RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 IL13P35225 146 aa15.22■□□□□ 0.03
MCF2L-231ENST00000494043 ZC3H6P61129 1189 aaKnown RBP15.22■□□□□ 0.03
MCF2L-231ENST00000494043 ADAMTS8Q9UP79 889 aa15.22■□□□□ 0.03
MCF2L-231ENST00000494043 BLMP54132 1417 aaPredicted RBP15.22■□□□□ 0.03
MCF2L-231ENST00000494043 KIAA0232Q92628 1395 aa15.22■□□□□ 0.03
MCF2L-231ENST00000494043 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-231ENST00000494043 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.03
MCF2L-231ENST00000494043 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
MCF2L-231ENST00000494043 COL18A1P39060 1754 aa15.19■□□□□ 0.02
MCF2L-231ENST00000494043 U2SURPO15042 1029 aaKnown RBP15.19■□□□□ 0.02
MCF2L-231ENST00000494043 U2AF1L5P0DN76 240 aaPredicted RBP15.19■□□□□ 0.02
MCF2L-231ENST00000494043 U2AF1Q01081 240 aaKnown RBP eCLIP15.19■□□□□ 0.02
MCF2L-231ENST00000494043 JCADQ9P266 1359 aa15.19■□□□□ 0.02
MCF2L-231ENST00000494043 RGPD1P0DJD0 1748 aa15.18■□□□□ 0.02
MCF2L-231ENST00000494043 LMO7Q8WWI1 1683 aa15.17■□□□□ 0.02
MCF2L-231ENST00000494043 HSPA1LP34931 641 aa15.17■□□□□ 0.02
MCF2L-231ENST00000494043 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
MCF2L-231ENST00000494043 CHRNA2Q15822 529 aa15.16■□□□□ 0.02
MCF2L-231ENST00000494043 AXIN2Q9Y2T1 843 aa15.16■□□□□ 0.02
MCF2L-231ENST00000494043 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
MCF2L-231ENST00000494043 LTV1Q96GA3 475 aaPredicted RBP15.15■□□□□ 0.02
MCF2L-231ENST00000494043 ERBB3P21860 1342 aa15.15■□□□□ 0.02
MCF2L-231ENST00000494043 IGSF1Q8N6C5 1336 aa15.15■□□□□ 0.02
MCF2L-231ENST00000494043 CCDC146Q8IYE0 955 aa15.14■□□□□ 0.01
MCF2L-231ENST00000494043 ANKRD24Q8TF21 1146 aa15.14■□□□□ 0.01
MCF2L-231ENST00000494043 EYA1Q99502 592 aa15.14■□□□□ 0.01
MCF2L-231ENST00000494043 RSPH6AQ9H0K4 717 aa15.14■□□□□ 0.01
MCF2L-231ENST00000494043 COL14A1Q05707 1796 aaKnown RBP15.13■□□□□ 0.01
MCF2L-231ENST00000494043 RGPD5Q99666 1765 aa15.13■□□□□ 0.01
MCF2L-231ENST00000494043 CAMTA1Q9Y6Y1 1673 aa15.13■□□□□ 0.01
MCF2L-231ENST00000494043 FCHSD2O94868 740 aa15.13■□□□□ 0.01
MCF2L-231ENST00000494043 RUNDC1Q96C34 613 aa15.13■□□□□ 0.01
MCF2L-231ENST00000494043 KDRP35968 1356 aa15.12■□□□□ 0.01
MCF2L-231ENST00000494043 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
MCF2L-231ENST00000494043 FAM83GA6ND36 823 aa15.12■□□□□ 0.01
MCF2L-231ENST00000494043 HMOX1P09601 288 aa15.12■□□□□ 0.01
MCF2L-231ENST00000494043 PNNQ9H307 717 aaKnown RBP15.12■□□□□ 0.01
MCF2L-231ENST00000494043 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
MCF2L-231ENST00000494043 SPATA31A6Q5VVP1 1343 aa15.12■□□□□ 0.01
MCF2L-231ENST00000494043 NUTM2BA6NNL0 878 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-231ENST00000494043 NUTM2EB1AL46 878 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-231ENST00000494043 PRKAR2BP31323 418 aa15.11■□□□□ 0.01
MCF2L-231ENST00000494043 SULT6B1Q6IMI4 303 aa15.11■□□□□ 0.01
MCF2L-231ENST00000494043 AEBP1Q8IUX7 1158 aa15.11■□□□□ 0.01
MCF2L-231ENST00000494043 NUTM2AQ8IVF1 878 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-231ENST00000494043 PLEKHF1Q96S99 279 aa15.11■□□□□ 0.01
MCF2L-231ENST00000494043 COL5A2P05997 1499 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-231ENST00000494043 NBPF6Q5VWK0 638 aa15.1■□□□□ 0.01
MCF2L-231ENST00000494043 FBXO41Q8TF61 875 aa15.1■□□□□ 0.01
MCF2L-231ENST00000494043 NBPF4Q96M43 638 aa15.1■□□□□ 0.01
MCF2L-231ENST00000494043 ADAMTS2O95450 1211 aa15.09■□□□□ 0.01
MCF2L-231ENST00000494043 ZBED9Q6R2W3 1325 aa15.09■□□□□ 0.01
MCF2L-231ENST00000494043 MAPK8IP3Q9UPT6 1336 aa15.09■□□□□ 0.01
MCF2L-231ENST00000494043 PLCH1Q4KWH8 1693 aa15.09■□□□□ 0.01
MCF2L-231ENST00000494043 RGPD2P0DJD1 1756 aa15.08■□□□□ 0.01
MCF2L-231ENST00000494043 LRP6O75581 1613 aa15.08■□□□□ 0
MCF2L-231ENST00000494043 APAF1O14727 1248 aa15.08■□□□□ 0
MCF2L-231ENST00000494043 CSB-PGBD3P0DP91 1061 aa15.08■□□□□ 0
MCF2L-231ENST00000494043 USHBP1Q8N6Y0 703 aa15.08■□□□□ 0
MCF2L-231ENST00000494043 WDR17Q8IZU2 1322 aa15.08■□□□□ 0
MCF2L-231ENST00000494043 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
MCF2L-231ENST00000494043 TCP11L2Q8N4U5 519 aa15.07■□□□□ 0
MCF2L-231ENST00000494043 BTG4Q9NY30 223 aa15.07■□□□□ 0
MCF2L-231ENST00000494043 NEFMP07197 916 aa15.06■□□□□ 0
MCF2L-231ENST00000494043 NLRP2Q9NX02 1062 aa15.06■□□□□ 0
MCF2L-231ENST00000494043 NGEFQ8N5V2 710 aa15.05■□□□□ -0
MCF2L-231ENST00000494043 PHACTR3Q96KR7 559 aa15.05■□□□□ -0
MCF2L-231ENST00000494043 SLIT2O94813 1529 aa15.05■□□□□ -0
MCF2L-231ENST00000494043 NRAPQ86VF7 1730 aa15.05■□□□□ -0
MCF2L-231ENST00000494043 NWD2Q9ULI1 1742 aa15.05■□□□□ -0
MCF2L-231ENST00000494043 EVA1CP58658 441 aa15.04■□□□□ -0
MCF2L-231ENST00000494043 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
MCF2L-231ENST00000494043 STRN4Q9NRL3 753 aa15.04■□□□□ -0
MCF2L-231ENST00000494043 CRB1P82279 1406 aa15.03■□□□□ -0
MCF2L-231ENST00000494043 TMPOP42166 694 aaKnown RBP15.03■□□□□ -0
MCF2L-231ENST00000494043 NFE2L2Q16236 605 aa15.03■□□□□ -0
MCF2L-231ENST00000494043 LARP1Q6PKG0 1096 aaKnown RBP15.03■□□□□ -0
MCF2L-231ENST00000494043 TOM1L2Q6ZVM7 507 aa15.03■□□□□ -0
MCF2L-231ENST00000494043 ILDR1Q86SU0 546 aaPredicted RBP15.03■□□□□ -0
MCF2L-231ENST00000494043 RRP7AQ9Y3A4 280 aaKnown RBP15.03■□□□□ -0
MCF2L-231ENST00000494043 SALL2Q9Y467 1007 aaPredicted RBP15.03■□□□□ -0
MCF2L-231ENST00000494043 PLEKHG2Q9H7P9 1386 aa15.02■□□□□ -0
MCF2L-231ENST00000494043 CARD10Q9BWT7 1032 aa15.02■□□□□ -0
MCF2L-231ENST00000494043 ZNF521Q96K83 1311 aa15.01□□□□□ -0.01
MCF2L-231ENST00000494043 NEUROD2Q15784 382 aa15.01□□□□□ -0.01
MCF2L-231ENST00000494043 CCDC27Q2M243 656 aa15.01□□□□□ -0.01
MCF2L-231ENST00000494043 C8orf37Q96NL8 207 aa15.01□□□□□ -0.01
MCF2L-231ENST00000494043 MEGF6O75095 1541 aa15.01□□□□□ -0.01
MCF2L-231ENST00000494043 MEX3CQ5U5Q3 659 aaKnown RBP15□□□□□ -0.01
MCF2L-231ENST00000494043 RAPGEF4Q8WZA2 1011 aa15□□□□□ -0.01
MCF2L-231ENST00000494043 RIPK4P57078 832 aa14.99□□□□□ -0.01
MCF2L-231ENST00000494043 MTHFSDQ2M296 383 aaKnown RBP14.99□□□□□ -0.01
MCF2L-231ENST00000494043 FNBP4Q8N3X1 1017 aaPredicted RBP14.99□□□□□ -0.01
MCF2L-231ENST00000494043 GAS2L2Q8NHY3 880 aa14.99□□□□□ -0.01
MCF2L-231ENST00000494043 NGLY1Q96IV0 654 aa14.99□□□□□ -0.01
MCF2L-231ENST00000494043 BCL9LQ86UU0 1499 aa14.98□□□□□ -0.01
MCF2L-231ENST00000494043 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
MCF2L-231ENST00000494043 TATP17735 454 aaPredicted RBP14.98□□□□□ -0.01
MCF2L-231ENST00000494043 UNC5CLQ8IV45 518 aa14.98□□□□□ -0.01
MCF2L-231ENST00000494043 WWC1Q8IX03 1113 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms