RNA–Protein interactions for RNA: ENST00000494367.1

HLA-J-203, Transcript of major histocompatibility complex, class I, J (pseudogene), humanhuman

BASIC

Gene HLA-J, Length 1,087 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-J-203ENST00000494367 C11orf95C9JLR9 678 aaPredicted RBP23.47■■□□□ 1.35
HLA-J-203ENST00000494367 PLSCR1O15162 318 aa23.47■■□□□ 1.35
HLA-J-203ENST00000494367 EVA1CP58658 441 aa23.47■■□□□ 1.35
HLA-J-203ENST00000494367 BCL11BQ9C0K0 894 aaPredicted RBP23.46■■□□□ 1.35
HLA-J-203ENST00000494367 SBF2Q86WG5 1849 aa23.45■■□□□ 1.34
HLA-J-203ENST00000494367 LMO7Q8WWI1 1683 aa23.45■■□□□ 1.34
HLA-J-203ENST00000494367 NLRP6P59044 892 aa23.45■■□□□ 1.34
HLA-J-203ENST00000494367 PARP4Q9UKK3 1724 aaKnown RBP23.45■■□□□ 1.34
HLA-J-203ENST00000494367 SBNO2Q9Y2G9 1366 aa23.44■■□□□ 1.34
HLA-J-203ENST00000494367 TCP11L2Q8N4U5 519 aa23.43■■□□□ 1.34
HLA-J-203ENST00000494367 LARP1Q6PKG0 1096 aaKnown RBP23.42■■□□□ 1.34
HLA-J-203ENST00000494367 CARD11Q9BXL7 1154 aa23.42■■□□□ 1.34
HLA-J-203ENST00000494367 SHANK3Q9BYB0 1731 aa23.42■■□□□ 1.34
HLA-J-203ENST00000494367 PEAK1Q9H792 1746 aa23.42■■□□□ 1.34
HLA-J-203ENST00000494367 OVOS2A0A0G2JMS6 1433 aa23.42■■□□□ 1.34
HLA-J-203ENST00000494367 OVOS2A0A0J9YW53 1432 aa23.42■■□□□ 1.34
HLA-J-203ENST00000494367 CPSF1Q10570 1443 aaKnown RBP23.42■■□□□ 1.34
HLA-J-203ENST00000494367 OVOS2Q6IE36 1432 aa23.42■■□□□ 1.34
HLA-J-203ENST00000494367 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
HLA-J-203ENST00000494367 GPR162Q16538 588 aa23.41■■□□□ 1.34
HLA-J-203ENST00000494367 SLIT3O75094 1523 aa23.41■■□□□ 1.34
HLA-J-203ENST00000494367 TTC21BQ7Z4L5 1316 aa23.4■■□□□ 1.34
HLA-J-203ENST00000494367 MTFR1LQ9H019 292 aa23.4■■□□□ 1.34
HLA-J-203ENST00000494367 THRAP3Q9Y2W1 955 aaKnown RBP23.4■■□□□ 1.34
HLA-J-203ENST00000494367 AATKQ6ZMQ8 1374 aa23.4■■□□□ 1.34
HLA-J-203ENST00000494367 STK32BQ9NY57 414 aa23.39■■□□□ 1.33
HLA-J-203ENST00000494367 AKAP12Q02952 1782 aa23.39■■□□□ 1.33
HLA-J-203ENST00000494367 TONSLQ96HA7 1378 aa23.39■■□□□ 1.33
HLA-J-203ENST00000494367 TTC21AQ8NDW8 1320 aa23.38■■□□□ 1.33
HLA-J-203ENST00000494367 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
HLA-J-203ENST00000494367 COL5A2P05997 1499 aaPredicted RBP23.37■■□□□ 1.33
HLA-J-203ENST00000494367 GOLGB1Q14789 3259 aaKnown RBP23.37■■□□□ 1.33
HLA-J-203ENST00000494367 SGIP1Q9BQI5 828 aa23.37■■□□□ 1.33
HLA-J-203ENST00000494367 MAP3K5Q99683 1374 aa23.37■■□□□ 1.33
HLA-J-203ENST00000494367 ARXQ96QS3 562 aa23.36■■□□□ 1.33
HLA-J-203ENST00000494367 KCNH5Q8NCM2 988 aa23.35■■□□□ 1.33
HLA-J-203ENST00000494367 SLC15A2Q16348 729 aa23.34■■□□□ 1.33
HLA-J-203ENST00000494367 ARHGEF25Q86VW2 580 aa23.34■■□□□ 1.33
HLA-J-203ENST00000494367 PROM2Q8N271 834 aa23.34■■□□□ 1.33
HLA-J-203ENST00000494367 PUS7Q96PZ0 661 aaKnown RBP23.34■■□□□ 1.33
HLA-J-203ENST00000494367 COL18A1P39060 1754 aa23.34■■□□□ 1.33
HLA-J-203ENST00000494367 KTN1Q86UP2 1357 aaKnown RBP23.33■■□□□ 1.33
HLA-J-203ENST00000494367 CRB1P82279 1406 aa23.33■■□□□ 1.32
HLA-J-203ENST00000494367 AXIN2Q9Y2T1 843 aa23.32■■□□□ 1.32
HLA-J-203ENST00000494367 LRRC37A3O60309 1634 aa23.3■■□□□ 1.32
HLA-J-203ENST00000494367 PTF1AQ7RTS3 328 aa23.3■■□□□ 1.32
HLA-J-203ENST00000494367 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
HLA-J-203ENST00000494367 CD163L1Q9NR16 1453 aa23.29■■□□□ 1.32
HLA-J-203ENST00000494367 USP31Q70CQ4 1352 aa23.28■■□□□ 1.32
HLA-J-203ENST00000494367 MON2Q7Z3U7 1717 aa23.28■■□□□ 1.32
HLA-J-203ENST00000494367 ZBTB7CA1YPR0 619 aa23.28■■□□□ 1.32
HLA-J-203ENST00000494367 HSPA6P17066 643 aa23.28■■□□□ 1.32
HLA-J-203ENST00000494367 TXNRD1Q16881 649 aa23.28■■□□□ 1.32
HLA-J-203ENST00000494367 SLC12A5Q9H2X9 1139 aa23.27■■□□□ 1.32
HLA-J-203ENST00000494367 WDR17Q8IZU2 1322 aa23.27■■□□□ 1.32
HLA-J-203ENST00000494367 SLC24A1O60721 1099 aa23.26■■□□□ 1.31
HLA-J-203ENST00000494367 TOM1L2Q6ZVM7 507 aa23.26■■□□□ 1.31
HLA-J-203ENST00000494367 TESK2Q96S53 571 aa23.26■■□□□ 1.31
HLA-J-203ENST00000494367 NFAT5O94916 1531 aa23.24■■□□□ 1.31
HLA-J-203ENST00000494367 DDB1Q16531 1140 aa23.24■■□□□ 1.31
HLA-J-203ENST00000494367 HDGFL2Q7Z4V5 671 aaPredicted RBP23.24■■□□□ 1.31
HLA-J-203ENST00000494367 TMC1Q8TDI8 760 aa23.24■■□□□ 1.31
HLA-J-203ENST00000494367 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
HLA-J-203ENST00000494367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.23■■□□□ 1.31
HLA-J-203ENST00000494367 KLHL34Q8N239 644 aa23.23■■□□□ 1.31
HLA-J-203ENST00000494367 USP54Q70EL1 1684 aa23.22■■□□□ 1.31
HLA-J-203ENST00000494367 CDCA7Q9BWT1 371 aaPredicted RBP23.22■■□□□ 1.31
HLA-J-203ENST00000494367 CARD10Q9BWT7 1032 aa23.22■■□□□ 1.31
HLA-J-203ENST00000494367 TERF2IPQ9NYB0 399 aa23.22■■□□□ 1.31
HLA-J-203ENST00000494367 RGPD5Q99666 1765 aa23.22■■□□□ 1.31
HLA-J-203ENST00000494367 SOX12O15370 315 aa23.21■■□□□ 1.31
HLA-J-203ENST00000494367 NME9Q86XW9 330 aa23.21■■□□□ 1.31
HLA-J-203ENST00000494367 ABCC6O95255 1503 aa23.2■■□□□ 1.3
HLA-J-203ENST00000494367 EDC4Q6P2E9 1401 aaKnown RBP23.2■■□□□ 1.3
HLA-J-203ENST00000494367 ATP10DQ9P241 1426 aa23.19■■□□□ 1.3
HLA-J-203ENST00000494367 WNK3Q9BYP7 1800 aa23.19■■□□□ 1.3
HLA-J-203ENST00000494367 BCL9O00512 1426 aa23.17■■□□□ 1.3
HLA-J-203ENST00000494367 A0A1W2PP64 1363 aa23.17■■□□□ 1.3
HLA-J-203ENST00000494367 GPBP1L1Q9HC44 474 aaPredicted RBP23.16■■□□□ 1.3
HLA-J-203ENST00000494367 CSB-PGBD3P0DP91 1061 aa23.15■■□□□ 1.3
HLA-J-203ENST00000494367 MARCH10Q8NA82 808 aaPredicted RBP23.15■■□□□ 1.3
HLA-J-203ENST00000494367 GRIN3BO60391 1043 aa23.14■■□□□ 1.29
HLA-J-203ENST00000494367 TIMELESSQ9UNS1 1208 aa23.14■■□□□ 1.29
HLA-J-203ENST00000494367 PAPPAQ13219 1627 aa23.14■■□□□ 1.29
HLA-J-203ENST00000494367 CCDC7Q96M83 1385 aa23.14■■□□□ 1.29
HLA-J-203ENST00000494367 POLD1P28340 1107 aa23.12■■□□□ 1.29
HLA-J-203ENST00000494367 ERBB3P21860 1342 aa23.11■■□□□ 1.29
HLA-J-203ENST00000494367 EXOC5O00471 708 aa23.11■■□□□ 1.29
HLA-J-203ENST00000494367 NLGN2Q8NFZ4 835 aa23.1■■□□□ 1.29
HLA-J-203ENST00000494367 LTN1O94822 1766 aa23.09■■□□□ 1.29
HLA-J-203ENST00000494367 COL24A1Q17RW2 1714 aa23.09■■□□□ 1.29
HLA-J-203ENST00000494367 CAPN15O75808 1086 aa23.09■■□□□ 1.29
HLA-J-203ENST00000494367 CLSPNQ9HAW4 1339 aa23.08■■□□□ 1.29
HLA-J-203ENST00000494367 YBX3P16989 372 aaKnown RBP eCLIP23.08■■□□□ 1.29
HLA-J-203ENST00000494367 TMF1P82094 1093 aa23.08■■□□□ 1.29
HLA-J-203ENST00000494367 USP47Q96K76 1375 aa23.08■■□□□ 1.29
HLA-J-203ENST00000494367 IP6K1Q92551 441 aa23.07■■□□□ 1.28
HLA-J-203ENST00000494367 NHSQ6T4R5 1651 aa23.06■■□□□ 1.28
HLA-J-203ENST00000494367 ANKRD36BQ8N2N9 1353 aa23.06■■□□□ 1.28
HLA-J-203ENST00000494367 ANKRD24Q8TF21 1146 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms