355 TIMELESSQ9UNS1 1208 aa25.27■■□□□ 1.64
YIPF4-204ENST00000495355 CLSPNQ9HAW4 1339 aa25.27■■□□□ 1.64
YIPF4-204ENST00000495355 CARD14Q9BXL6 1004 aa25.26■■□□□ 1.63
YIPF4-204ENST00000495355 RTL1A6NKG5 1358 aa25.26■■□□□ 1.63
YIPF4-204ENST00000495355 MEGF6O75095 1541 aa25.26■■□□□ 1.63
YIPF4-204ENST00000495355 PCGF6Q9BYE7 350 aa25.24■■□□□ 1.63
YIPF4-204ENST00000495355 AMPHP49418 695 aa25.23■■□□□ 1.63
YIPF4-204ENST00000495355 NSD3Q9BZ95 1437 aa25.2■■□□□ 1.63
YIPF4-204ENST00000495355 DOT1LQ8TEK3 1739 aa25.2■■□□□ 1.63
YIPF4-204ENST00000495355 NBPF6Q5VWK0 638 aa25.2■■□□□ 1.62
YIPF4-204ENST00000495355 NBPF4Q96M43 638 aa25.2■■□□□ 1.62
YIPF4-204ENST00000495355 SPON1Q9HCB6 807 aa25.2■■□□□ 1.62
YIPF4-204ENST00000495355 CDCA8Q53HL2 280 aa25.19■■□□□ 1.62
YIPF4-204ENST00000495355 SLC15A2Q16348 729 aa25.18■■□□□ 1.62
YIPF4-204ENST00000495355 DDX54Q8TDD1 881 aaKnown RBP25.18■■□□□ 1.62
YIPF4-204ENST00000495355 NSD2O96028 1365 aa25.18■■□□□ 1.62
YIPF4-204ENST00000495355 KAT6BQ8WYB5 2073 aa25.17■■□□□ 1.62
YIPF4-204ENST00000495355 USHBP1Q8N6Y0 703 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms