RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 TOM1L2Q6ZVM7 507 aa30.43■■■□□ 2.46
HPS3-207ENST00000494327 CSB-PGBD3P0DP91 1061 aa30.42■■■□□ 2.46
HPS3-207ENST00000494327 BARGINQ6ZT62 677 aa30.41■■■□□ 2.46
HPS3-207ENST00000494327 OVOS2A0A0J9YW53 1432 aa30.4■■■□□ 2.46
HPS3-207ENST00000494327 OVOS2Q6IE36 1432 aa30.4■■■□□ 2.46
HPS3-207ENST00000494327 CRB1P82279 1406 aa30.39■■■□□ 2.46
HPS3-207ENST00000494327 COL18A1P39060 1754 aa30.39■■■□□ 2.46
HPS3-207ENST00000494327 FAM182BQ5T319 152 aa30.39■■■□□ 2.46
HPS3-207ENST00000494327 GGNBP2Q9H3C7 697 aa30.39■■■□□ 2.46
HPS3-207ENST00000494327 THRAP3Q9Y2W1 955 aaKnown RBP30.38■■■□□ 2.45
HPS3-207ENST00000494327 WDR17Q8IZU2 1322 aa30.38■■■□□ 2.45
HPS3-207ENST00000494327 USP54Q70EL1 1684 aa30.37■■■□□ 2.45
HPS3-207ENST00000494327 FYB1O15117 783 aa30.37■■■□□ 2.45
HPS3-207ENST00000494327 CCDC125Q86Z20 511 aa30.36■■■□□ 2.45
HPS3-207ENST00000494327 CARD14Q9BXL6 1004 aa30.36■■■□□ 2.45
HPS3-207ENST00000494327 THSD7AQ9UPZ6 1657 aa30.35■■■□□ 2.45
HPS3-207ENST00000494327 FBLN1P23142 703 aa30.34■■■□□ 2.45
HPS3-207ENST00000494327 PDE3BQ13370 1112 aa30.33■■■□□ 2.45
HPS3-207ENST00000494327 MYOM1P52179 1685 aa30.32■■■□□ 2.44
HPS3-207ENST00000494327 NSD3Q9BZ95 1437 aa30.31■■■□□ 2.44
HPS3-207ENST00000494327 SF3B2Q13435 895 aaKnown RBP30.31■■■□□ 2.44
HPS3-207ENST00000494327 RGPD5Q99666 1765 aa30.31■■■□□ 2.44
HPS3-207ENST00000494327 C11orf95C9JLR9 678 aaPredicted RBP30.3■■■□□ 2.44
HPS3-207ENST00000494327 BLMP54132 1417 aaPredicted RBP30.3■■■□□ 2.44
HPS3-207ENST00000494327 CARD10Q9BWT7 1032 aa30.29■■■□□ 2.44
HPS3-207ENST00000494327 ANKRD24Q8TF21 1146 aa30.28■■■□□ 2.44
HPS3-207ENST00000494327 MAP3K19Q56UN5 1328 aa30.27■■■□□ 2.44
HPS3-207ENST00000494327 AMPHP49418 695 aa30.27■■■□□ 2.44
HPS3-207ENST00000494327 IP6K1Q92551 441 aa30.27■■■□□ 2.44
HPS3-207ENST00000494327 NLRP2Q9NX02 1062 aa30.27■■■□□ 2.44
HPS3-207ENST00000494327 ABCC6O95255 1503 aa30.27■■■□□ 2.44
HPS3-207ENST00000494327 LTN1O94822 1766 aa30.26■■■□□ 2.44
HPS3-207ENST00000494327 LTV1Q96GA3 475 aaPredicted RBP30.26■■■□□ 2.43
HPS3-207ENST00000494327 ERBB3P21860 1342 aa30.25■■■□□ 2.43
HPS3-207ENST00000494327 EP400Q96L91 3159 aa30.25■■■□□ 2.43
HPS3-207ENST00000494327 RRS1Q15050 365 aaKnown RBP30.25■■■□□ 2.43
HPS3-207ENST00000494327 FAM196AQ6ZSG2 479 aa30.24■■■□□ 2.43
HPS3-207ENST00000494327 DEFB132Q7Z7B7 95 aa30.24■■■□□ 2.43
HPS3-207ENST00000494327 PANK3Q9H999 370 aa30.23■■■□□ 2.43
HPS3-207ENST00000494327 HOXC9P31274 260 aa30.22■■■□□ 2.43
HPS3-207ENST00000494327 DDB1Q16531 1140 aa30.22■■■□□ 2.43
HPS3-207ENST00000494327 CGNL1Q0VF96 1302 aa30.22■■■□□ 2.43
HPS3-207ENST00000494327 CCDC7Q96M83 1385 aa30.2■■■□□ 2.43
HPS3-207ENST00000494327 CDCA7Q9BWT1 371 aaPredicted RBP30.2■■■□□ 2.43
HPS3-207ENST00000494327 KIF20BQ96Q89 1820 aa30.19■■■□□ 2.42
HPS3-207ENST00000494327 TRIM37O94972 964 aa30.18■■■□□ 2.42
HPS3-207ENST00000494327 PARP4Q9UKK3 1724 aaKnown RBP30.16■■■□□ 2.42
HPS3-207ENST00000494327 BAG6P46379 1132 aa30.16■■■□□ 2.42
HPS3-207ENST00000494327 KIF7Q2M1P5 1343 aa30.16■■■□□ 2.42
HPS3-207ENST00000494327 EXOC5O00471 708 aa30.14■■■□□ 2.42
HPS3-207ENST00000494327 DISP2A7MBM2 1401 aa30.13■■■□□ 2.41
HPS3-207ENST00000494327 RTL1A6NKG5 1358 aa30.12■■■□□ 2.41
HPS3-207ENST00000494327 PPM1GO15355 546 aaPredicted RBP30.11■■■□□ 2.41
HPS3-207ENST00000494327 IL2RBP14784 551 aa30.11■■■□□ 2.41
HPS3-207ENST00000494327 LRRC37A3O60309 1634 aa30.11■■■□□ 2.41
HPS3-207ENST00000494327 TNNT2P45379 298 aaPredicted RBP30.1■■■□□ 2.41
HPS3-207ENST00000494327 EN1Q05925 392 aaPredicted RBP30.1■■■□□ 2.41
HPS3-207ENST00000494327 MARCH10Q8NA82 808 aaPredicted RBP30.1■■■□□ 2.41
HPS3-207ENST00000494327 EMILIN1Q9Y6C2 1016 aa30.1■■■□□ 2.41
HPS3-207ENST00000494327 HSP90AB2PQ58FF8 381 aa30.09■■■□□ 2.41
HPS3-207ENST00000494327 OVOS2A0A0G2JMS6 1433 aa30.08■■■□□ 2.41
HPS3-207ENST00000494327 APBA3O96018 575 aa30.08■■■□□ 2.41
HPS3-207ENST00000494327 WNK3Q9BYP7 1800 aa30.08■■■□□ 2.41
HPS3-207ENST00000494327 FLT4P35916 1363 aa30.06■■■□□ 2.4
HPS3-207ENST00000494327 RGPD1P0DJD0 1748 aa30.06■■■□□ 2.4
HPS3-207ENST00000494327 KNSTRNQ9Y448 316 aa30.06■■■□□ 2.4
HPS3-207ENST00000494327 SMG6Q86US8 1419 aaKnown RBP30.04■■■□□ 2.4
HPS3-207ENST00000494327 INSRP06213 1382 aa30.03■■■□□ 2.4
HPS3-207ENST00000494327 NBPF6Q5VWK0 638 aa30.03■■■□□ 2.4
HPS3-207ENST00000494327 NBPF4Q96M43 638 aa30.03■■■□□ 2.4
HPS3-207ENST00000494327 USHBP1Q8N6Y0 703 aa30.02■■■□□ 2.4
HPS3-207ENST00000494327 KIF24Q5T7B8 1368 aa30.02■■■□□ 2.4
HPS3-207ENST00000494327 EZH2Q15910 746 aaKnown RBP30.01■■■□□ 2.39
HPS3-207ENST00000494327 POLKQ9UBT6 870 aa30.01■■■□□ 2.39
HPS3-207ENST00000494327 TNS2Q63HR2 1409 aa30.01■■■□□ 2.39
HPS3-207ENST00000494327 PEAK1Q9H792 1746 aa30.01■■■□□ 2.39
HPS3-207ENST00000494327 MORC1Q86VD1 984 aa30■■■□□ 2.39
HPS3-207ENST00000494327 TNS1Q9HBL0 1735 aaKnown RBP29.99■■■□□ 2.39
HPS3-207ENST00000494327 FAM208AQ9UK61 1670 aaKnown RBP29.98■■■□□ 2.39
HPS3-207ENST00000494327 NSD2O96028 1365 aa29.98■■■□□ 2.39
HPS3-207ENST00000494327 WASHC2AQ641Q2 1341 aa29.97■■■□□ 2.39
HPS3-207ENST00000494327 DDX54Q8TDD1 881 aaKnown RBP29.97■■■□□ 2.39
HPS3-207ENST00000494327 CAMKK2Q96RR4 588 aa29.97■■■□□ 2.39
HPS3-207ENST00000494327 PTF1AQ7RTS3 328 aa29.96■■■□□ 2.39
HPS3-207ENST00000494327 RGPD2P0DJD1 1756 aa29.95■■■□□ 2.38
HPS3-207ENST00000494327 BCL11BQ9C0K0 894 aaPredicted RBP29.94■■■□□ 2.38
HPS3-207ENST00000494327 ANKRD26Q9UPS8 1709 aa29.93■■■□□ 2.38
HPS3-207ENST00000494327 RAPGEF4Q8WZA2 1011 aa29.93■■■□□ 2.38
HPS3-207ENST00000494327 ACSBG1Q96GR2 724 aa29.93■■■□□ 2.38
HPS3-207ENST00000494327 BCL9O00512 1426 aa29.92■■■□□ 2.38
HPS3-207ENST00000494327 AMER1Q5JTC6 1135 aaPredicted RBP29.92■■■□□ 2.38
HPS3-207ENST00000494327 ZCRB1Q8TBF4 217 aaKnown RBP29.91■■■□□ 2.38
HPS3-207ENST00000494327 MAP2P11137 1827 aaKnown RBP29.91■■■□□ 2.38
HPS3-207ENST00000494327 MEGF6O75095 1541 aa29.9■■■□□ 2.38
HPS3-207ENST00000494327 PER1O15534 1290 aaPredicted RBP29.89■■■□□ 2.38
HPS3-207ENST00000494327 KCNQ2O43526 872 aa29.89■■■□□ 2.38
HPS3-207ENST00000494327 TATP17735 454 aaPredicted RBP29.89■■■□□ 2.38
HPS3-207ENST00000494327 CNGB1Q14028 1251 aaPredicted RBP29.89■■■□□ 2.38
HPS3-207ENST00000494327 CC2D1BQ5T0F9 858 aaKnown RBP29.87■■■□□ 2.37
HPS3-207ENST00000494327 PARD3Q8TEW0 1356 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms